Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g38660 Schrenkiella parvula HOM05D008152 ORTHO05D010231 2.7e-24 114.4 54 100.0
C02p01660 Brassica napus HOM05D008152 ORTHO05D010231 1.5e-17 92.0 56 82.1
BcaB05g21787 Brassica carinata HOM05D008152 ORTHO05D010231 2.5e-17 91.3 58 82.8
BolC9t60014H Brassica oleracea HOM05D008152 ORTHO05D010231 5.5e-17 90.1 52 86.5
A10p32040 Brassica napus HOM05D008152 ORTHO05D010231 1.6e-16 88.6 52 84.6
BraA10t45248Z Brassica rapa HOM05D008152 ORTHO05D010231 2.1e-16 88.2 52 84.6
C09p72760 Brassica napus HOM05D008152 ORTHO05D010231 3.6e-16 87.4 52 84.6
BolC2t06131H Brassica oleracea HOM05D008152 ORTHO05D010231 3.6e-16 87.4 54 81.5
BraA02t04797Z Brassica rapa HOM05D008152 ORTHO05D010231 6.8e-15 83.2 52 76.9
CARHR209180 Cardamine hirsuta HOM05D008152 ORTHO05D010231 5.7e-14 80.1 51 82.4
BcaC03g12967 Brassica carinata HOM05D003180 ORTHO05D014840 3.2e-12 74.3 54 75.9
BcaC06g32113 Brassica carinata HOM05D008152 ORTHO05D010231 4.1e-12 73.9 53 73.6
Carub.0006s0304 Capsella rubella HOM05D008152 ORTHO05D010231 4.1e-12 73.9 50 76.0
AL6G13710 Arabidopsis lyrata HOM05D008152 ORTHO05D010231 9.2e-12 72.8 45 80.0
AT5G04080 Arabidopsis thaliana HOM05D008152 ORTHO05D010231 1.6e-11 72.0 46 80.4
BcaB01g05765 Brassica carinata HOM05D008152 ORTHO05D010231 2.7e-11 71.2 53 73.6
A03p01520 Brassica napus HOM05D008152 ORTHO05D010231 5.9e-11 70.1 53 73.6
BraA03t09529Z Brassica rapa HOM05D008152 ORTHO05D010231 5.9e-11 70.1 53 73.6
C03p01870 Brassica napus HOM05D008152 ORTHO05D010231 1.3e-10 68.9 53 71.7
BolC3t12740H Brassica oleracea HOM05D008152 ORTHO05D010231 1.3e-10 68.9 53 71.7
Thhalv10015225m.g Eutrema salsugineum HOM05D008152 ORTHO05D010231 1.9e-09 65.1 52 67.3
BcaB01g05882 Brassica carinata HOM05D008152 ORTHO05D010231 3.3e-09 64.3 53 67.9
Aa31LG1G21240 Aethionema arabicum HOM05D008152 ORTHO05D010231 7.5e-06 53.1 49 59.2


User provided reference genes

Program Settings