Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 3.3e-54 214.9 120 100.0
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 3.0e-39 165.2 103 84.5
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 3.0e-39 165.2 103 84.5
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 6.7e-39 164.1 103 83.5
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 6.7e-39 164.1 103 83.5
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 6.7e-39 164.1 103 83.5
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 4.4e-38 161.4 100 82.0
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 4.4e-38 161.4 100 82.0
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 7.4e-38 160.6 100 82.0
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 9.7e-38 160.2 101 83.2
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 7.0e-36 154.1 100 83.0
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 1.4e-33 146.4 100 75.0
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 1.5e-30 136.3 104 68.3
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 7.2e-25 117.5 108 54.6
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 1.4e-23 113.2 110 53.6
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 6.7e-23 110.9 110 53.6
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 1.2e-22 110.2 110 50.9
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 1.2e-22 110.2 106 54.7
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 2.0e-22 109.4 101 56.4
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 3.3e-22 108.6 111 50.5
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 4.4e-22 108.2 106 51.9
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 7.5e-22 107.5 109 53.2
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 1.3e-21 106.7 108 53.7
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 1.3e-21 106.7 114 48.2
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 2.2e-21 105.9 107 50.5
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 2.2e-21 105.9 109 48.6
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 3.7e-21 105.1 106 50.9
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 6.3e-21 104.4 108 49.1
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 6.3e-21 104.4 109 46.8
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 6.3e-21 104.4 106 50.0
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 6.3e-21 104.4 109 51.4
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 8.3e-21 104.0 107 51.4
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 8.3e-21 104.0 107 51.4
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 8.3e-21 104.0 107 51.4
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 8.3e-21 104.0 102 52.0
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 8.3e-21 104.0 108 51.9
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 8.3e-21 104.0 107 53.3
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 8.3e-21 104.0 111 50.5
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 1.1e-20 103.6 111 48.6
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 1.4e-20 103.2 109 46.8
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.4e-20 103.2 109 54.1
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 2.4e-20 102.4 112 49.1
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 2.4e-20 102.4 112 49.1
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 2.4e-20 102.4 109 48.6
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 3.1e-20 102.1 105 52.4
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 3.1e-20 102.1 109 50.5
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 3.1e-20 102.1 109 45.9
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 3.1e-20 102.1 96 53.1
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 5.3e-20 101.3 108 49.1
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 5.3e-20 101.3 108 49.1
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 5.3e-20 101.3 101 56.4
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 5.3e-20 101.3 107 50.5
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 7.0e-20 100.9 111 47.7
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 7.0e-20 100.9 108 50.0
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 9.1e-20 100.5 109 48.6
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 1.2e-19 100.1 111 48.6
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 1.6e-19 99.8 112 48.2
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 1.6e-19 99.8 96 52.1
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 2.0e-19 99.4 106 49.1
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 2.0e-19 99.4 108 50.9
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 3.5e-19 98.6 109 47.7
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 4.5e-19 98.2 108 50.0
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 4.5e-19 98.2 111 49.5
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 5.9e-19 97.8 110 54.5
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 5.9e-19 97.8 111 46.8
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 7.7e-19 97.4 107 49.5
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 7.7e-19 97.4 117 45.3
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 7.7e-19 97.4 109 48.6
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.7e-18 96.3 111 45.9
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 2.2e-18 95.9 111 46.8
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 3.8e-18 95.1 107 46.7
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 3.8e-18 95.1 108 48.1
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 5.0e-18 94.7 107 46.7
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 5.0e-18 94.7 101 50.5
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 5.0e-18 94.7 108 47.2
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 6.5e-18 94.4 108 48.1
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 8.5e-18 94.0 71 63.4
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 8.5e-18 94.0 110 46.4
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 2.5e-17 92.4 98 48.0
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 4.2e-17 91.7 101 49.5
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 5.5e-17 91.3 97 51.5
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 5.5e-17 91.3 109 45.9
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 5.5e-17 91.3 72 62.5
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 7.2e-17 90.9 71 59.2
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 7.2e-17 90.9 100 48.0
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 7.2e-17 90.9 101 49.5
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 9.4e-17 90.5 96 49.0
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 9.4e-17 90.5 96 51.0
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 1.2e-16 90.1 96 47.9
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.6e-16 89.7 65 66.2
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 1.6e-16 89.7 67 62.7
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 2.1e-16 89.4 70 61.4
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 2.7e-16 89.0 116 44.0
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 2.7e-16 89.0 112 49.1
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 4.7e-16 88.2 79 57.0
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 6.1e-16 87.8 107 44.9
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 5.2e-15 84.7 75 56.0
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 1.2e-14 83.6 107 43.9
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 3.7e-13 78.6 98 43.9
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 3.7e-13 78.6 103 41.7
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.4e-12 75.9 96 42.7
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.3e-10 70.1 109 43.1
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 5.0e-10 68.2 103 38.8
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 4.7e-08 61.6 64 45.3


User provided reference genes

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