Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g02510 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.5e-74 282.0 134 100.0
Sp7g12150 Schrenkiella parvula HOM05D007693 ORTHO05D002086 1.1e-66 256.5 134 91.8
BraA10t42989Z Brassica rapa HOM05D007693 ORTHO05D002086 3.8e-51 204.9 134 70.1
Thhalv10017745m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.7e-49 198.7 135 69.6
BcaB05g22684 Brassica carinata HOM05D007693 ORTHO05D002086 3.6e-49 198.4 132 70.5
Carub.0003s3077 Capsella rubella HOM05D007693 ORTHO05D002086 5.9e-44 181.0 135 66.7
Thhalv10002853m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 2.3e-43 179.1 120 69.2
Thhalv10022239m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.3e-38 163.3 116 68.1
CARHR055980 Cardamine hirsuta HOM05D007693 ORTHO05D002086 6.4e-38 161.0 111 69.4
BolC4t28282H Brassica oleracea HOM05D007693 ORTHO05D002086 2.7e-36 155.6 134 61.2
CARHR108830 Cardamine hirsuta HOM05D007693 ORTHO05D002086 1.0e-35 153.7 146 56.2
BcaB04g17442 Brassica carinata HOM05D007693 ORTHO05D002086 8.6e-35 150.6 112 65.2
C06p36600 Brassica napus HOM05D007693 ORTHO05D002086 2.5e-34 149.1 129 61.2
BcaB08g35719 Brassica carinata HOM05D007693 ORTHO05D002086 8.9e-32 140.6 115 59.1
AT2G06265 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 4.1e-29 131.7 136 48.5
BcaC01g00556 Brassica carinata HOM05D007693 ORTHO05D002086 4.1e-29 131.7 140 50.0
C07p06000 Brassica napus HOM05D007693 ORTHO05D002086 7.0e-29 131.0 140 49.3
BolC7t41011H Brassica oleracea HOM05D007693 ORTHO05D002086 7.0e-29 131.0 140 49.3
AL1G49470 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.6e-28 129.8 142 49.3
AL9U10420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.6e-28 129.8 142 49.3
Carub.0008s0706 Capsella rubella HOM05D007693 ORTHO05D002086 3.5e-28 128.6 90 62.2
C09p24970 Brassica napus HOM05D007693 ORTHO05D002086 2.3e-27 125.9 140 49.3
AT2G07505 Arabidopsis thaliana HOM05D007693 ORTHO05D002086 1.5e-26 123.2 107 56.1
BcaB02g06468 Brassica carinata HOM05D007693 ORTHO05D002086 3.6e-25 118.6 129 43.4
BcaB04g17832 Brassica carinata HOM05D007693 ORTHO05D002086 2.6e-23 112.5 102 52.9
BcaB04g20521 Brassica carinata HOM05D007693 ORTHO05D002086 1.1e-21 107.1 142 37.3
AL2G18820 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.3e-19 100.1 141 44.0
AL4G16420 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 1.3e-19 100.1 141 44.0
AL22U10020 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 2.3e-19 99.4 141 42.6
Thhalv10003330m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 3.0e-19 99.0 144 38.9
BraA06t25204Z Brassica rapa HOM05D007693 ORTHO05D002086 1.9e-18 96.3 75 52.0
Thhalv10011039m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.9e-18 96.3 130 40.0
BcaB06g26026 Brassica carinata HOM05D007693 ORTHO05D002086 3.3e-18 95.5 142 39.4
Thhalv10012038m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 3.3e-18 95.5 165 35.2
BraA06t24544Z Brassica rapa HOM05D007693 ORTHO05D002086 4.3e-18 95.1 120 44.2
Thhalv10003362m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 4.3e-18 95.1 121 41.3
Thhalv10029337m.g Eutrema salsugineum HOM05D007693 ORTHO05D002086 1.2e-17 93.6 81 51.9
BcaB05g22932 Brassica carinata HOM05D007693 ORTHO05D002086 2.8e-17 92.4 131 42.0
BcaC07g37014 Brassica carinata HOM05D007693 ORTHO05D002086 3.6e-17 92.0 72 54.2
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 3.1e-16 89.0 68 54.4
A04p22190 Brassica napus HOM05D007693 ORTHO05D002086 5.2e-16 88.2 68 55.9
BraA10t43040Z Brassica rapa HOM05D007693 ORTHO05D002086 5.2e-16 88.2 68 55.9
BcaB06g27481 Brassica carinata HOM05D007693 ORTHO05D002086 8.9e-16 87.4 59 61.0
BraA05t22114Z Brassica rapa HOM05D007693 ORTHO05D002086 8.9e-16 87.4 68 55.9
BcaC02g11475 Brassica carinata HOM05D007693 ORTHO05D002086 1.5e-15 86.7 124 39.5
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 3.4e-15 85.5 65 55.4
BcaC06g36209 Brassica carinata HOM05D000977 ORTHO05D002086 5.8e-15 84.7 134 40.3
BcaC06g35712 Brassica carinata HOM05D007693 ORTHO05D002086 7.6e-15 84.3 123 36.6
BolC8t47992H Brassica oleracea HOM05D007693 ORTHO05D002086 1.7e-14 83.2 130 36.2
BcaB05g24592 Brassica carinata HOM05D007693 ORTHO05D002086 3.7e-14 82.0 56 60.7
BcaB06g29566 Brassica carinata HOM05D007693 ORTHO05D002086 3.7e-14 82.0 56 60.7
BcaC05g29744 Brassica carinata HOM05D007693 ORTHO05D002086 3.7e-14 82.0 90 45.6
BcaC06g32504 Brassica carinata HOM05D007693 ORTHO05D002086 3.7e-14 82.0 90 45.6
BcaB04g16994 Brassica carinata HOM05D007693 ORTHO05D002086 4.9e-14 81.6 131 37.4
BolC3t20530H Brassica oleracea HOM05D007693 ORTHO05D002086 8.4e-14 80.9 62 56.5
BcaC05g28311 Brassica carinata HOM05D007693 ORTHO05D002086 3.2e-13 79.0 93 44.1
BcaC08g44290 Brassica carinata HOM05D007693 ORTHO05D002086 3.2e-13 79.0 130 36.2
CARHR033990 Cardamine hirsuta HOM05D007693 ORTHO05D002086 3.2e-13 79.0 59 64.4
BcaB02g10221 Brassica carinata HOM05D007693 ORTHO05D002086 5.4e-13 78.2 93 43.0
BcaC05g28526 Brassica carinata HOM05D000977 ORTHO05D002086 7.1e-13 77.8 129 36.4
Sp6g12290 Schrenkiella parvula HOM05D007693 ORTHO05D002086 7.1e-13 77.8 154 33.1
SpUn1230_0020 Schrenkiella parvula HOM05D007693 ORTHO05D002086 7.1e-13 77.8 126 39.7
BcaC05g25266 Brassica carinata HOM05D007693 ORTHO05D002086 1.6e-12 76.6 93 43.0
Sp5g15320 Schrenkiella parvula HOM05D007693 ORTHO05D002086 2.1e-12 76.3 117 35.0
BcaC03g15315 Brassica carinata HOM05D007693 ORTHO05D002086 7.8e-12 74.3 61 54.1
BcaC03g14636 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-11 73.6 89 42.7
BcaC06g33294 Brassica carinata HOM05D007693 ORTHO05D002086 1.3e-11 73.6 129 34.9
BraA10t43661Z Brassica rapa HOM05D007693 ORTHO05D002086 1.3e-11 73.6 50 58.0
Sp5g21400 Schrenkiella parvula HOM05D018387 ORTHO05D002086 2.3e-11 72.8 95 38.9
BcaB08g34442 Brassica carinata HOM05D007693 ORTHO05D002086 3.0e-11 72.4 70 50.0
BcaC06g36717 Brassica carinata HOM05D000977 ORTHO05D002086 1.5e-10 70.1 131 35.1
C05p36680 Brassica napus HOM05D007693 ORTHO05D002086 3.3e-10 68.9 77 41.6
Sp1g34950 Schrenkiella parvula HOM05D007693 ORTHO05D002086 4.3e-10 68.6 87 41.4
BcaB05g23148 Brassica carinata HOM05D007693 ORTHO05D002086 5.6e-10 68.2 57 47.4
BcaC03g14861 Brassica carinata HOM05D007462 ORTHO05D011074 5.6e-10 68.2 124 32.3
Sp6g08580 Schrenkiella parvula HOM05D018387 ORTHO05D002086 5.6e-10 68.2 141 33.3
AL6G38570 Arabidopsis lyrata HOM05D007693 ORTHO05D002086 7.3e-10 67.8 146 37.7
AT3G30165 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 3.6e-09 65.5 65 41.5
THA.LOC104804713 Tarenaya hassleriana HOM05D007462 ORTHO05D002086 3.6e-09 65.5 68 44.1
Aa31LG2G13790 Aethionema arabicum HOM05D007462 ORTHO05D002086 6.2e-09 64.7 126 30.2
BcaC01g01799 Brassica carinata HOM05D007462 ORTHO05D011074 6.2e-09 64.7 124 31.5
C05p48940 Brassica napus HOM05D007693 ORTHO05D002086 8.1e-09 64.3 77 40.3
BolC1t02623H Brassica oleracea HOM05D007462 ORTHO05D011074 8.1e-09 64.3 122 32.8
BcaC05g26662 Brassica carinata HOM05D007462 ORTHO05D011074 1.1e-08 63.9 98 33.7
BcaB04g18049 Brassica carinata HOM05D007693 ORTHO05D015462 1.4e-08 63.5 87 33.3
BolC5t32402H Brassica oleracea HOM05D007693 ORTHO05D002086 1.4e-08 63.5 77 39.0
BraA05t21229Z Brassica rapa HOM05D007462 ORTHO05D002086 1.4e-08 63.5 76 42.1
BcaC01g02140 Brassica carinata HOM05D007462 ORTHO05D002086 1.8e-08 63.2 68 47.1
BolC3t19061H Brassica oleracea HOM05D007462 ORTHO05D002086 1.8e-08 63.2 68 47.1
BcaB04g17468 Brassica carinata HOM05D007462 ORTHO05D011074 2.4e-08 62.8 103 33.0
BcaB07g33925 Brassica carinata HOM05D000888 ORTHO05D000740 2.4e-08 62.8 57 43.9
BcaC02g11566 Brassica carinata HOM05D007462 ORTHO05D011074 2.4e-08 62.8 123 30.9
Sp7g03170 Schrenkiella parvula HOM05D018387 ORTHO05D002086 3.1e-08 62.4 72 41.7
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 4.0e-08 62.0 57 45.6
BcaC02g07772 Brassica carinata HOM05D007462 ORTHO05D002086 4.0e-08 62.0 68 47.1
BcaC03g14955 Brassica carinata HOM05D007462 ORTHO05D002086 4.0e-08 62.0 68 47.1
BolC2t08565H Brassica oleracea HOM05D007462 ORTHO05D002086 4.0e-08 62.0 68 45.6
Sp7g13130 Schrenkiella parvula HOM05D007693 ORTHO05D002086 4.0e-08 62.0 96 38.5
BcaB06g26931 Brassica carinata HOM05D007693 ORTHO05D015462 5.2e-08 61.6 57 45.6
BcaB07g33915 Brassica carinata HOM05D007693 ORTHO05D015462 6.8e-08 61.2 57 43.9
BolC9t55840H Brassica oleracea HOM05D007693 ORTHO05D002086 8.9e-08 60.8 40 60.0
BcaC01g05867 Brassica carinata HOM05D007462 ORTHO05D011074 1.2e-07 60.5 122 32.0
BcaC04g22910 Brassica carinata HOM05D007462 ORTHO05D011074 1.2e-07 60.5 122 32.0
BcaC07g37477 Brassica carinata HOM05D007462 ORTHO05D002086 1.2e-07 60.5 68 45.6
BcaC07g38352 Brassica carinata HOM05D007462 ORTHO05D011074 1.2e-07 60.5 122 32.0
BolC8t47797H Brassica oleracea HOM05D007462 ORTHO05D002086 1.2e-07 60.5 68 45.6
Sp7g08580 Schrenkiella parvula HOM05D017451 ORTHO05D019359 1.2e-07 60.5 72 36.1
SpUn0135_0020 Schrenkiella parvula HOM05D017451 ORTHO05D019359 1.2e-07 60.5 72 36.1
BcaC01g04891 Brassica carinata HOM05D007462 ORTHO05D011074 1.5e-07 60.1 110 32.7
BcaC04g22963 Brassica carinata HOM05D007462 ORTHO05D011074 1.5e-07 60.1 125 32.0
BcaC05g28653 Brassica carinata HOM05D007462 ORTHO05D011074 1.5e-07 60.1 123 27.6
BolC9t54236H Brassica oleracea HOM05D007462 ORTHO05D011074 1.5e-07 60.1 125 32.0
BcaC01g02056 Brassica carinata HOM05D007462 ORTHO05D002086 2.0e-07 59.7 68 44.1
BcaC06g33699 Brassica carinata HOM05D007462 ORTHO05D011074 2.0e-07 59.7 113 31.9
BcaC07g38572 Brassica carinata HOM05D007462 ORTHO05D011074 2.0e-07 59.7 122 31.1
BcaC08g44148 Brassica carinata HOM05D007462 ORTHO05D011074 2.0e-07 59.7 125 31.2
C08p03150 Brassica napus HOM05D000930 ORTHO05D000748 2.0e-07 59.7 122 34.4
AT1G48285 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 2.6e-07 59.3 68 41.2
AT2G37125 Arabidopsis thaliana HOM05D007462 ORTHO05D011074 2.6e-07 59.3 68 41.2
BcaC02g11886 Brassica carinata HOM05D007462 ORTHO05D002086 2.6e-07 59.3 68 45.6
BcaC03g14143 Brassica carinata HOM05D007462 ORTHO05D011074 2.6e-07 59.3 121 31.4
BcaC08g45815 Brassica carinata HOM05D007462 ORTHO05D011074 2.6e-07 59.3 122 31.1
BolC8t49549H Brassica oleracea HOM05D007693 ORTHO05D002086 2.6e-07 59.3 41 56.1
BcaC08g42872 Brassica carinata HOM05D007462 ORTHO05D011074 4.4e-07 58.5 124 29.8
BcaC06g36483 Brassica carinata HOM05D007462 ORTHO05D002086 5.8e-07 58.2 68 44.1
BolC1t01191H Brassica oleracea HOM05D007462 ORTHO05D002086 5.8e-07 58.2 68 44.1
THA.LOC104810579 Tarenaya hassleriana HOM05D028755 ORTHO05D002086 5.8e-07 58.2 64 37.5
BcaB06g27935 Brassica carinata HOM05D026000 ORTHO05D002086 7.6e-07 57.8 100 37.0
CARHR264280 Cardamine hirsuta HOM05D007462 ORTHO05D011074 1.3e-06 57.0 55 47.3
SpUn1120_0010 Schrenkiella parvula HOM05D017451 ORTHO05D019359 1.3e-06 57.0 72 37.5
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 1.7e-06 56.6 118 31.4
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 2.2e-06 56.2 108 32.4
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 2.2e-06 56.2 108 32.4
Carub.0004s0674 Capsella rubella HOM05D025401 ORTHO05D026774 2.2e-06 56.2 83 39.8
Carub.0006s2597 Capsella rubella HOM05D025401 ORTHO05D026774 2.2e-06 56.2 79 36.7
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 2.9e-06 55.8 68 39.7
BolC6t38706H Brassica oleracea HOM05D000589 ORTHO05D001885 2.9e-06 55.8 68 39.7
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 3.8e-06 55.5 68 41.2
BolC7t43826H Brassica oleracea HOM05D000589 ORTHO05D001885 3.8e-06 55.5 138 31.2
BolC9t57315H Brassica oleracea HOM05D000589 ORTHO05D001885 4.9e-06 55.1 137 29.9
CARHR258030 Cardamine hirsuta HOM05D007462 ORTHO05D011074 4.9e-06 55.1 133 30.1
BcaB05g22170 Brassica carinata HOM05D000589 ORTHO05D001885 6.4e-06 54.7 128 31.2
BcaC08g45577 Brassica carinata HOM05D000589 ORTHO05D001885 6.4e-06 54.7 70 40.0
C01p30550 Brassica napus HOM05D000589 ORTHO05D001885 6.4e-06 54.7 68 39.7
BolC4t25125H Brassica oleracea HOM05D000589 ORTHO05D001885 6.4e-06 54.7 137 29.9
BolC8t49419H Brassica oleracea HOM05D000589 ORTHO05D001885 6.4e-06 54.7 137 29.9
BcaC05g25861 Brassica carinata HOM05D000589 ORTHO05D001885 8.4e-06 54.3 129 27.9
BraA08t34216Z Brassica rapa HOM05D007693 ORTHO05D002086 8.4e-06 54.3 39 53.8


User provided reference genes

Program Settings