Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 5.2e-87 324.3 161 100.0
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 1.2e-78 296.6 161 88.2
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 8.3e-77 290.4 161 86.3
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 3.2e-76 288.5 161 85.7
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 1.6e-75 286.2 161 85.1
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 2.1e-75 285.8 161 85.1
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 6.0e-75 284.3 161 84.5
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 3.0e-74 282.0 159 84.9
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 6.6e-74 280.8 159 83.6
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 1.1e-73 280.0 159 84.9
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 1.1e-73 280.0 159 84.9
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 4.7e-72 274.6 159 81.8
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 2.4e-71 272.3 148 87.8
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 2.6e-70 268.9 146 87.7
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 3.8e-69 265.0 146 86.3
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 3.2e-68 261.9 161 80.1
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 3.2e-68 261.9 146 84.2
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 1.2e-67 260.0 155 79.4
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 3.0e-66 255.4 163 76.7
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 4.3e-65 251.5 151 77.5
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 2.5e-57 225.7 148 70.3
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 3.3e-57 225.3 156 66.7
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 4.3e-57 224.9 159 68.6
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 5.6e-57 224.6 143 72.7
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 7.3e-57 224.2 148 71.6
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 9.6e-57 223.8 157 65.6
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 2.1e-56 222.6 148 70.3
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 2.8e-56 222.2 148 68.2
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 2.8e-56 222.2 148 69.6
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 2.8e-56 222.2 157 69.4
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 2.8e-56 222.2 143 72.0
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 2.8e-56 222.2 142 73.9
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 2.8e-56 222.2 146 71.2
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 3.6e-56 221.9 148 70.9
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 3.6e-56 221.9 148 70.9
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 3.6e-56 221.9 160 66.2
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 3.6e-56 221.9 154 63.6
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 3.6e-56 221.9 148 68.9
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 4.8e-56 221.5 154 66.2
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 4.8e-56 221.5 148 69.6
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 6.2e-56 221.1 149 69.1
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 8.1e-56 220.7 156 66.0
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 8.1e-56 220.7 148 70.3
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 1.1e-55 220.3 148 68.9
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 1.8e-55 219.5 150 69.3
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 1.8e-55 219.5 157 68.8
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 2.4e-55 219.2 142 71.8
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 2.4e-55 219.2 144 70.8
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 2.4e-55 219.2 151 69.5
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 2.4e-55 219.2 148 66.2
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 3.1e-55 218.8 154 68.2
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 3.1e-55 218.8 157 68.2
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 3.1e-55 218.8 157 66.2
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 3.1e-55 218.8 148 68.9
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 4.0e-55 218.4 145 69.7
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 4.0e-55 218.4 156 66.0
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 5.3e-55 218.0 148 64.9
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 5.3e-55 218.0 148 67.6
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 5.3e-55 218.0 154 67.5
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 6.9e-55 217.6 157 65.6
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 1.2e-54 216.9 152 68.4
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 1.2e-54 216.9 148 68.2
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 1.5e-54 216.5 155 65.8
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 1.5e-54 216.5 154 65.6
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 1.5e-54 216.5 158 65.2
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 2.0e-54 216.1 148 68.2
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 2.0e-54 216.1 148 65.5
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 2.6e-54 215.7 157 66.2
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 3.4e-54 215.3 159 64.2
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 3.4e-54 215.3 159 64.2
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 4.5e-54 214.9 148 69.6
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 4.5e-54 214.9 155 61.3
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 5.8e-54 214.5 148 66.2
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 5.8e-54 214.5 154 65.6
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 7.6e-54 214.2 147 67.3
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 7.6e-54 214.2 147 67.3
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 7.6e-54 214.2 154 64.9
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 9.9e-54 213.8 150 66.7
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 9.9e-54 213.8 148 69.6
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 9.9e-54 213.8 145 69.0
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 1.3e-53 213.4 139 69.8
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 1.3e-53 213.4 150 67.3
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 1.3e-53 213.4 148 67.6
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 2.9e-53 212.2 142 70.4
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 3.8e-53 211.8 155 65.8
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 8.4e-53 210.7 145 68.3
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 8.4e-53 210.7 148 67.6
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 1.1e-52 210.3 154 61.0
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 1.1e-52 210.3 151 64.9
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 1.1e-52 210.3 143 67.1
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 1.4e-52 209.9 159 64.2
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 1.9e-52 209.5 154 64.3
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 3.2e-52 208.8 154 64.9
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 4.2e-52 208.4 145 67.6
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 1.6e-51 206.5 148 66.2
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 3.5e-51 205.3 148 64.2
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 3.0e-50 202.2 148 63.5
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 3.9e-50 201.8 140 67.1
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 6.7e-50 201.1 148 62.8
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 8.7e-50 200.7 148 63.5
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 1.5e-49 199.9 148 62.8
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 2.5e-49 199.1 143 63.6
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 4.3e-49 198.4 148 60.1
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 9.6e-49 197.2 144 63.2
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 3.7e-48 195.3 149 59.7
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 6.2e-48 194.5 152 60.5
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 1.4e-47 193.4 136 67.6
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 4.0e-47 191.8 142 59.2
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 5.3e-47 191.4 152 60.5
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 6.9e-47 191.0 149 60.4
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 5.8e-46 188.0 151 57.6
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 3.5e-43 178.7 145 56.6
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 1.9e-41 172.9 119 68.1
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 3.3e-41 172.2 119 68.9
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 7.4e-41 171.0 158 48.1
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 9.0e-39 164.1 148 51.4
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 5.8e-38 161.4 131 57.3
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 1.3e-37 160.2 147 51.0
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 3.2e-36 155.6 119 60.5
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 3.2e-36 155.6 147 51.0
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 2.3e-34 149.4 157 46.5
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 5.1e-34 148.3 97 67.0
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 7.4e-33 144.4 148 46.6
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 2.2e-32 142.9 142 49.3
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 2.2e-32 142.9 133 55.6
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 2.8e-32 142.5 104 67.3
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 4.5e-30 135.2 97 61.9
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 1.4e-28 130.2 147 45.6
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 9.3e-28 127.5 97 59.8
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 9.7e-25 117.5 149 42.3
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 3.7e-24 115.5 156 40.4
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 1.5e-22 110.2 85 57.6
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 6.5e-21 104.8 87 54.0
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 2.3e-18 96.3 75 56.0


User provided reference genes

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