Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 1.0e-151 540.0 268 100.0
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 5.4e-137 491.1 269 91.8
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 1.7e-135 486.1 262 91.6
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 2.9e-135 485.3 262 92.4
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 2.9e-135 485.3 262 92.4
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 2.9e-135 485.3 271 90.4
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 3.8e-135 485.0 262 92.0
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 5.2e-132 474.6 266 88.7
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 4.4e-131 471.5 250 93.6
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 1.9e-126 456.1 263 87.1
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 3.5e-112 408.7 266 77.8
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 3.1e-108 395.6 271 73.4
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 4.0e-108 395.2 271 73.1
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 1.3e-106 390.2 262 73.7
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 1.6e-104 383.3 264 73.1
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.6e-104 383.3 264 72.0
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 2.1e-104 382.9 278 71.2
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 2.1e-104 382.9 265 71.7
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 1.3e-103 380.2 208 89.4
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 1.1e-102 377.1 267 73.0
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.1e-100 370.5 273 68.5
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 4.0e-100 368.6 281 68.3
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 6.8e-100 367.9 255 71.4
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 8.9e-100 367.5 276 69.6
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 1.2e-99 367.1 268 69.0
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 2.6e-99 365.9 295 64.7
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 7.6e-99 364.4 271 67.9
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 7.6e-99 364.4 266 68.8
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 2.2e-98 362.8 267 68.5
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 2.9e-98 362.5 190 92.6
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 2.4e-97 359.4 273 67.4
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 5.4e-97 358.2 266 68.0
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.2e-96 357.1 272 66.9
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 1.6e-96 356.7 271 69.0
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 2.1e-96 356.3 267 67.4
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 2.1e-96 356.3 300 63.0
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 2.7e-96 355.9 272 68.4
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 2.3e-95 352.8 272 64.0
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 3.9e-95 352.1 268 64.6
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 1.5e-94 350.1 274 67.9
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 1.5e-94 350.1 260 66.5
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 1.9e-94 349.7 266 67.3
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 1.9e-94 349.7 272 65.4
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 4.3e-94 348.6 273 68.1
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 4.3e-94 348.6 278 64.4
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 5.6e-94 348.2 271 64.2
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 7.3e-94 347.8 272 65.4
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 9.6e-94 347.4 315 59.4
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 1.6e-93 346.7 188 91.0
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 2.1e-93 346.3 268 65.3
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.6e-93 345.5 264 66.3
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 4.7e-93 345.1 273 64.5
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 6.2e-93 344.7 268 66.4
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.8e-92 343.2 267 65.5
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 2.4e-92 342.8 268 65.3
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 9.0e-92 340.9 318 58.2
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 1.2e-91 340.5 269 63.6
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 2.0e-91 339.7 265 66.4
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 2.6e-91 339.3 268 64.6
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 2.6e-91 339.3 272 61.4
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 4.4e-91 338.6 273 63.4
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 9.9e-91 337.4 349 54.2
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 3.8e-90 335.5 293 63.1
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 8.4e-90 334.3 225 69.3
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 2.4e-89 332.8 222 76.1
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 4.2e-89 332.0 281 59.1
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 2.1e-88 329.7 270 61.9
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 2.7e-88 329.3 269 61.0
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 3.5e-88 328.9 279 63.8
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 1.0e-87 327.4 267 64.4
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 1.3e-87 327.0 315 57.8
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 6.6e-87 324.7 265 63.8
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 1.9e-86 323.2 265 64.2
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 1.6e-85 320.1 223 69.1
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 3.1e-84 315.8 270 58.9
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 4.0e-84 315.5 227 68.7
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 6.9e-84 314.7 245 66.5
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 1.5e-83 313.5 271 62.0
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 8.4e-82 307.8 246 64.2
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 2.1e-80 303.1 272 61.8
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 2.1e-80 303.1 267 59.9
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 7.9e-80 301.2 303 55.1
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.0e-79 299.3 242 63.6
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 2.8e-77 292.7 178 77.0
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 2.4e-76 289.7 204 69.6
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 2.0e-75 286.6 244 60.2
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 5.8e-75 285.0 263 60.8
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 2.2e-74 283.1 182 72.0
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 6.4e-74 281.6 189 73.0
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 1.4e-73 280.4 189 72.0
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 2.1e-72 276.6 190 71.6
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 5.6e-70 268.5 271 53.9
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 3.7e-69 265.8 244 59.0
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 5.3e-68 261.9 244 57.0
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 1.5e-67 260.4 136 91.9
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 2.9e-66 256.1 212 57.1
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 3.2e-65 252.7 271 50.9
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 3.9e-63 245.7 194 62.4
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 3.4e-59 232.6 285 48.8
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 4.5e-59 232.3 290 44.1
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 7.4e-54 214.9 167 54.5
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 3.7e-53 212.6 166 56.6
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 4.8e-53 212.2 198 50.0
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 6.5e-50 201.8 206 50.5
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 5.7e-46 188.7 191 56.5
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 3.1e-44 183.0 135 68.1
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 6.1e-40 168.7 190 53.7
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 3.3e-38 162.9 230 37.0
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.8e-31 140.6 224 41.1
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 4.1e-28 129.4 106 61.3
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 3.0e-23 113.2 92 62.0
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 2.6e-22 110.2 94 53.2
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 1.3e-18 97.8 59 74.6
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 2.3e-18 97.1 90 53.3
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 8.6e-18 95.1 59 76.3
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.4e-15 87.8 98 49.0
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 2.6e-14 83.6 91 45.1
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 2.4e-12 77.0 76 53.9
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 4.1e-12 76.3 84 52.4
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 3.6e-08 63.2 78 50.0


User provided reference genes

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