Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g01760 Schrenkiella parvula HOM05D000007 ORTHO05D000017 1.4e-75 286.2 141 100.0
Thhalv10028334m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 1.2e-42 176.8 204 50.5
THA.LOC104818178 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 5.7e-13 78.2 163 33.7
THA.LOC104821432 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 4.1e-11 72.0 169 32.0
Thhalv10022356m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 3.8e-09 65.5 54 53.7
Medtr8g433030 Medicago truncatula HOM05D000007 ORTHO05D000017 3.8e-09 65.5 145 30.3
Carub.0008s0557 Capsella rubella HOM05D000007 ORTHO05D000017 1.5e-08 63.5 116 34.5
Thhalv10015820m.g Eutrema salsugineum HOM05D000007 ORTHO05D000017 5.5e-08 61.6 55 50.9
Glyma.08G350400 Glycine max HOM05D000007 ORTHO05D000017 1.6e-07 60.1 83 39.8
Lj3g0026954 Lotus japonicus HOM05D000007 ORTHO05D000017 2.7e-07 59.3 59 44.1
BcaC01g03833 Brassica carinata HOM05D000007 ORTHO05D000017 3.6e-07 58.9 51 51.0
BolC3t17020H Brassica oleracea HOM05D001353 ORTHO05D005187 3.6e-07 58.9 51 51.0
BolC3t17095H Brassica oleracea HOM05D001353 ORTHO05D000017 3.6e-07 58.9 51 51.0
CAN.G1437.16 Capsicum annuum HOM05D000007 ORTHO05D000017 1.0e-06 57.4 149 26.8
FAN19G0727 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.0e-06 57.4 101 32.7
FAN28G0255 Fragaria x ananassa HOM05D000007 ORTHO05D000017 1.0e-06 57.4 101 32.7
RcHm_v2.0_Chr1g0344741 Rosa chinensis HOM05D000007 ORTHO05D000039 1.8e-06 56.6 60 46.7
AUR62010298 Chenopodium quinoa HOM05D000007 ORTHO05D000017 2.3e-06 56.2 120 28.3
Nitab4.5_0000306g0270 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.3e-06 56.2 82 36.6
C03p48110 Brassica napus HOM05D000007 ORTHO05D000017 3.0e-06 55.8 51 47.1
RcHm_v2.0_Chr7g0203691 Rosa chinensis HOM05D000007 ORTHO05D000017 3.0e-06 55.8 128 29.7
AL4G39550 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 4.0e-06 55.5 50 52.0
Cfa007560 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.0e-06 55.5 46 47.8
BcaC04g21347 Brassica carinata HOM05D000007 ORTHO05D000017 5.2e-06 55.1 56 46.4
C09p32930 Brassica napus HOM05D000007 ORTHO05D000017 5.2e-06 55.1 56 46.4
BolC9t56128H Brassica oleracea HOM05D000007 ORTHO05D000017 5.2e-06 55.1 56 46.4
Cfa015552 Carpinus fangiana HOM05D000007 ORTHO05D000017 6.7e-06 54.7 44 50.0
Haze_02856 Corylus avellana HOM05D000007 ORTHO05D000039 6.7e-06 54.7 73 35.6
FAN26G1796 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.7e-06 54.7 101 32.7
Peaxi162Scf00469g00137 Petunia axillaris HOM05D000007 ORTHO05D000039 6.7e-06 54.7 44 52.3
Dinv05293 Davidia involucrata HOM05D000007 ORTHO05D000039 8.8e-06 54.3 118 28.8
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 8.8e-06 54.3 53 43.4
Lalb_Chr15g0087261 Lupinus albus HOM05D000007 ORTHO05D000017 8.8e-06 54.3 58 43.1
PSO541G3401 Papaver somniferum HOM05D000007 ORTHO05D000017 8.8e-06 54.3 81 35.8
SalBow2G0242 Salvia bowleyana HOM05D003262 ORTHO05D003608 8.8e-06 54.3 102 30.4


User provided reference genes

Program Settings