Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 3.5e-85 318.2 152 100.0
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 3.2e-70 268.5 152 85.5
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 2.5e-67 258.8 152 83.6
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 2.1e-66 255.8 152 82.9
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 2.8e-66 255.4 152 82.9
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 8.2e-66 253.8 152 82.2
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 1.2e-64 250.0 152 80.9
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 1.5e-64 249.6 152 80.3
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 1.7e-63 246.1 152 78.9
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 1.2e-61 240.0 143 82.5
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 1.2e-56 223.4 154 71.4
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 3.2e-54 215.3 150 68.7
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 3.6e-53 211.8 150 66.7
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 2.3e-52 209.1 150 68.0
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 3.0e-52 208.8 150 65.3
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 3.9e-52 208.4 147 67.3
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 1.1e-51 206.8 150 65.3
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 1.5e-51 206.5 148 66.2
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 2.0e-51 206.1 147 66.7
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 2.0e-51 206.1 147 66.7
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 2.6e-51 205.7 150 66.0
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 4.4e-51 204.9 150 64.7
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 7.4e-51 204.1 150 64.0
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 9.7e-51 203.8 148 65.5
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 2.2e-50 202.6 150 63.3
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 8.2e-50 200.7 151 62.3
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 1.4e-49 199.9 151 62.3
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 1.8e-49 199.5 151 61.6
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 2.4e-49 199.1 154 61.0
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 2.4e-49 199.1 150 62.7
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 5.3e-49 198.0 149 62.4
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 5.3e-49 198.0 149 61.1
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 9.1e-49 197.2 149 64.4
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 2.6e-48 195.7 153 61.4
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.4e-48 195.3 149 63.1
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 5.9e-48 194.5 151 62.9
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 1.3e-47 193.4 147 66.0
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 1.3e-47 193.4 151 62.9
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.3e-47 193.4 149 62.4
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 1.3e-47 193.4 149 64.4
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 1.3e-47 193.4 149 61.7
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 1.7e-47 193.0 149 61.7
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 2.2e-47 192.6 149 61.7
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 8.5e-47 190.7 141 63.8
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 1.1e-46 190.3 150 60.0
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 1.1e-46 190.3 141 66.7
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 1.4e-46 189.9 153 60.1
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 2.5e-46 189.1 148 60.8
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 3.2e-46 188.7 149 59.7
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 5.5e-46 188.0 150 62.7
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 9.4e-46 187.2 149 59.1
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 1.2e-45 186.8 147 62.6
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 2.1e-45 186.0 143 62.9
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 2.1e-45 186.0 148 59.5
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 7.9e-45 184.1 153 61.4
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 7.9e-45 184.1 140 63.6
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 1.0e-44 183.7 145 60.7
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 1.4e-44 183.3 153 61.4
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 2.3e-44 182.6 146 59.6
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 3.0e-44 182.2 152 58.6
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 3.0e-44 182.2 149 59.1
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 6.7e-44 181.0 150 60.0
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 8.8e-44 180.6 139 62.6
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 8.8e-44 180.6 146 60.3
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 1.1e-43 180.3 147 56.5
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 1.5e-43 179.9 112 76.8
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 2.6e-43 179.1 145 61.4
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 3.3e-43 178.7 147 55.8
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 1.3e-42 176.8 144 63.2
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 1.7e-42 176.4 145 60.7
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 2.8e-42 175.6 140 58.6
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 6.3e-42 174.5 148 59.5
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 5.3e-41 171.4 200 46.5
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 5.3e-41 171.4 178 51.1
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 1.6e-40 169.9 148 56.1
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 2.6e-40 169.1 139 57.6
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 7.7e-40 167.5 162 51.9
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 1.0e-39 167.2 149 55.0
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.2e-39 166.0 139 55.4
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 3.8e-39 165.2 131 61.1
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.8e-39 165.2 140 59.3
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.5e-38 163.3 141 55.3
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 5.5e-38 161.4 147 52.4
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 9.7e-35 150.6 154 48.7
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 1.0e-31 140.6 163 44.8
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 4.2e-30 135.2 128 50.0
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 1.6e-24 116.7 147 41.5
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 2.9e-23 112.5 63 82.5
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 6.5e-23 111.3 105 52.4
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 2.1e-21 106.3 141 39.0
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.3e-15 87.0 71 63.4
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 4.7e-13 78.6 84 42.9
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 8.0e-13 77.8 105 40.0
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 1.4e-12 77.0 60 60.0
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 4.9e-10 68.6 77 44.2
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 6.4e-10 68.2 64 53.1
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 8.3e-10 67.8 77 44.2


User provided reference genes

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