Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g39380 Schrenkiella parvula HOM05D006544 ORTHO05D008757 8.7e-125 450.3 222 100.0
BcaB05g21832 Brassica carinata HOM05D006544 ORTHO05D008757 2.0e-113 412.5 222 92.3
AL8G27480 Arabidopsis lyrata HOM05D006544 ORTHO05D008757 3.3e-108 395.2 225 89.3
Thhalv10014610m.g Eutrema salsugineum HOM05D006544 ORTHO05D008757 5.3e-106 387.9 225 89.3
Carub.0008s1316 Capsella rubella HOM05D006544 ORTHO05D008757 9.0e-106 387.1 223 88.3
BcaC03g13011 Brassica carinata HOM05D006544 ORTHO05D008757 7.6e-105 384.0 222 88.3
BolC2t06093H Brassica oleracea HOM05D006544 ORTHO05D008757 3.8e-104 381.7 223 88.3
AT5G52970 Arabidopsis thaliana HOM05D006544 ORTHO05D008757 5.0e-104 381.3 225 87.1
C02p01030 Brassica napus HOM05D006544 ORTHO05D008757 5.0e-104 381.3 223 88.3
BraA02t04758Z Brassica rapa HOM05D006544 ORTHO05D008757 1.9e-103 379.4 222 86.5
CARHR265950 Cardamine hirsuta HOM05D006544 ORTHO05D008757 1.8e-101 372.9 224 83.9
Aa31LG1G21780 Aethionema arabicum HOM05D006544 ORTHO05D008757 5.9e-97 357.8 224 81.2
THA.LOC104816347 Tarenaya hassleriana HOM05D006544 ORTHO05D008757 3.2e-95 352.1 223 78.5
Duzib093G0756 Durio zibethinus HOM05D006544 ORTHO05D008757 3.1e-90 335.5 220 76.8
Potri.016G092300 Populus trichocarpa HOM05D006544 ORTHO05D008757 2.6e-89 332.4 182 87.9
Ciclev10012670m.g Citrus clementina HOM05D006544 ORTHO05D008757 3.4e-89 332.0 210 77.6
Thecc.05G065700 Theobroma cacao HOM05D006544 ORTHO05D008757 3.4e-89 332.0 194 83.0
TWI74G1602 Tripterygium wilfordii HOM05D006544 ORTHO05D008757 8.5e-88 327.4 228 73.7
Solyc10g084040.2 Solanum lycopersicum HOM05D006544 ORTHO05D008757 7.2e-87 324.3 222 74.3
MD12G1113500 Malus domestica HOM05D006544 ORTHO05D008757 9.4e-87 323.9 201 78.6
Sed0018427 Sechium edule HOM05D006544 ORTHO05D008757 1.2e-86 323.6 203 78.3
RcHm_v2.0_Chr3g0470171 Rosa chinensis HOM05D006544 ORTHO05D008757 2.7e-86 322.4 223 72.6
TAR636G3123 Trochodendron aralioides HOM05D006544 ORTHO05D008757 3.6e-86 322.0 217 72.8
Dinv37314 Davidia involucrata HOM05D006544 ORTHO05D008757 4.7e-86 321.6 227 70.9
Gohir.A09G147100 Gossypium hirsutum HOM05D006544 ORTHO05D008757 4.7e-86 321.6 181 86.2
PGSC0003DMG400010472 Solanum tuberosum HOM05D006544 ORTHO05D008757 4.7e-86 321.6 179 86.0
Sopen10g033470 Solanum pennellii HOM05D006544 ORTHO05D008757 1.0e-85 320.5 179 86.0
CsaV3_6G039870 Cucumis sativus L. HOM05D006544 ORTHO05D008757 2.3e-85 319.3 219 74.4
CAN.G1169.17 Capsicum annuum HOM05D006544 ORTHO05D008757 3.0e-85 318.9 179 86.0
QL07p043583 Quercus lobata HOM05D006544 ORTHO05D008757 3.0e-85 318.9 181 85.1
MELO3C024463.2 Cucumis melo HOM05D006544 ORTHO05D008757 8.8e-85 317.4 218 72.5
HanXRQChr13g0401051 Helianthus annuus HOM05D006544 ORTHO05D008757 8.8e-85 317.4 179 85.5
Nitab4.5_0000063g0030 Nicotiana tabacum HOM05D006544 ORTHO05D008757 8.8e-85 317.4 179 85.5
ClCG04G009280 Citrullus lanatus HOM05D006544 ORTHO05D008757 1.1e-84 317.0 210 76.2
Gohir.D09G142700 Gossypium hirsutum HOM05D006544 ORTHO05D008757 1.1e-84 317.0 181 84.5
FvH4_6g16320 Fragaria vesca HOM05D006544 ORTHO05D008757 1.5e-84 316.6 182 83.0
PSO339G0933 Papaver somniferum HOM05D006544 ORTHO05D008757 2.6e-84 315.8 223 70.0
DCAR_020819 Daucus carota HOM05D006544 ORTHO05D008757 3.3e-84 315.5 197 78.7
CiPaw.09G172700 Carya illinoinensis HOM05D006544 ORTHO05D008757 4.4e-84 315.1 173 86.1
GSVIVG01025731001 Vitis vinifera HOM05D006544 ORTHO05D008757 9.7e-84 313.9 184 82.6
FAN05G5519 Fragaria x ananassa HOM05D006544 ORTHO05D008757 1.3e-83 313.5 222 71.6
FAN09G3810 Fragaria x ananassa HOM05D006544 ORTHO05D008757 1.3e-83 313.5 223 71.7
Gorai.006G164200 Gossypium raimondii HOM05D006544 ORTHO05D008757 1.3e-83 313.5 215 75.3
Lalb_Chr06g0171711 Lupinus albus HOM05D006544 ORTHO05D008757 2.2e-83 312.8 197 77.2
Manes.09G066600 Manihot esculenta HOM05D006544 ORTHO05D008757 2.8e-83 312.4 201 76.6
Eucgr.A01683 Eucalyptus grandis HOM05D006544 ORTHO05D008757 8.2e-83 310.8 192 79.2
Nn2g11585 Nelumbo nucifera HOM05D006544 ORTHO05D008757 8.2e-83 310.8 184 82.1
MBI18_g04983_MAGBIO Magnolia biondii HOM05D006544 ORTHO05D008757 1.4e-82 310.1 181 81.8
Actinidia28904 Actinidia chinensis HOM05D006544 ORTHO05D008757 1.8e-82 309.7 181 81.8
ECA233G4064 Erigeron canadensis HOM05D006544 ORTHO05D008757 2.4e-82 309.3 217 71.9
Cfa017605 Carpinus fangiana HOM05D006544 ORTHO05D008757 4.1e-82 308.5 219 72.6
Lj5g0006333 Lotus japonicus HOM05D006544 ORTHO05D008757 5.3e-82 308.1 211 72.0
PGR004G0128 Punica granatum HOM05D006544 ORTHO05D008757 7.0e-82 307.8 233 69.1
PSO801G0526 Papaver somniferum HOM05D006544 ORTHO05D008757 9.1e-82 307.4 184 80.4
SGA_v2.0_scaffold224G42946 Striga asiatica HOM05D006544 ORTHO05D008757 9.1e-82 307.4 188 79.3
COL.COLO4_26969 Corchorus olitorius HOM05D006544 ORTHO05D008757 2.0e-81 306.2 221 71.5
Oeu016983.1 Olea europaea HOM05D006544 ORTHO05D008757 1.3e-80 303.5 225 69.3
Glyma.10G056700 Glycine max HOM05D006544 ORTHO05D008757 1.7e-80 303.1 175 83.4
Nitab4.5_0010279g0020 Nicotiana tabacum HOM05D006544 ORTHO05D008757 2.2e-80 302.8 206 73.8
Sc02g0001640 Simmondsia chinensis HOM05D006544 ORTHO05D008757 2.2e-80 302.8 178 81.5
Lsat_1_v5_gn_6_25121 Lactuca sativa HOM05D006544 ORTHO05D008757 2.9e-80 302.4 193 75.6
CANSAT80G1747 Cannabis sativa HOM05D006544 ORTHO05D008757 3.8e-80 302.0 179 79.9
arahy.Tifrunner.gnm1.ann1.4P9CL0 Arachis hypogaea HOM05D006544 ORTHO05D008757 8.5e-80 300.8 192 76.0
arahy.Tifrunner.gnm1.ann1.8Z8BZM Arachis hypogaea HOM05D006544 ORTHO05D008757 8.5e-80 300.8 192 76.0
Peaxi162Scf00311g00059 Petunia axillaris HOM05D006544 ORTHO05D008757 1.1e-79 300.4 201 74.6
SalBow5G2848 Salvia bowleyana HOM05D006544 ORTHO05D008757 2.5e-79 299.3 179 78.8
unitig_578.g16041 Utricularia gibba HOM05D006544 ORTHO05D008757 2.5e-79 299.3 181 79.0
ATR1093G019 Amborella trichopoda HOM05D006544 ORTHO05D008757 3.2e-79 298.9 183 78.1
Cc06_g04210 Coffea canephora HOM05D006544 ORTHO05D008757 3.2e-79 298.9 181 78.5
Aqoxy2G01774 Aquilegia oxysepala HOM05D006544 ORTHO05D008757 4.2e-79 298.5 225 70.2
Medtr1g063350 Medicago truncatula HOM05D006544 ORTHO05D008757 5.5e-79 298.1 197 74.1
EL10Ac7g16625 Beta vulgaris HOM05D006544 ORTHO05D008757 1.2e-78 297.0 209 70.8
CDE09G0170 Ceratophyllum demersum HOM05D006544 ORTHO05D008757 1.2e-78 297.0 183 74.9
Migut.L01701 Erythranthe guttata HOM05D006544 ORTHO05D008757 2.1e-78 296.2 175 80.6
Psat6g072960 Pisum sativum HOM05D006544 ORTHO05D008757 3.6e-78 295.4 229 68.6
Ca_11495_v3 Cicer arietinum L. HOM05D006544 ORTHO05D008757 4.7e-78 295.0 229 66.4
Phvul.007G219800 Phaseolus vulgaris HOM05D006544 ORTHO05D008757 1.4e-77 293.5 173 81.5
MSTRG.10320 Avicennia marina HOM05D006544 ORTHO05D008757 1.8e-77 293.1 180 76.7
TPR.G11258 Trifolium pratense HOM05D006544 ORTHO05D008757 3.0e-77 292.4 176 81.2
VMungo0720G1694 Vigna mungo HOM05D006544 ORTHO05D008757 3.0e-77 292.4 172 82.6
HPP92_009890 Vanilla planifolia HOM05D006544 ORTHO05D008757 2.0e-76 289.7 181 76.8
Sabra16G0097900 Salix brachista HOM05D006544 ORTHO05D008757 2.6e-76 289.3 276 58.3
Lj2A122G33 Lonicera japonica HOM05D006544 ORTHO05D008757 3.3e-76 288.9 156 85.9
AUR62042496 Chenopodium quinoa HOM05D006544 ORTHO05D008757 1.3e-75 287.0 233 66.5
FAN14G3080 Fragaria x ananassa HOM05D006544 ORTHO05D008757 1.3e-75 287.0 182 77.5
vmacro07290 Vaccinium macrocarpon HOM05D006544 ORTHO05D008757 1.7e-75 286.6 163 84.0
SEGI_38453 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 3.7e-75 285.4 209 67.0
AUR62040358 Chenopodium quinoa HOM05D006544 ORTHO05D008757 6.3e-75 284.6 160 84.4
Ah.15g092510 Amaranthus hybridus HOM05D006544 ORTHO05D008757 5.3e-74 281.6 156 85.3
Prupe.6G232400 Prunus persica HOM05D006544 ORTHO05D008757 2.2e-72 276.2 168 82.1
Zm00001eb088350 Zea mays HOM05D006544 ORTHO05D008757 8.5e-72 274.2 166 77.1
Pp3c13_11800 Physcomitrium patens HOM05D006544 ORTHO05D008757 3.7e-67 258.8 169 75.7
Mapoly0064s0090 Marchantia polymorpha HOM05D006544 ORTHO05D008757 1.2e-65 253.8 173 70.5
Rhsim03G0092100 Rhododendron simsii HOM05D006544 ORTHO05D008757 1.2e-65 253.8 237 57.4
SMO118G0079 Selaginella moellendorffii HOM05D006544 ORTHO05D008757 3.2e-63 245.7 147 77.6
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis HOM05D006544 ORTHO05D008757 1.4e-58 230.3 154 74.7
Cpa.g.sc54.75 Carica papaya HOM05D006544 ORTHO05D008757 7.0e-58 228.0 118 89.8
Cre15.g636050 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D008757 2.9e-56 222.6 164 67.1
SEGI_20985 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 6.6e-56 221.5 122 82.8
CBR_g11899 Chara braunii HOM05D006544 ORTHO05D008757 3.3e-55 219.2 173 60.1
AagrBONN_evm.TU.Sc2ySwM_344.816 Anthoceros agrestis HOM05D006544 ORTHO05D008757 1.7e-51 206.8 122 76.2
MCO09G250 Micromonas commoda HOM05D006544 ORTHO05D008757 6.6e-48 194.9 180 52.8
PRCOL_00002491 Prasinoderma coloniale HOM05D006544 ORTHO05D008757 6.6e-48 194.9 181 55.8
Os07g0534000 Oryza sativa ssp. japonica HOM05D006544 ORTHO05D008757 1.9e-42 176.8 118 68.6
Cpa.g.sc4277.1 Carica papaya HOM05D006544 ORTHO05D008757 5.4e-42 175.3 115 75.7
Cpa.g.sc54.73 Carica papaya HOM05D006544 ORTHO05D008757 5.4e-42 175.3 115 75.7
Lj5g0024591 Lotus japonicus HOM05D006544 ORTHO05D008757 6.0e-41 171.8 99 79.8
CSS0000889 Camellia sinensis var. sinensis HOM05D006544 ORTHO05D008757 2.5e-39 166.4 152 57.2
Medtr5g037320 Medicago truncatula HOM05D006544 ORTHO05D008757 1.5e-28 130.6 111 63.1
HPP92_009894 Vanilla planifolia HOM05D006544 ORTHO05D008757 2.1e-25 120.2 65 81.5
Hund20313 Selenicereus undatus HOM05D006544 ORTHO05D008757 7.8e-25 118.2 72 80.6
CBR_g20266 Chara braunii HOM05D006544 ORTHO05D021234 4.9e-19 99.0 166 37.3
AagrBONN_evm.TU.Sc2ySwM_368.258 Anthoceros agrestis HOM05D006544 ORTHO05D021234 9.3e-18 94.7 126 35.7
Nn2g13777 Nelumbo nucifera HOM05D006544 ORTHO05D008757 1.3e-16 90.9 62 71.0
Cpa.g.sc54.74 Carica papaya HOM05D006544 ORTHO05D008757 1.5e-15 87.4 102 52.0
SEGI_36386 Sequoiadendron giganteum HOM05D006544 ORTHO05D021234 4.3e-15 85.9 129 34.9
SalBow5G0971 Salvia bowleyana HOM05D008540 ORTHO05D009454 1.6e-14 84.0 48 79.2
HPP92_009893 Vanilla planifolia HOM05D006544 ORTHO05D008757 5.3e-13 79.0 61 68.9
Cre03.g154600 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D021234 1.1e-07 61.2 170 25.3
MCO12G278 Micromonas commoda HOM05D006544 ORTHO05D021234 5.6e-07 58.9 124 26.6


User provided reference genes

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