Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 1.1e-275 952.6 459 100.0
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 3.0e-273 944.5 459 97.8
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 4.1e-270 934.1 459 96.9
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 1.2e-269 932.6 459 96.9
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 1.6e-269 932.2 459 94.8
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 4.5e-269 930.6 459 94.6
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 5.9e-269 930.2 459 94.8
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 5.9e-269 930.2 459 94.8
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 1.3e-268 929.1 459 96.3
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 4.2e-267 924.1 459 95.9
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 6.3e-263 910.2 486 89.7
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 4.1e-254 880.9 460 87.4
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 3.9e-244 847.8 459 84.5
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 3.9e-244 847.8 459 84.7
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 3.3e-243 844.7 459 83.7
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 5.2e-241 837.4 459 83.4
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.5e-240 835.9 459 83.0
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 9.8e-240 833.2 459 82.4
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 1.3e-239 832.8 459 81.7
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 1.1e-238 829.7 475 80.2
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 2.1e-237 825.5 459 81.9
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 4.6e-237 824.3 461 81.6
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 2.3e-236 822.0 459 81.7
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 5.1e-236 820.8 460 81.3
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 8.6e-236 820.1 460 82.0
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 8.6e-236 820.1 461 82.0
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 2.5e-235 818.5 460 80.9
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 5.6e-235 817.4 459 81.0
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 7.3e-235 817.0 459 80.4
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.2e-234 816.2 461 81.8
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.1e-234 815.5 459 82.8
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.8e-233 812.4 461 81.6
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 3.1e-233 811.6 460 80.9
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 8.9e-233 810.1 459 80.4
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 8.9e-233 810.1 459 80.0
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 1.2e-232 809.7 461 80.5
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 2.0e-232 808.9 459 80.0
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 3.4e-232 808.1 461 80.5
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 3.4e-232 808.1 459 79.7
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 5.8e-232 807.4 459 79.7
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 9.9e-232 806.6 459 79.5
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 9.9e-232 806.6 459 80.0
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.2e-231 805.4 460 80.7
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 2.2e-231 805.4 460 80.7
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 8.4e-231 803.5 481 77.3
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 3.2e-230 801.6 459 81.7
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 4.1e-230 801.2 459 79.7
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 7.1e-230 800.4 459 79.5
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 7.1e-230 800.4 460 79.1
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 7.1e-230 800.4 460 79.6
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 9.2e-230 800.0 460 80.0
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 1.6e-229 799.3 460 80.4
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 2.7e-229 798.5 459 79.7
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 1.3e-228 796.2 460 78.0
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.5e-227 792.7 461 78.1
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 1.9e-227 792.3 459 78.9
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 5.6e-227 790.8 459 79.1
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 2.1e-226 788.9 460 78.5
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.8e-226 788.5 459 81.3
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 2.8e-226 788.5 460 80.7
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 4.7e-226 787.7 458 78.6
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 3.1e-225 785.0 461 78.3
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 4.0e-225 784.6 459 78.6
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 5.2e-225 784.3 460 77.8
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 2.0e-224 782.3 460 77.6
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.3e-223 779.6 460 77.4
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 6.4e-223 777.3 459 77.3
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.7e-220 769.2 455 77.4
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.9e-219 765.8 460 79.3
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 3.3e-219 765.0 459 78.9
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 9.6e-219 763.5 460 79.3
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.6e-218 762.7 462 75.3
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 4.8e-218 761.1 460 75.7
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.4e-217 759.6 443 77.7
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 1.7e-215 752.7 497 71.4
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.9e-214 749.2 459 74.5
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 2.1e-213 745.7 459 75.4
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.3e-212 743.0 458 74.2
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 2.8e-210 735.3 459 74.5
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 2.7e-205 718.8 464 72.8
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.6e-202 709.5 460 72.2
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 6.9e-201 704.1 460 70.2
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.5e-200 703.0 459 71.0
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 3.9e-196 688.3 498 66.5
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 6.9e-185 651.0 454 68.5
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 1.5e-179 633.3 458 66.2
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 9.7e-179 630.6 450 63.3
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 1.4e-177 626.7 393 73.0
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.2e-176 623.6 450 63.3
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.9e-175 619.0 456 64.3
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 2.5e-174 615.9 462 63.4
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 7.9e-173 610.9 340 82.1
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.2e-172 608.2 338 82.2
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.0e-171 606.3 338 82.2
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.8e-170 602.4 338 82.2
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.9e-166 589.7 338 81.1
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.0e-164 583.9 341 79.5
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.0e-164 583.9 341 79.5
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 2.3e-164 582.8 338 81.7
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 2.8e-162 575.9 464 59.7
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 9.1e-161 570.9 337 81.6
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 1.2e-160 570.5 323 81.1
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.9e-159 565.8 337 77.4
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.0e-156 557.4 296 85.8
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.2e-148 528.5 290 82.8
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.3e-146 523.9 304 83.6
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 1.7e-143 513.5 337 76.6
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 3.8e-143 512.3 313 81.2
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.2e-136 490.7 291 77.7
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 2.3e-132 476.5 338 66.3
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 4.1e-129 465.7 279 76.3
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 1.7e-119 433.7 281 71.9
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 1.8e-100 370.5 449 40.1
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 1.8e-87 327.4 486 35.2
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 3.1e-68 263.5 164 71.3
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 3.1e-52 210.3 163 60.7
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.0e-46 191.0 110 80.9
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.0e-46 191.0 110 80.9
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.4e-46 189.9 110 80.0
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 8.8e-39 165.6 98 78.6
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.1e-15 89.0 40 100.0


User provided reference genes

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