Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 4.5e-73 278.1 168 100.0
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 1.4e-66 256.5 167 92.8
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 3.8e-64 248.4 167 91.0
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 3.8e-64 248.4 167 91.0
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 3.8e-64 248.4 166 91.0
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 8.4e-64 247.3 167 90.4
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 3.2e-63 245.4 160 94.4
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 4.2e-63 245.0 169 89.9
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 2.7e-62 242.3 160 93.1
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 2.8e-59 232.3 166 89.8
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 5.1e-53 211.5 173 82.7
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 1.7e-51 206.5 168 81.0
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 8.2e-51 204.1 175 82.3
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 6.9e-50 201.1 170 78.8
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 1.4e-45 186.8 196 68.9
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 1.9e-39 166.4 167 71.3
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 4.2e-39 165.2 158 65.2
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 1.8e-37 159.8 161 65.2
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 3.0e-37 159.1 162 69.1
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 6.7e-37 157.9 160 68.1
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 6.7e-37 157.9 120 71.7
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 1.1e-36 157.1 120 70.8
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 1.5e-36 156.8 163 68.7
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 2.0e-36 156.4 106 75.5
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 4.4e-36 155.2 160 64.4
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 7.5e-36 154.5 159 61.6
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 1.7e-35 153.3 161 64.0
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 2.2e-35 152.9 163 65.6
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 2.4e-34 149.4 167 59.3
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 2.4e-34 149.4 162 63.0
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 3.1e-34 149.1 109 73.4
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 7.0e-34 147.9 108 72.2
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 7.0e-34 147.9 105 74.3
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.2e-33 147.1 160 66.2
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.6e-33 146.7 160 65.6
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 2.7e-33 146.0 119 66.4
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 2.7e-33 146.0 111 69.4
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 2.7e-33 146.0 118 65.3
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 2.7e-33 146.0 160 61.2
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 4.5e-33 145.2 162 63.0
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 5.9e-33 144.8 108 67.6
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 7.7e-33 144.4 101 75.2
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 1.0e-32 144.1 101 72.3
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 1.3e-32 143.7 118 68.6
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 1.7e-32 143.3 118 64.4
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 2.2e-32 142.9 158 61.4
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 2.2e-32 142.9 124 65.3
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 2.9e-32 142.5 158 62.7
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 2.9e-32 142.5 157 68.2
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 2.9e-32 142.5 110 69.1
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 3.8e-32 142.1 122 64.8
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 5.0e-32 141.7 162 67.9
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 6.5e-32 141.4 104 73.1
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 6.5e-32 141.4 118 65.3
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 8.5e-32 141.0 110 69.1
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.1e-31 140.6 162 66.7
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 1.9e-31 139.8 101 71.3
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 1.9e-31 139.8 116 66.4
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 1.9e-31 139.8 116 66.4
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 1.9e-31 139.8 113 66.4
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 2.5e-31 139.4 109 70.6
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 3.2e-31 139.0 113 66.4
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 3.2e-31 139.0 112 66.1
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 4.2e-31 138.7 111 65.8
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 7.2e-31 137.9 157 63.7
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 1.2e-30 137.1 106 72.6
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 2.7e-30 136.0 101 71.3
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 1.4e-29 133.7 110 67.3
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 1.4e-29 133.7 168 61.3
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 1.8e-29 133.3 108 69.4
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 1.8e-29 133.3 101 71.3
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 1.8e-29 133.3 101 71.3
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 2.3e-29 132.9 119 63.9
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.3e-29 132.9 119 63.9
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.3e-29 132.9 119 63.9
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.3e-29 132.9 119 63.9
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 3.0e-29 132.5 108 68.5
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 3.0e-29 132.5 103 70.9
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 6.8e-29 131.3 109 66.1
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 8.8e-29 131.0 119 63.0
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 1.2e-28 130.6 108 62.0
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 1.5e-28 130.2 120 60.8
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 1.5e-28 130.2 105 66.7
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 1.5e-28 130.2 124 59.7
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 2.6e-28 129.4 116 62.9
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 2.6e-28 129.4 111 63.1
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 4.4e-28 128.6 111 63.1
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 1.7e-27 126.7 119 60.5
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 2.2e-27 126.3 162 58.0
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 2.2e-27 126.3 105 63.8
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 2.8e-27 125.9 101 65.3
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 3.7e-27 125.6 212 53.3
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 3.7e-27 125.6 218 53.2
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 6.3e-27 124.8 102 69.6
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 1.1e-26 124.0 112 61.6
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 1.4e-26 123.6 120 58.3
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 5.4e-26 121.7 82 76.8
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 5.4e-26 121.7 79 78.5
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 3.5e-25 119.0 106 60.4
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 5.9e-25 118.2 79 78.5
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 3.8e-24 115.5 84 73.8
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 6.5e-24 114.8 122 54.1
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 4.2e-23 112.1 110 58.2
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 5.5e-23 111.7 84 65.5
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 7.2e-23 111.3 114 50.9
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 1.2e-22 110.5 121 52.1
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 2.0e-20 103.2 91 61.5
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 2.0e-20 103.2 87 65.5
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 3.4e-20 102.4 122 50.8
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 9.8e-20 100.9 83 66.3
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 4.1e-18 95.5 173 52.0
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 2.9e-16 89.4 78 65.4
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 2.9e-16 89.4 112 48.2
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 6.1e-14 81.6 53 71.7
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 8.0e-14 81.3 81 54.3
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.6e-12 76.3 107 49.5
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 5.7e-12 75.1 81 48.1
Nitab4.5_0000784g0080 Nicotiana tabacum HOM05D006881 ORTHO05D008423 8.6e-08 61.2 116 42.2


User provided reference genes

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