Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g02370 Schrenkiella parvula HOM05D008101 ORTHO05D010163 4.2e-51 204.5 113 100.0
A06p40170 Brassica napus HOM05D008101 ORTHO05D010163 2.7e-21 105.5 84 70.2
BraA06t26932Z Brassica rapa HOM05D008101 ORTHO05D010163 2.7e-21 105.5 84 70.2
BcaC06g33664 Brassica carinata HOM05D008101 ORTHO05D010163 5.9e-21 104.4 85 72.9
BcaC06g33665 Brassica carinata HOM05D008101 ORTHO05D010163 5.9e-21 104.4 85 72.9
C07p37940 Brassica napus HOM05D008101 ORTHO05D010163 5.9e-21 104.4 85 72.9
BolC7t44316H Brassica oleracea HOM05D008101 ORTHO05D010163 5.9e-21 104.4 85 72.9
Carub.0007s3631 Capsella rubella HOM05D008101 ORTHO05D010163 1.1e-19 100.1 86 73.3
CARHR152140 Cardamine hirsuta HOM05D008101 ORTHO05D010163 4.3e-19 98.2 84 65.5
AL5G18900 Arabidopsis lyrata HOM05D008101 ORTHO05D010163 1.2e-18 96.7 84 69.0
AT3G29034 Arabidopsis thaliana HOM05D008101 ORTHO05D010163 2.1e-18 95.9 84 65.5
Carub.0005s0764 Capsella rubella HOM05D008101 ORTHO05D010163 6.2e-18 94.4 85 69.4
BcaC03g17658 Brassica carinata HOM05D008101 ORTHO05D010163 8.0e-18 94.0 85 68.2
BcaC06g30874 Brassica carinata HOM05D008101 ORTHO05D010163 8.0e-18 94.0 85 68.2
BolC2t11721H Brassica oleracea HOM05D008101 ORTHO05D010163 8.0e-18 94.0 85 68.2
C02p56620 Brassica napus HOM05D008101 ORTHO05D010163 2.0e-16 89.4 85 64.7
Sp2g17670 Schrenkiella parvula HOM05D008101 ORTHO05D010163 2.6e-16 89.0 84 66.7
BcaB07g30101 Brassica carinata HOM05D008101 ORTHO05D010163 3.4e-16 88.6 85 64.7
A02p36290 Brassica napus HOM05D008101 ORTHO05D010163 5.8e-16 87.8 85 63.5
BraA02t08628Z Brassica rapa HOM05D008101 ORTHO05D010163 5.8e-16 87.8 85 63.5
BolC2t11574H Brassica oleracea HOM05D008101 ORTHO05D010163 9.8e-16 87.0 84 63.1
BcaC03g17547 Brassica carinata HOM05D008101 ORTHO05D010163 4.9e-15 84.7 84 61.9
C02p55260 Brassica napus HOM05D008101 ORTHO05D010163 4.9e-15 84.7 84 61.9
THA.LOC109116617 Tarenaya hassleriana HOM05D008101 ORTHO05D010163 6.4e-15 84.3 85 64.7
Aa31LG2G4160 Aethionema arabicum HOM05D008101 ORTHO05D010163 5.0e-12 74.7 51 76.5
Migut.H00938 Erythranthe guttata HOM05D008101 ORTHO05D010163 2.9e-07 58.9 49 59.2
Gohir.D07G212050 Gossypium hirsutum HOM05D008101 ORTHO05D010163 2.9e-07 58.9 49 61.2
Gorai.001G239800 Gossypium raimondii HOM05D008101 ORTHO05D010163 2.9e-07 58.9 49 61.2
Gohir.A07G206000 Gossypium hirsutum HOM05D008101 ORTHO05D010163 3.7e-07 58.5 49 59.2
Thecc.04G085600 Theobroma cacao HOM05D008101 ORTHO05D010163 3.7e-07 58.5 49 59.2
Prupe.3G265300 Prunus persica HOM05D008101 ORTHO05D010163 8.3e-07 57.4 49 59.2
Cc07_g03530 Coffea canephora HOM05D008101 ORTHO05D010163 1.1e-06 57.0 48 58.3
Glyma.13G062100 Glycine max HOM05D008101 ORTHO05D010163 1.9e-06 56.2 50 58.0
MD09G1053300 Malus domestica HOM05D008101 ORTHO05D010163 2.4e-06 55.8 45 62.2
CSS0047461 Camellia sinensis var. sinensis HOM05D008101 ORTHO05D010163 3.2e-06 55.5 49 53.1
Lj2g0000476 Lotus japonicus HOM05D008101 ORTHO05D010163 3.2e-06 55.5 50 54.0
Potri.010G234200 Populus trichocarpa HOM05D008101 ORTHO05D010163 3.2e-06 55.5 49 59.2
Manes.02G047600 Manihot esculenta HOM05D008101 ORTHO05D010163 5.4e-06 54.7 49 55.1
PGR083G0374 Punica granatum HOM05D008101 ORTHO05D010163 5.4e-06 54.7 49 55.1
FAN09G1556 Fragaria x ananassa HOM05D008101 ORTHO05D010163 9.2e-06 53.9 50 54.0
Sopen02g032840 Solanum pennellii HOM05D008101 ORTHO05D010163 9.2e-06 53.9 49 55.1


User provided reference genes

Program Settings