Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 1.7e-145 519.2 248 100.0
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 1.8e-131 472.6 248 89.5
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 6.5e-129 464.2 249 90.4
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 8.5e-129 463.8 248 89.9
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 2.7e-127 458.8 248 87.9
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 2.8e-124 448.7 248 88.3
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 2.8e-124 448.7 249 86.3
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 2.5e-120 435.6 245 85.7
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 9.4e-120 433.7 245 83.7
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 6.1e-119 431.0 245 84.5
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 1.4e-118 429.9 245 84.1
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 5.7e-117 424.5 245 84.5
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 4.2e-112 408.3 244 80.7
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 1.2e-106 390.2 246 74.4
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 8.5e-105 384.0 246 74.8
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 3.2e-104 382.1 246 74.4
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 3.2e-104 382.1 249 73.5
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 5.2e-102 374.8 255 71.4
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 5.2e-102 374.8 248 73.4
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 6.8e-102 374.4 247 72.1
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 1.5e-101 373.2 245 73.9
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 1.5e-101 373.2 246 74.0
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 7.5e-101 370.9 246 71.5
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 3.7e-100 368.6 246 72.4
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 1.1e-99 367.1 244 73.0
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 3.1e-99 365.5 247 69.2
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 3.1e-99 365.5 244 72.5
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 7.0e-99 364.4 227 74.0
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 7.0e-99 364.4 246 72.4
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 9.1e-99 364.0 247 69.2
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 1.2e-98 363.6 244 70.9
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 1.2e-98 363.6 242 71.1
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 2.7e-98 362.5 241 71.0
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 1.0e-97 360.5 249 70.3
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.0e-97 360.5 237 73.8
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 2.3e-97 359.4 281 65.1
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 1.5e-96 356.7 247 69.6
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 1.5e-96 356.7 245 69.8
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 5.5e-96 354.8 245 69.4
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 9.5e-96 354.0 241 70.5
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 1.2e-95 353.6 247 66.8
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 1.2e-95 353.6 247 68.8
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 2.1e-95 352.8 247 70.4
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 4.7e-95 351.7 249 69.9
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 4.7e-95 351.7 248 67.7
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 1.4e-94 350.1 242 69.4
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.3e-94 349.4 306 59.5
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 4.0e-94 348.6 247 68.8
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 4.0e-94 348.6 245 69.0
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 1.2e-93 347.1 256 65.2
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 3.4e-93 345.5 244 67.6
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 3.4e-93 345.5 256 65.2
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 3.4e-93 345.5 247 66.8
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 4.4e-93 345.1 254 68.1
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 4.4e-93 345.1 245 71.0
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.3e-92 343.6 244 68.4
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 1.3e-92 343.6 250 67.2
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 1.3e-92 343.6 251 66.1
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 2.2e-92 342.8 242 66.9
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 2.2e-92 342.8 243 68.7
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 3.7e-92 342.0 250 66.8
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 4.9e-92 341.7 245 69.4
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 1.4e-91 340.1 247 67.2
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 1.8e-91 339.7 241 68.9
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 7.0e-91 337.8 246 67.9
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 2.7e-90 335.9 250 63.2
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 2.7e-90 335.9 267 63.3
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.3e-89 333.6 258 64.0
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 7.3e-88 327.8 242 61.6
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 2.1e-87 326.2 206 74.8
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 1.4e-86 323.6 244 64.3
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 8.9e-86 320.9 242 62.0
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 2.6e-85 319.3 250 63.6
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 2.6e-85 319.3 240 65.0
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 4.6e-82 308.5 241 60.2
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 3.0e-81 305.8 269 58.4
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 6.2e-79 298.1 247 62.8
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 2.3e-78 296.2 185 76.8
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 6.8e-78 294.7 241 60.6
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 1.5e-77 293.5 193 73.6
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 7.5e-77 291.2 281 54.1
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 9.8e-77 290.8 254 56.3
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 1.7e-76 290.0 298 51.0
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 7.0e-75 284.6 252 57.5
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 1.2e-74 283.9 257 58.0
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 1.3e-73 280.4 272 54.0
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 3.0e-73 279.3 245 56.7
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 8.6e-73 277.7 254 58.3
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 1.1e-70 270.8 175 73.1
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 1.1e-70 270.8 187 70.1
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 3.1e-70 269.2 266 52.6
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 6.4e-68 261.5 183 68.9
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 1.3e-65 253.8 211 57.8
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 1.5e-64 250.4 288 50.3
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 4.3e-64 248.8 218 56.9
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 1.6e-63 246.9 283 48.8
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 3.2e-59 232.6 251 49.0
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 1.3e-49 200.7 136 72.8
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 1.1e-46 191.0 133 67.7
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 3.1e-46 189.5 117 74.4
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 3.8e-44 182.6 181 54.1
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 7.9e-26 121.7 85 69.4
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 5.7e-24 115.5 92 62.0
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 9.7e-24 114.8 90 63.3
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 3.8e-12 76.3 40 77.5
SMO307G0066 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 1.4e-06 57.8 124 28.2
AUR62004051 Chenopodium quinoa HOM05D005677 ORTHO05D006966 4.1e-06 56.2 158 27.2
Ciclev10026134m.g Citrus clementina HOM05D006469 ORTHO05D008034 7.0e-06 55.5 128 28.1


User provided reference genes

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