Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp7g00300 Schrenkiella parvula HOM05D002129 ORTHO05D002188 7.0e-226 788.5 1155 100.0
BcaB06g27672 Brassica carinata HOM05D002129 ORTHO05D002188 7.7e-108 396.4 309 90.3
BcaC02g08917 Brassica carinata HOM05D002129 ORTHO05D002188 1.9e-106 391.7 326 83.1
A04p14960 Brassica napus HOM05D002129 ORTHO05D002188 1.4e-104 385.6 310 88.1
C04p49150 Brassica napus HOM05D002129 ORTHO05D002188 5.7e-103 380.2 309 84.1
AT5G41790 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 4.1e-101 374.0 328 73.8
Carub.0007s3359 Capsella rubella HOM05D002129 ORTHO05D002188 2.3e-96 358.2 310 75.5
AL7G47470 Arabidopsis lyrata HOM05D002129 ORTHO05D002188 3.5e-92 344.4 311 73.6
BraA04t17139Z Brassica rapa HOM05D002129 ORTHO05D002188 7.8e-92 343.2 246 85.8
BolC4t26499H Brassica oleracea HOM05D002129 ORTHO05D002188 5.6e-90 337.0 243 82.7
Carub.0007s3367 Capsella rubella HOM05D002129 ORTHO05D021914 2.2e-78 298.5 340 62.1
C06p20190 Brassica napus HOM05D001971 ORTHO05D002188 8.9e-72 276.6 301 67.1
BolC6t37203H Brassica oleracea HOM05D002129 ORTHO05D002188 1.9e-66 258.8 245 72.7
CARHR212780 Cardamine hirsuta HOM05D002129 ORTHO05D002188 5.3e-64 250.8 188 85.1
Aa31LG9G340 Aethionema arabicum HOM05D002129 ORTHO05D002188 2.0e-63 248.8 255 66.3
THA.LOC104809341 Tarenaya hassleriana HOM05D002129 ORTHO05D002188 7.6e-63 246.9 452 45.6
Thhalv10027620m.g Eutrema salsugineum HOM05D002129 ORTHO05D002188 1.5e-58 232.6 212 76.4
AL2G10610 Arabidopsis lyrata HOM05D002129 ORTHO05D002188 8.1e-57 226.9 236 64.4
Thhalv10023387m.g Eutrema salsugineum HOM05D002129 ORTHO05D002188 5.3e-56 224.2 227 66.1
BcaB07g31455 Brassica carinata HOM05D002129 ORTHO05D002188 1.9e-53 215.7 242 57.0
C09p17910 Brassica napus HOM05D002129 ORTHO05D002188 3.3e-50 204.9 233 60.1
BolC9t54688H Brassica oleracea HOM05D002129 ORTHO05D002188 3.3e-50 204.9 233 60.1
Sp2g00430 Schrenkiella parvula HOM05D002129 ORTHO05D002188 7.4e-50 203.8 211 64.5
A09p14790 Brassica napus HOM05D002129 ORTHO05D002188 2.1e-49 202.2 233 60.5
BcaC04g22559 Brassica carinata HOM05D002129 ORTHO05D002188 5.3e-48 197.6 233 58.8
Carub.0002s0048 Capsella rubella HOM05D002129 ORTHO05D002188 5.3e-48 197.6 188 68.6
arahy.Tifrunner.gnm1.ann1.DN0YA4 Arachis hypogaea HOM05D002129 ORTHO05D002188 1.7e-46 192.6 343 38.8
Gohir.A02G102200 Gossypium hirsutum HOM05D002129 ORTHO05D002188 1.9e-45 189.1 341 38.1
Duzib205G0555 Durio zibethinus HOM05D002129 ORTHO05D002188 3.2e-45 188.3 251 47.0
AT1G64330 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 6.7e-43 180.6 185 68.1
Gorai.003G081700 Gossypium raimondii HOM05D002129 ORTHO05D002188 1.1e-42 179.9 341 37.5
Gohir.D03G081900 Gossypium hirsutum HOM05D002129 ORTHO05D002188 5.7e-42 177.6 217 48.8
arahy.Tifrunner.gnm1.ann1.Q3GPI2 Arachis hypogaea HOM05D002129 ORTHO05D002188 7.4e-42 177.2 251 44.2
COL.COLO4_21718 Corchorus olitorius HOM05D002129 ORTHO05D002188 7.4e-42 177.2 232 47.0
CARHR046630 Cardamine hirsuta HOM05D002129 ORTHO05D002188 1.3e-41 176.4 226 57.1
Ciclev10018618m.g Citrus clementina HOM05D002129 ORTHO05D002188 2.1e-41 175.6 255 47.5
Thecc.03G293200 Theobroma cacao HOM05D002129 ORTHO05D002188 2.8e-41 175.3 228 48.7
Eucgr.E00844 Eucalyptus grandis HOM05D002129 ORTHO05D002188 1.1e-40 173.3 253 43.1
Potri.001G094200 Populus trichocarpa HOM05D002129 ORTHO05D002188 2.4e-40 172.2 237 47.7
Duzib068G1418 Durio zibethinus HOM05D002129 ORTHO05D002188 3.1e-40 171.8 251 43.4
TWI60G1278 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 3.1e-40 171.8 359 37.3
Manes.01G045900 Manihot esculenta HOM05D002129 ORTHO05D002188 4.1e-40 171.4 238 48.3
Gohir.D09G185400 Gossypium hirsutum HOM05D002129 ORTHO05D002188 3.4e-39 168.3 222 46.4
Gorai.006G207900 Gossypium raimondii HOM05D002129 ORTHO05D002188 2.2e-38 165.6 217 46.5
Gohir.A09G190800 Gossypium hirsutum HOM05D002129 ORTHO05D002188 8.4e-38 163.7 219 46.6
Actinidia27335 Actinidia chinensis HOM05D002129 ORTHO05D002188 4.6e-36 157.9 252 44.8
Ca_17495_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 4.6e-36 157.9 250 42.4
Manes.10G064266 Manihot esculenta HOM05D002129 ORTHO05D002188 1.8e-35 156.0 253 45.5
MD14G1121500 Malus domestica HOM05D002129 ORTHO05D002188 1.5e-34 152.9 363 40.2
Nitab4.5_0000223g0210 Nicotiana tabacum HOM05D002129 ORTHO05D002188 4.3e-34 151.4 351 41.0
Potri.003G137400 Populus trichocarpa HOM05D002129 ORTHO05D002188 7.4e-34 150.6 223 44.4
Sabra03G0098900 Salix brachista HOM05D002129 ORTHO05D002188 4.8e-33 147.9 245 38.0
Medtr8g099275 Medicago truncatula HOM05D002129 ORTHO05D002188 2.4e-32 145.6 253 39.1
RcHm_v2.0_Chr7g0195431 Rosa chinensis HOM05D002129 ORTHO05D002188 6.9e-32 144.1 204 46.6
Phvul.002G296300 Phaseolus vulgaris HOM05D002129 ORTHO05D002188 9.0e-32 143.7 227 44.1
Solyc08g082010.3 Solanum lycopersicum HOM05D002129 ORTHO05D002188 9.0e-32 143.7 233 44.2
FAN08G2643 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.0e-31 142.5 208 45.7
Glyma.05G215100 Glycine max HOM05D002129 ORTHO05D002188 2.0e-31 142.5 335 34.9
A07p20920 Brassica napus HOM05D002129 ORTHO05D002188 2.6e-31 142.1 169 65.7
TAR374G0929 Trochodendron aralioides HOM05D002129 ORTHO05D002188 7.7e-31 140.6 253 37.9
Cpa.g.sc79.65 Carica papaya HOM05D002129 ORTHO05D002188 1.0e-30 140.2 217 46.5
Manes.02G012600 Manihot esculenta HOM05D002129 ORTHO05D002188 1.3e-30 139.8 194 47.4
Cfa012842 Carpinus fangiana HOM05D002129 ORTHO05D002188 2.2e-30 139.0 188 43.1
Oeu009945.1 Olea europaea HOM05D002129 ORTHO05D002188 3.8e-30 138.3 341 35.2
Haze_08667 Corylus avellana HOM05D002129 ORTHO05D002188 6.5e-30 137.5 183 43.2
Sopen08g030310 Solanum pennellii HOM05D002129 ORTHO05D002188 8.5e-30 137.1 222 44.6
Cc08_g15780 Coffea canephora HOM05D002129 ORTHO05D002188 1.9e-29 136.0 213 41.8
Sabra01G0070100 Salix brachista HOM05D002129 ORTHO05D002188 1.9e-29 136.0 204 45.6
Dinv37550 Davidia involucrata HOM05D002129 ORTHO05D002188 2.5e-29 135.6 368 33.7
Lj4g0008940 Lotus japonicus HOM05D002129 ORTHO05D002188 2.5e-29 135.6 207 44.9
FAN13G0971 Fragaria x ananassa HOM05D002129 ORTHO05D002188 4.2e-29 134.8 347 36.6
vmacro13912 Vaccinium macrocarpon HOM05D002129 ORTHO05D002188 4.2e-29 134.8 182 41.8
Duzib084G0477 Durio zibethinus HOM05D002129 ORTHO05D002188 7.2e-29 134.0 200 41.5
Glyma.08G021400 Glycine max HOM05D002129 ORTHO05D002188 9.4e-29 133.7 370 33.5
CSS0045654 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 1.2e-28 133.3 360 29.4
Rhsim07G0084000 Rhododendron simsii HOM05D002129 ORTHO05D002188 2.7e-28 132.1 182 41.8
FAN18G3989 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.0e-27 130.2 347 36.9
TPR.G3412 Trifolium pratense HOM05D002129 ORTHO05D002188 1.4e-27 129.8 215 40.9
Lalb_Chr16g0390551 Lupinus albus HOM05D002129 ORTHO05D002188 2.3e-27 129.0 237 35.9
FvH4_5g04072 Fragaria vesca HOM05D002129 ORTHO05D002188 5.1e-27 127.9 347 36.6
CiPaw.12G085000 Carya illinoinensis HOM05D002129 ORTHO05D002188 2.5e-26 125.6 179 43.6
Lalb_Chr05g0224241 Lupinus albus HOM05D002129 ORTHO05D002188 2.5e-26 125.6 184 39.7
Atru.chr9.2042 Acer truncatum HOM05D002129 ORTHO05D002188 3.3e-26 125.2 188 44.7
SGA_v2.0_scaffold111G31429 Striga asiatica HOM05D002129 ORTHO05D002188 3.3e-26 125.2 227 41.4
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 4.3e-26 124.8 187 52.4
Nitab4.5_0004161g0030 Nicotiana tabacum HOM05D002129 ORTHO05D002188 4.3e-26 124.8 208 42.3
VMungo0251G1428 Vigna mungo HOM05D002129 ORTHO05D002188 4.3e-26 124.8 252 34.5
QL02p031434 Quercus lobata HOM05D002129 ORTHO05D002188 5.7e-26 124.4 181 42.0
MD06G1102300 Malus domestica HOM05D002129 ORTHO05D002188 4.8e-25 121.3 206 43.7
BcaC02g11041 Brassica carinata HOM05D002129 ORTHO05D016708 6.3e-25 120.9 193 65.3
CAN.G532.94 Capsicum annuum HOM05D002129 ORTHO05D002188 6.3e-25 120.9 186 47.3
CANSAT21G2383 Cannabis sativa HOM05D002129 ORTHO05D002188 1.1e-24 120.2 184 44.0
PGSC0003DMG400012303 Solanum tuberosum HOM05D002129 ORTHO05D002188 1.4e-24 119.8 172 46.5
CiPaw.11G123900 Carya illinoinensis HOM05D002129 ORTHO05D002188 2.4e-24 119.0 180 38.3
Oeu042387.1 Olea europaea HOM05D002129 ORTHO05D002188 5.3e-24 117.9 191 45.0
Sc07g0009960 Simmondsia chinensis HOM05D002129 ORTHO05D002188 5.3e-24 117.9 348 40.5
FAN04G1700 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.6e-23 115.5 272 34.9
FAN04G3154 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.6e-23 115.5 272 34.9
AUR62019808 Chenopodium quinoa HOM05D002129 ORTHO05D002188 3.4e-23 115.2 184 38.0
SGA_v2.0_scaffold144G35850 Striga asiatica HOM05D002129 ORTHO05D002188 3.4e-23 115.2 227 42.3
Peaxi162Scf00074g01134 Petunia axillaris HOM05D002129 ORTHO05D002188 7.7e-23 114.0 231 39.0
ClCG07G014890 Citrullus lanatus HOM05D002129 ORTHO05D002188 1.3e-22 113.2 235 43.0
GSVIVG01019499001 Vitis vinifera HOM05D002129 ORTHO05D002188 2.2e-22 112.5 251 34.7
AUR62010809 Chenopodium quinoa HOM05D002129 ORTHO05D002188 2.9e-22 112.1 183 36.6
Psat7g027680 Pisum sativum HOM05D002129 ORTHO05D002188 6.5e-22 110.9 214 42.5
ECA240G2507 Erigeron canadensis HOM05D002129 ORTHO05D002188 1.1e-21 110.2 221 43.0
Aqoxy5G04152 Aquilegia oxysepala HOM05D002129 ORTHO05D002188 4.2e-21 108.2 345 35.1
MSTRG.25657 Avicennia marina HOM05D002129 ORTHO05D002188 5.5e-21 107.8 268 38.1
Lsat_1_v5_gn_6_12040 Lactuca sativa HOM05D002129 ORTHO05D002188 7.2e-21 107.5 226 39.8
SalBow8G2059 Salvia bowleyana HOM05D002129 ORTHO05D002188 1.4e-19 103.2 353 40.2
CsaV3_4G006420 Cucumis sativus L. HOM05D002129 ORTHO05D002188 1.8e-19 102.8 229 38.9
arahy.Tifrunner.gnm1.ann1.F3VNHJ Arachis hypogaea HOM05D002129 ORTHO05D002188 3.0e-19 102.1 149 37.6
DCAR_005027 Daucus carota HOM05D002129 ORTHO05D002188 3.0e-19 102.1 245 32.7
Lalb_Chr09g0332631 Lupinus albus HOM05D002129 ORTHO05D002188 3.0e-19 102.1 357 33.3
PGR042G1587 Punica granatum HOM05D002129 ORTHO05D002188 6.7e-19 100.9 253 35.6
MELO3C016308.2 Cucumis melo HOM05D002129 ORTHO05D002188 8.8e-19 100.5 229 38.4
BcaB02g10228 Brassica carinata HOM05D002129 ORTHO05D016708 1.1e-18 100.1 179 43.0
Dinv38857 Davidia involucrata HOM05D002129 ORTHO05D002188 1.1e-18 100.1 242 31.0
Sed0022097 Sechium edule HOM05D002129 ORTHO05D002188 2.0e-18 99.4 253 36.4
Migut.E01236 Erythranthe guttata HOM05D002129 ORTHO05D002188 2.6e-18 99.0 187 40.1
Lsat_1_v5_gn_6_85821 Lactuca sativa HOM05D002129 ORTHO05D002188 2.6e-18 99.0 204 43.6
ECA233G6022 Erigeron canadensis HOM05D002129 ORTHO05D002188 4.4e-18 98.2 341 34.0
arahy.Tifrunner.gnm1.ann1.P7UIV5 Arachis hypogaea HOM05D002129 ORTHO05D002188 7.4e-18 97.4 149 35.6
HanXRQChr02g0048241 Helianthus annuus HOM05D002129 ORTHO05D002188 8.2e-17 94.0 184 41.8
FAN18G4528 Fragaria x ananassa HOM05D002129 ORTHO05D002188 4.1e-16 91.7 315 34.6
Actinidia01396 Actinidia chinensis HOM05D002129 ORTHO05D002188 2.0e-15 89.4 243 31.3
HanXRQChr03g0085141 Helianthus annuus HOM05D002129 ORTHO05D002188 2.0e-15 89.4 212 38.7
Prupe.5G115200 Prunus persica HOM05D002129 ORTHO05D002188 2.6e-15 89.0 209 34.0
CSS0027740 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 1.0e-14 87.0 245 29.8
EL10Ac5g12884 Beta vulgaris HOM05D002129 ORTHO05D002188 8.5e-14 84.0 184 43.5
CSS0018198 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 1.5e-13 83.2 245 29.0
Rhsim02G0241100 Rhododendron simsii HOM05D002129 ORTHO05D002188 4.2e-13 81.6 176 31.8
Dinv37551 Davidia involucrata HOM05D002129 ORTHO05D002188 4.7e-12 78.2 192 29.2
Migut.A00678 Erythranthe guttata HOM05D002129 ORTHO05D002188 6.1e-12 77.8 277 32.9
Thecc.03G293100 Theobroma cacao HOM05D002129 ORTHO05D002188 3.0e-11 75.5 228 29.8
Migut.N02095 Erythranthe guttata HOM05D002129 ORTHO05D002188 5.2e-11 74.7 245 31.0
MD14G1121400 Malus domestica HOM05D002129 ORTHO05D002188 6.7e-11 74.3 250 33.2
Oeu061086.1 Olea europaea HOM05D002129 ORTHO05D002188 1.1e-10 73.6 254 29.5
SalBow1G3214 Salvia bowleyana HOM05D002129 ORTHO05D002188 1.1e-10 73.6 251 31.1
A07p20930 Brassica napus HOM05D002129 ORTHO05D002188 2.0e-10 72.8 42 90.5
PSO135G0315 Papaver somniferum HOM05D031015 ORTHO05D002188 2.0e-10 72.8 246 32.9
BcaC08g44556 Brassica carinata HOM05D002129 ORTHO05D002188 2.6e-10 72.4 42 90.5
CSS0015477 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 7.4e-10 70.9 248 27.0
MD06G1102200 Malus domestica HOM05D002129 ORTHO05D002188 7.4e-10 70.9 337 29.1
CSS0047098 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 2.2e-09 69.3 248 26.6
Potri.003G137300 Populus trichocarpa HOM05D002129 ORTHO05D002188 2.2e-09 69.3 250 27.6
vmacro11445 Vaccinium macrocarpon HOM05D001971 ORTHO05D003057 2.2e-09 69.3 214 28.0
unitig_52.g17439 Utricularia gibba HOM05D002129 ORTHO05D002188 3.7e-09 68.6 162 38.3
CAN.G26.3 Capsicum annuum HOM05D002129 ORTHO05D002188 6.3e-09 67.8 94 40.4
PSO170G1432 Papaver somniferum HOM05D031015 ORTHO05D002188 1.1e-08 67.0 183 37.7
Actinidia04212 Actinidia chinensis HOM05D002129 ORTHO05D002188 3.1e-08 65.5 91 42.9
MSTRG.11936 Avicennia marina HOM05D002129 ORTHO05D002188 3.1e-08 65.5 235 34.9
unitig_62.g23616 Utricularia gibba HOM05D002129 ORTHO05D002188 5.3e-08 64.7 226 32.3
Prupe.5G115300 Prunus persica HOM05D002129 ORTHO05D002188 7.0e-08 64.3 175 31.4
CANSAT21G0822 Cannabis sativa HOM05D002129 ORTHO05D002188 2.6e-07 62.4 252 27.8
Migut.E01235 Erythranthe guttata HOM05D002129 ORTHO05D002188 2.6e-07 62.4 238 34.9
PSO384G3006 Papaver somniferum HOM05D031015 ORTHO05D002188 3.5e-07 62.0 183 36.6
QL12p009828 Quercus lobata HOM05D002129 ORTHO05D002188 3.5e-07 62.0 236 25.8
QL12p010595 Quercus lobata HOM05D002129 ORTHO05D002188 3.5e-07 62.0 236 25.8
Sabra03G0098800 Salix brachista HOM05D002129 ORTHO05D002188 5.9e-07 61.2 228 28.1
Ah.12g052310 Amaranthus hybridus HOM05D002129 ORTHO05D002188 7.7e-07 60.8 154 37.7
Sc07g0009950 Simmondsia chinensis HOM05D002129 ORTHO05D002188 7.7e-07 60.8 229 27.1
QL02p031447 Quercus lobata HOM05D002129 ORTHO05D002188 3.8e-06 58.5 220 25.0
Nitab4.5_0005112g0010 Nicotiana tabacum HOM05D002129 ORTHO05D002188 5.0e-06 58.2 82 39.0
Phvul.002G163000 Phaseolus vulgaris HOM05D002129 ORTHO05D002188 8.5e-06 57.4 89 39.3
TWI15G0725 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 8.5e-06 57.4 212 25.9


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