Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g01270 Schrenkiella parvula HOM05D006554 ORTHO05D008778 2.4e-142 508.8 263 100.0
BolC4t26342H Brassica oleracea HOM05D006554 ORTHO05D008778 4.1e-97 358.6 237 79.3
A04p13620 Brassica napus HOM05D004424 ORTHO05D005476 7.7e-96 354.4 238 79.0
BraA04t17023Z Brassica rapa HOM05D004424 ORTHO05D005476 7.7e-96 354.4 238 79.0
C04p47410 Brassica napus HOM05D004424 ORTHO05D005476 1.3e-95 353.6 237 78.5
Thhalv10027933m.g Eutrema salsugineum HOM05D006554 ORTHO05D008778 2.7e-85 319.3 237 70.0
AL7G49210 Arabidopsis lyrata HOM05D006554 ORTHO05D008778 1.0e-84 317.4 240 69.6
Carub.0007s3489 Capsella rubella HOM05D006554 ORTHO05D008778 2.6e-83 312.8 248 63.3
AT5G40600 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 4.4e-83 312.0 249 66.7
BolC4t27196H Brassica oleracea HOM05D006554 ORTHO05D008778 1.8e-81 306.6 225 72.0
CARHR261360 Cardamine hirsuta HOM05D006554 ORTHO05D008778 2.9e-71 272.7 248 60.9
AL5G16780 Arabidopsis lyrata HOM05D006554 ORTHO05D008778 5.4e-65 251.9 243 56.4
BcaB06g27536 Brassica carinata HOM05D006554 ORTHO05D008778 5.6e-62 241.9 152 80.9
Sp2g16620 Schrenkiella parvula HOM05D006554 ORTHO05D008778 7.5e-59 231.5 248 53.6
AT3G27420 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 9.8e-59 231.1 240 52.9
Carub.0005s0577 Capsella rubella HOM05D006554 ORTHO05D008778 1.7e-58 230.3 244 52.5
Thhalv10004828m.g Eutrema salsugineum HOM05D006554 ORTHO05D008778 8.3e-58 228.0 246 53.3
BcaC03g17463 Brassica carinata HOM05D006554 ORTHO05D017433 1.8e-52 210.3 241 49.4
C02p54190 Brassica napus HOM05D006554 ORTHO05D008778 7.5e-51 204.9 264 46.2
A02p35470 Brassica napus HOM05D006554 ORTHO05D017433 2.9e-50 203.0 251 48.6
BraA02t08548Z Brassica rapa HOM05D006554 ORTHO05D017433 3.7e-50 202.6 256 48.4
BolC2t11482H Brassica oleracea HOM05D006554 ORTHO05D008778 4.9e-50 202.2 268 46.6
Aa31LG9G1020 Aethionema arabicum HOM05D006554 ORTHO05D008778 2.7e-48 196.4 244 45.9
CARHR148770 Cardamine hirsuta HOM05D006554 ORTHO05D008778 4.6e-48 195.7 242 50.0
MELO3C014791.2 Cucumis melo HOM05D006554 ORTHO05D008778 5.1e-31 139.0 260 34.2
ClCG05G012880 Citrullus lanatus HOM05D006554 ORTHO05D008778 8.7e-31 138.3 276 32.6
Sed0003688 Sechium edule HOM05D006554 ORTHO05D008778 1.1e-30 137.9 272 34.2
BcaB07g30158 Brassica carinata HOM05D006554 ORTHO05D008778 1.5e-30 137.5 144 48.6
RcHm_v2.0_Chr2g0173581 Rosa chinensis HOM05D006554 ORTHO05D008778 1.9e-30 137.1 291 33.3
MD09G1020300 Malus domestica HOM05D006554 ORTHO05D008778 7.3e-30 135.2 305 32.1
CsaV3_3G027590 Cucumis sativus L. HOM05D006554 ORTHO05D008778 2.1e-29 133.7 260 33.1
Lalb_Chr22g0360641 Lupinus albus HOM05D006554 ORTHO05D008778 3.6e-29 132.9 256 34.4
Haze_14775 Corylus avellana HOM05D006554 ORTHO05D008778 1.1e-28 131.3 306 32.7
FvH4_6g52060 Fragaria vesca HOM05D006554 ORTHO05D008778 4.0e-28 129.4 261 34.9
SGA_v2.0_scaffold135G34926 Striga asiatica HOM05D006554 ORTHO05D008778 6.9e-28 128.6 279 31.9
Prupe.3G295900 Prunus persica HOM05D006554 ORTHO05D008778 1.2e-27 127.9 320 31.9
Duzib147G0564 Durio zibethinus HOM05D006554 ORTHO05D008778 1.5e-27 127.5 283 31.4
unitig_52.g17657 Utricularia gibba HOM05D006554 ORTHO05D008778 2.6e-27 126.7 240 34.2
Gohir.D04G059400 Gossypium hirsutum HOM05D006554 ORTHO05D008778 3.4e-27 126.3 282 31.9
Cfa007322 Carpinus fangiana HOM05D006554 ORTHO05D008778 4.4e-27 125.9 303 33.0
Gorai.012G066100 Gossypium raimondii HOM05D006554 ORTHO05D008778 4.4e-27 125.9 282 31.9
AUR62028440 Chenopodium quinoa HOM05D006554 ORTHO05D008778 7.6e-27 125.2 281 33.1
Manes.15G153200 Manihot esculenta HOM05D006554 ORTHO05D008778 7.6e-27 125.2 313 30.0
FAN14G0519 Fragaria x ananassa HOM05D006554 ORTHO05D008778 1.3e-26 124.4 282 33.3
Gohir.A05G353700 Gossypium hirsutum HOM05D006554 ORTHO05D008778 1.7e-26 124.0 282 31.2
QL02p073734 Quercus lobata HOM05D006554 ORTHO05D008778 3.8e-26 122.9 285 32.3
Medtr7g032890 Medicago truncatula HOM05D006554 ORTHO05D008778 4.9e-26 122.5 282 30.9
TPR.G1120 Trifolium pratense HOM05D006554 ORTHO05D008778 6.4e-26 122.1 300 30.3
Ah.03g136830 Amaranthus hybridus HOM05D003292 ORTHO05D004237 8.4e-26 121.7 274 31.8
Glyma.19G079100 Glycine max HOM05D006554 ORTHO05D008778 1.4e-25 120.9 292 30.1
Phvul.008G147100 Phaseolus vulgaris HOM05D006554 ORTHO05D008778 1.9e-25 120.6 288 29.2
Ciclev10015858m.g Citrus clementina HOM05D006554 ORTHO05D008778 3.2e-25 119.8 144 41.0
MSTRG.3126 Avicennia marina HOM05D006554 ORTHO05D008778 7.1e-25 118.6 307 29.0
FAN05G3817 Fragaria x ananassa HOM05D006554 ORTHO05D008778 1.6e-24 117.5 265 34.0
Lj1g0005465 Lotus japonicus HOM05D006554 ORTHO05D008778 2.1e-24 117.1 279 32.3
FAN09G2431 Fragaria x ananassa HOM05D006554 ORTHO05D008778 3.5e-24 116.3 254 34.3
GSVIVG01032362001 Vitis vinifera HOM05D006554 ORTHO05D008778 4.6e-24 115.9 358 28.8
PGR083G2647 Punica granatum HOM05D006554 ORTHO05D008778 7.8e-24 115.2 259 30.9
TAR629G0722 Trochodendron aralioides HOM05D006554 ORTHO05D008778 1.3e-23 114.4 129 45.0
arahy.Tifrunner.gnm1.ann1.1L0SFZ Arachis hypogaea HOM05D006554 ORTHO05D008778 2.3e-23 113.6 331 28.4
EL10Ac5g11640 Beta vulgaris HOM05D006554 ORTHO05D008778 2.3e-23 113.6 297 31.3
Glyma.16G067800 Glycine max HOM05D006554 ORTHO05D008778 2.3e-23 113.6 280 27.9
Hma1.2p1_0279F.1_g111960 Hydrangea macrophylla HOM05D006554 ORTHO05D008778 2.3e-23 113.6 229 33.6
Migut.H00036 Erythranthe guttata HOM05D006554 ORTHO05D008778 3.9e-23 112.8 350 27.7
FAN02G3632 Fragaria x ananassa HOM05D006554 ORTHO05D008778 6.6e-23 112.1 261 34.1
SalBow1G4569 Salvia bowleyana HOM05D006554 ORTHO05D008778 8.7e-23 111.7 264 27.7
RhsimUnG0087800 Rhododendron simsii HOM05D006554 ORTHO05D008778 1.5e-22 110.9 266 33.1
vmacro05891 Vaccinium macrocarpon HOM05D006554 ORTHO05D008778 1.5e-22 110.9 287 32.4
Potri.003G101100 Populus trichocarpa HOM05D006554 ORTHO05D008778 1.9e-22 110.5 271 29.2
CiPaw.04G030700 Carya illinoinensis HOM05D006554 ORTHO05D008778 2.5e-22 110.2 280 31.1
RhsimUnG0005800 Rhododendron simsii HOM05D006554 ORTHO05D008778 1.3e-21 107.8 266 32.7
CANSAT64G1839 Cannabis sativa HOM05D006554 ORTHO05D008778 1.6e-21 107.5 327 27.8
Dinv33413 Davidia involucrata HOM05D006554 ORTHO05D008778 2.1e-21 107.1 134 41.0
Cc07_g00120 Coffea canephora HOM05D006554 ORTHO05D008778 1.1e-20 104.8 277 27.4
Prupe.3G207500 Prunus persica HOM05D006554 ORTHO05D008778 4.0e-20 102.8 296 28.7
Nn4g22538 Nelumbo nucifera HOM05D006554 ORTHO05D008778 1.5e-19 100.9 293 27.6
HPP92_003738 Vanilla planifolia HOM05D006554 ORTHO05D008778 1.5e-19 100.9 245 31.8
ECA246G2886 Erigeron canadensis HOM05D006554 ORTHO05D008778 2.0e-19 100.5 125 40.8
ATR0199G021 Amborella trichopoda HOM05D006554 ORTHO05D008778 2.6e-19 100.1 285 29.1
FAN14G5462 Fragaria x ananassa HOM05D006554 ORTHO05D008778 2.6e-19 100.1 329 28.0
Lsat_1_v5_gn_0_6020 Lactuca sativa HOM05D006554 ORTHO05D008778 3.4e-19 99.8 328 27.1
Peaxi162Scf00080g01410 Petunia axillaris HOM05D006554 ORTHO05D008778 7.6e-19 98.6 155 32.9
Eucgr.J02264 Eucalyptus grandis HOM05D006554 ORTHO05D008778 2.2e-18 97.1 148 37.8
Sabra03G0068900 Salix brachista HOM05D006554 ORTHO05D008778 2.2e-18 97.1 126 35.7
Hund23035 Selenicereus undatus HOM05D006554 ORTHO05D008778 2.2e-18 97.1 259 27.8
Aqoxy5G03668 Aquilegia oxysepala HOM05D006554 ORTHO05D008778 2.9e-18 96.7 139 37.4
Atru.chr6.2449 Acer truncatum HOM05D006554 ORTHO05D008778 3.8e-18 96.3 103 42.7
Thecc.04G022100 Theobroma cacao HOM05D006554 ORTHO05D008778 8.4e-18 95.1 174 31.6
Solyc02g067900.3 Solanum lycopersicum HOM05D006554 ORTHO05D008778 1.2e-16 91.3 322 23.3
Nitab4.5_0000040g0640 Nicotiana tabacum HOM05D006554 ORTHO05D008778 3.5e-16 89.7 329 23.1
Sopen02g017020 Solanum pennellii HOM05D006554 ORTHO05D008778 3.5e-16 89.7 126 34.1
PGSC0003DMG400006964 Solanum tuberosum HOM05D006554 ORTHO05D008778 3.5e-16 89.7 126 34.1
Nitab4.5_0004496g0080 Nicotiana tabacum HOM05D006554 ORTHO05D008778 7.9e-16 88.6 124 35.5
VMungo1383G1633 Vigna mungo HOM05D006554 ORTHO05D008778 1.3e-15 87.8 105 40.0
CSS0050446 Camellia sinensis var. sinensis HOM05D006554 ORTHO05D008778 2.3e-15 87.0 118 37.3
Oeu050455.2 Olea europaea HOM05D006554 ORTHO05D008778 3.7e-13 79.7 353 22.7
Actinidia05967 Actinidia chinensis HOM05D006554 ORTHO05D008778 2.4e-12 77.0 340 24.1
PSO675G3751 Papaver somniferum HOM05D006554 ORTHO05D008778 2.4e-12 77.0 125 33.6
SHI53794 Sapria himalayana HOM05D006554 ORTHO05D008778 9.0e-12 75.1 155 29.0
PSO541G1758 Papaver somniferum HOM05D006554 ORTHO05D008778 3.4e-11 73.2 196 26.5
CDE02G2727 Ceratophyllum demersum HOM05D003393 ORTHO05D003916 1.7e-10 70.9 128 31.2
CSS0049853 Camellia sinensis var. sinensis HOM05D006554 ORTHO05D008778 3.8e-10 69.7 71 46.5
CDE09G0234 Ceratophyllum demersum HOM05D006554 ORTHO05D008778 3.8e-10 69.7 127 33.1
BcaC06g30992 Brassica carinata HOM05D000131 ORTHO05D008778 2.1e-08 63.9 78 47.4
Psat7g108920 Pisum sativum HOM05D006554 ORTHO05D008778 2.1e-08 63.9 209 26.3
Cpa.g.sc130.63 Carica papaya HOM05D006554 ORTHO05D008778 3.5e-08 63.2 125 30.4
unitig_748.g8305 Utricularia gibba HOM05D000336 ORTHO05D002705 1.9e-06 57.4 160 26.2
Eucgr.L02321 Eucalyptus grandis HOM05D006554 ORTHO05D008778 3.3e-06 56.6 64 46.9
Eucgr.C03321 Eucalyptus grandis HOM05D006554 ORTHO05D008778 4.3e-06 56.2 64 46.9
Mapoly0010s0030 Marchantia polymorpha HOM05D000336 ORTHO05D002705 9.6e-06 55.1 98 32.7


User provided reference genes

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