Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 1.0e-54 216.5 105 100.0
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 1.5e-50 202.6 105 93.3
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 4.8e-49 197.6 105 90.5
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 1.4e-48 196.1 105 91.4
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 1.8e-48 195.7 105 89.5
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 4.1e-48 194.5 105 88.6
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 4.1e-48 194.5 105 90.5
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 9.0e-48 193.4 105 89.5
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 2.5e-45 185.3 103 85.4
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 4.3e-42 174.5 103 81.6
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 4.8e-41 171.0 103 76.7
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 2.4e-40 168.7 102 77.5
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 3.1e-40 168.3 103 75.7
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 6.9e-40 167.2 104 75.0
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 6.9e-40 167.2 103 75.7
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 9.1e-40 166.8 103 75.7
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 1.2e-39 166.4 103 77.7
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 1.2e-39 166.4 103 77.7
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 1.5e-39 166.0 103 76.7
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 2.6e-39 165.2 103 75.7
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 2.6e-39 165.2 102 75.5
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 3.4e-39 164.9 103 74.8
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 4.5e-39 164.5 103 76.7
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 7.7e-39 163.7 103 75.7
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.3e-38 162.9 103 75.7
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 1.3e-38 162.9 103 74.8
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 1.3e-38 162.9 104 73.1
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 2.2e-38 162.2 103 76.7
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 3.8e-38 161.4 103 73.8
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 5.0e-38 161.0 103 72.8
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 5.0e-38 161.0 103 72.8
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 8.5e-38 160.2 103 70.9
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 8.5e-38 160.2 103 74.8
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 8.5e-38 160.2 103 72.8
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.1e-37 159.8 103 73.8
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 1.1e-37 159.8 102 72.5
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 1.1e-37 159.8 103 71.8
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.4e-37 159.5 103 72.8
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 1.4e-37 159.5 103 73.8
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 1.4e-37 159.5 103 73.8
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 1.9e-37 159.1 103 75.7
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 3.2e-37 158.3 103 72.8
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 4.2e-37 157.9 103 73.8
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 4.2e-37 157.9 103 72.8
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 5.5e-37 157.5 103 73.8
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 5.5e-37 157.5 103 74.8
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 5.5e-37 157.5 103 72.8
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 7.2e-37 157.1 103 71.8
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 7.2e-37 157.1 103 70.9
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 1.2e-36 156.4 103 71.8
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 1.2e-36 156.4 103 71.8
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 1.2e-36 156.4 103 71.8
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 1.6e-36 156.0 103 70.9
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 2.1e-36 155.6 103 69.9
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 2.7e-36 155.2 103 69.9
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 3.6e-36 154.8 103 69.9
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 7.9e-36 153.7 103 68.0
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 7.9e-36 153.7 103 70.9
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 1.0e-35 153.3 103 68.9
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 1.4e-35 152.9 103 68.9
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 1.8e-35 152.5 102 67.6
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 1.8e-35 152.5 103 69.9
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 1.8e-35 152.5 103 68.0
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 1.8e-35 152.5 103 67.0
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 1.8e-35 152.5 103 67.0
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 2.3e-35 152.1 103 68.9
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 2.3e-35 152.1 94 75.5
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 3.0e-35 151.8 102 66.7
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 3.9e-35 151.4 103 68.0
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 3.9e-35 151.4 103 71.8
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 3.9e-35 151.4 102 67.6
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 5.1e-35 151.0 103 66.0
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 5.1e-35 151.0 102 66.7
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 5.1e-35 151.0 102 66.7
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 5.1e-35 151.0 103 67.0
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 5.1e-35 151.0 103 67.0
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 5.1e-35 151.0 96 76.0
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 6.7e-35 150.6 103 68.0
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 8.8e-35 150.2 103 67.0
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.5e-34 149.4 103 69.9
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 1.5e-34 149.4 97 72.2
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 1.5e-34 149.4 103 69.9
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 2.6e-34 148.7 102 65.7
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 2.6e-34 148.7 103 69.9
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 2.6e-34 148.7 103 69.9
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 2.6e-34 148.7 103 68.0
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 4.4e-34 147.9 103 70.9
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 4.4e-34 147.9 101 71.3
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 9.7e-34 146.7 103 65.0
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 9.7e-34 146.7 92 76.1
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 1.7e-33 146.0 101 71.3
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 2.2e-33 145.6 103 66.0
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 3.7e-33 144.8 103 65.0
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 3.7e-33 144.8 103 65.0
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 6.3e-33 144.1 103 68.0
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 2.4e-32 142.1 103 64.1
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 3.5e-31 138.3 96 65.6
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 1.7e-30 136.0 92 69.6
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 6.5e-30 134.0 103 62.1
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 6.5e-30 134.0 131 51.9
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 8.5e-30 133.7 94 64.9
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 1.1e-29 133.3 103 61.2
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 7.2e-29 130.6 132 53.0
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 7.2e-29 130.6 102 61.8
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 1.6e-28 129.4 102 59.8
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 1.6e-28 129.4 101 60.4
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 2.1e-28 129.0 78 78.2
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 1.0e-27 126.7 76 81.6
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 2.3e-27 125.6 91 61.5
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 2.3e-27 125.6 103 57.3
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 2.3e-27 125.6 100 57.0
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 5.2e-27 124.4 93 62.4
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 1.5e-26 122.9 103 56.3
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 1.5e-26 122.9 76 76.3
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 5.7e-26 120.9 105 60.0
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 8.2e-25 117.1 76 72.4
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 1.1e-24 116.7 75 73.3
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.8e-24 115.9 70 80.0
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.8e-24 115.9 70 80.0
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 3.1e-24 115.2 96 55.2
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 2.0e-23 112.5 86 65.1
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 3.5e-23 111.7 93 53.8
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 2.2e-22 109.0 75 66.7
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 6.1e-20 100.9 84 56.0
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 6.1e-20 100.9 103 53.4
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 8.8e-19 97.1 111 50.5
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 2.0e-18 95.9 96 55.2
Sed0003931 Sechium edule HOM05D005747 ORTHO05D007159 2.0e-18 95.9 64 65.6
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 4.5e-15 84.7 50 82.0
Lalb_Chr02g0156001 Lupinus albus HOM05D005747 ORTHO05D007159 4.5e-15 84.7 80 57.5
MCO03G507 Micromonas commoda HOM05D005747 ORTHO05D007159 1.6e-12 76.3 90 41.1
COL.COLO4_26972 Corchorus olitorius HOM05D005747 ORTHO05D007159 1.0e-11 73.6 44 72.7
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 6.3e-09 64.3 52 61.5
Os11g0568633 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 7.0e-08 60.8 42 59.5


User provided reference genes

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