Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g24920 Schrenkiella parvula HOM05D005230 ORTHO05D006506 2.9e-215 751.9 455 100.0
Thhalv10013503m.g Eutrema salsugineum HOM05D005230 ORTHO05D006506 1.2e-205 719.9 457 96.1
CARHR193430 Cardamine hirsuta HOM05D005230 ORTHO05D006506 5.1e-204 714.5 455 95.2
A10p20220 Brassica napus HOM05D005230 ORTHO05D006506 3.1e-201 705.3 457 88.6
A02p05570 Brassica napus HOM05D005230 ORTHO05D006506 7.6e-200 700.7 452 90.5
BraA10t44093Z Brassica rapa HOM05D005230 ORTHO05D006506 2.2e-199 699.1 462 87.7
BNapus_Darmor_BZH_scaffold_38p02380 Brassica napus HOM05D005230 ORTHO05D006506 1.9e-198 696.0 452 90.0
BraA02t05508Z Brassica rapa HOM05D005230 ORTHO05D006506 5.4e-198 694.5 452 89.6
BolC2t06957H Brassica oleracea HOM05D005230 ORTHO05D006506 9.2e-198 693.7 452 89.8
AL6G30990 Arabidopsis lyrata HOM05D005230 ORTHO05D006506 3.4e-192 675.2 384 90.6
Aa31LG1G8850 Aethionema arabicum HOM05D005230 ORTHO05D006506 5.1e-188 661.4 386 87.0
AT5G19485 Arabidopsis thaliana HOM05D005230 ORTHO05D006506 2.1e-186 656.0 457 89.9
Carub.0006s1783 Capsella rubella HOM05D005230 ORTHO05D006506 6.2e-186 654.4 457 88.2
THA.LOC104811208 Tarenaya hassleriana HOM05D005230 ORTHO05D006506 3.5e-181 638.6 386 86.3
Eucgr.B03758 Eucalyptus grandis HOM05D005230 ORTHO05D006506 4.1e-161 572.0 387 74.9
Prupe.4G269500 Prunus persica HOM05D005230 ORTHO05D006506 6.9e-161 571.2 387 76.0
Atru.chr3.2845 Acer truncatum HOM05D005230 ORTHO05D006506 1.5e-160 570.1 389 74.6
MD03G1163000 Malus domestica HOM05D005230 ORTHO05D006506 4.5e-160 568.5 386 75.1
Cpa.g.sc34.203 Carica papaya HOM05D005230 ORTHO05D006506 7.6e-160 567.8 386 75.4
CSS0009799 Camellia sinensis var. sinensis HOM05D005230 ORTHO05D006506 3.8e-159 565.5 387 74.4
CSS0035138 Camellia sinensis var. sinensis HOM05D005230 ORTHO05D006506 3.8e-159 565.5 387 74.4
CiPaw.13G147000 Carya illinoinensis HOM05D005230 ORTHO05D006506 8.5e-159 564.3 385 74.3
CANSAT54G1170 Cannabis sativa HOM05D005230 ORTHO05D006506 1.9e-158 563.1 386 75.4
QL01p016185 Quercus lobata HOM05D005230 ORTHO05D006506 1.6e-157 560.1 385 74.8
arahy.Tifrunner.gnm1.ann1.554KFZ Arachis hypogaea HOM05D005230 ORTHO05D006506 1.3e-156 557.0 386 73.8
arahy.Tifrunner.gnm1.ann1.YWPQ0A Arachis hypogaea HOM05D005230 ORTHO05D006506 1.3e-156 557.0 386 73.8
TWI75G0256 Tripterygium wilfordii HOM05D005230 ORTHO05D006506 1.8e-156 556.6 387 73.1
Actinidia06848 Actinidia chinensis HOM05D005230 ORTHO05D006506 2.3e-156 556.2 387 72.9
Manes.05G199900 Manihot esculenta HOM05D005230 ORTHO05D006506 5.1e-156 555.1 387 72.6
Ciclev10015197m.g Citrus clementina HOM05D005230 ORTHO05D006506 1.9e-155 553.1 390 72.3
Sabra16G0167000 Salix brachista HOM05D005230 ORTHO05D006506 9.7e-155 550.8 386 72.3
Actinidia16258 Actinidia chinensis HOM05D005230 ORTHO05D006506 1.3e-154 550.4 387 72.1
GSVIVG01020254001 Vitis vinifera HOM05D005230 ORTHO05D006506 1.7e-154 550.1 387 73.1
Haze_23300 Corylus avellana HOM05D005230 ORTHO05D006506 3.7e-154 548.9 385 73.5
Haze_23295 Corylus avellana HOM05D005230 ORTHO05D006506 4.8e-154 548.5 386 73.3
Potri.009G066400 Populus trichocarpa HOM05D005230 ORTHO05D006506 6.3e-154 548.1 386 71.8
Dinv29329 Davidia involucrata HOM05D005230 ORTHO05D006506 1.1e-153 547.4 387 72.4
ECA238G4724 Erigeron canadensis HOM05D005230 ORTHO05D006506 1.1e-153 547.4 387 72.4
Sopen11g029740 Solanum pennellii HOM05D005230 ORTHO05D006506 1.1e-153 547.4 387 71.3
Rhsim13G0231000 Rhododendron simsii HOM05D005230 ORTHO05D006506 1.8e-153 546.6 387 71.6
Manes.01G177100 Manihot esculenta HOM05D005230 ORTHO05D006506 4.1e-153 545.4 388 71.9
Solyc11g072090.2 Solanum lycopersicum HOM05D005230 ORTHO05D006506 4.1e-153 545.4 387 71.1
PGSC0003DMG400027416 Solanum tuberosum HOM05D005230 ORTHO05D006506 5.3e-153 545.0 387 71.3
Nn7g36961 Nelumbo nucifera HOM05D005230 ORTHO05D006506 6.9e-153 544.7 390 71.5
Potri.001G271800 Populus trichocarpa HOM05D005230 ORTHO05D006506 6.9e-153 544.7 386 71.8
CAN.G280.6 Capsicum annuum HOM05D005230 ORTHO05D006506 1.5e-152 543.5 387 71.1
TWI31G0483 Tripterygium wilfordii HOM05D005230 ORTHO05D006506 1.5e-152 543.5 387 71.3
Lj4g0004497 Lotus japonicus HOM05D005230 ORTHO05D006506 2.0e-152 543.1 389 71.7
Sabra09G0049500 Salix brachista HOM05D005230 ORTHO05D006506 3.4e-152 542.3 386 71.0
Aqoxy1G00076 Aquilegia oxysepala HOM05D005230 ORTHO05D006506 5.9e-152 541.6 389 70.2
VMungo0251G0349 Vigna mungo HOM05D005230 ORTHO05D006506 2.2e-151 539.7 387 71.8
Cc01_g07300 Coffea canephora HOM05D005230 ORTHO05D006506 2.9e-151 539.3 387 71.1
Lsat_1_v5_gn_2_32160 Lactuca sativa HOM05D005230 ORTHO05D006506 2.9e-151 539.3 387 71.1
Oeu025950.1 Olea europaea HOM05D005230 ORTHO05D006506 2.9e-151 539.3 387 69.8
HanXRQChr13g0402151 Helianthus annuus HOM05D005230 ORTHO05D006506 1.9e-150 536.6 387 70.5
TPR.G24369 Trifolium pratense HOM05D005230 ORTHO05D006506 1.9e-150 536.6 387 70.8
Phvul.002G235800 Phaseolus vulgaris HOM05D005230 ORTHO05D006506 5.5e-150 535.0 387 71.1
Ca_17953_v3 Cicer arietinum L. HOM05D005230 ORTHO05D006506 7.2e-150 534.6 387 71.3
Lalb_Chr07g0186541 Lupinus albus HOM05D005230 ORTHO05D006506 7.2e-150 534.6 387 71.1
AUR62006575 Chenopodium quinoa HOM05D005230 ORTHO05D006506 4.7e-149 531.9 392 70.4
AUR62000229 Chenopodium quinoa HOM05D005230 ORTHO05D006506 6.1e-149 531.6 392 70.2
Thecc.09G252100 Theobroma cacao HOM05D005230 ORTHO05D006506 6.1e-149 531.6 387 70.8
ClCG03G014290 Citrullus lanatus HOM05D005230 ORTHO05D006506 1.8e-148 530.0 387 71.1
Psat7g073480 Pisum sativum HOM05D005230 ORTHO05D006506 1.8e-148 530.0 387 70.5
COL.COLO4_33253 Corchorus olitorius HOM05D005230 ORTHO05D006506 2.3e-148 529.6 387 70.8
Cfa009930 Carpinus fangiana HOM05D005230 ORTHO05D006506 3.0e-148 529.3 364 74.2
RcHm_v2.0_Chr2g0123421 Rosa chinensis HOM05D005230 ORTHO05D006506 5.1e-148 528.5 387 70.8
Duzib168G0825 Durio zibethinus HOM05D005230 ORTHO05D006506 6.7e-148 528.1 386 69.9
CsaV3_1G041930 Cucumis sativus L. HOM05D005230 ORTHO05D006506 1.1e-147 527.3 387 70.5
MELO3C015608.2 Cucumis melo HOM05D005230 ORTHO05D006506 2.0e-147 526.6 387 70.5
Glyma.08G113500 Glycine max HOM05D005230 ORTHO05D006506 2.0e-147 526.6 387 70.0
DCAR_031608 Daucus carota HOM05D005230 ORTHO05D006506 2.6e-147 526.2 387 68.7
MSTRG.21320 Avicennia marina HOM05D005230 ORTHO05D006506 3.3e-147 525.8 387 69.3
FAN23G0348 Fragaria x ananassa HOM05D005230 ORTHO05D006506 1.3e-146 523.9 387 69.8
Peaxi162Scf00978g00317 Petunia axillaris HOM05D005230 ORTHO05D006506 1.3e-146 523.9 387 69.5
Hund07409 Selenicereus undatus HOM05D005230 ORTHO05D006506 1.3e-146 523.9 392 69.4
FvH4_1g25390 Fragaria vesca HOM05D005230 ORTHO05D006506 2.2e-146 523.1 387 69.8
Glyma.05G155700 Glycine max HOM05D005230 ORTHO05D006506 6.3e-146 521.5 387 69.5
SalBow6G0054 Salvia bowleyana HOM05D005230 ORTHO05D006506 8.2e-146 521.2 408 65.2
Medtr8g085640 Medicago truncatula HOM05D005230 ORTHO05D006506 1.8e-145 520.0 387 69.5
Sed0024170 Sechium edule HOM05D005230 ORTHO05D006506 1.8e-145 520.0 387 70.0
Duzib150G1312 Durio zibethinus HOM05D005230 ORTHO05D006506 2.4e-145 519.6 387 69.5
FAN28G1729 Fragaria x ananassa HOM05D005230 ORTHO05D006506 3.1e-145 519.2 387 69.0
SGA_v2.0_scaffold29G12151 Striga asiatica HOM05D005230 ORTHO05D006506 4.1e-145 518.8 387 66.9
Migut.D00707 Erythranthe guttata HOM05D005230 ORTHO05D006506 6.9e-145 518.1 401 67.3
PSO339G0973 Papaver somniferum HOM05D005230 ORTHO05D006506 1.5e-144 516.9 387 68.7
PSO384G0943 Papaver somniferum HOM05D005230 ORTHO05D006506 5.9e-144 515.0 387 68.5
Lj2C810G6 Lonicera japonica HOM05D005230 ORTHO05D006506 2.9e-143 512.7 366 71.9
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 1.2e-141 507.3 386 68.4
Oeu032061.2 Olea europaea HOM05D005230 ORTHO05D006506 1.6e-141 506.9 418 63.6
ATR0307G025 Amborella trichopoda HOM05D005230 ORTHO05D006506 8.8e-140 501.1 385 64.9
EL10Ac4g10073 Beta vulgaris HOM05D005230 ORTHO05D006506 2.6e-136 489.6 391 65.7
CDE08G0498 Ceratophyllum demersum HOM05D005230 ORTHO05D006506 2.2e-135 486.5 389 66.3
Gohir.D09G105900 Gossypium hirsutum HOM05D005230 ORTHO05D006506 1.9e-134 483.4 387 65.6
Gorai.006G123300 Gossypium raimondii HOM05D005230 ORTHO05D006506 1.9e-134 483.4 387 65.6
Gorai.004G013700 Gossypium raimondii HOM05D005230 ORTHO05D006506 2.5e-134 483.0 387 65.9
Nitab4.5_0002161g0080 Nicotiana tabacum HOM05D005230 ORTHO05D006506 2.5e-134 483.0 387 65.4
Gohir.D08G019200 Gossypium hirsutum HOM05D005230 ORTHO05D006506 2.7e-133 479.6 387 65.4
FAN26G2809 Fragaria x ananassa HOM05D005230 ORTHO05D006506 3.0e-132 476.1 476 56.9
Gohir.A08G009200 Gossypium hirsutum HOM05D005230 ORTHO05D006506 4.0e-132 475.7 387 65.1
Gohir.A09G109300 Gossypium hirsutum HOM05D005230 ORTHO05D006506 2.8e-130 469.5 387 64.1
MBI13_g00890_MAGBIO Magnolia biondii HOM05D005230 ORTHO05D006506 2.8e-130 469.5 388 64.7
Ah.06g194900 Amaranthus hybridus HOM05D005230 ORTHO05D006506 2.9e-127 459.5 388 63.4
HPP92_016891 Vanilla planifolia HOM05D005230 ORTHO05D006506 7.2e-126 454.9 382 62.6
SEGI_36393 Sequoiadendron giganteum HOM05D005230 ORTHO05D006506 2.1e-125 453.4 392 60.7
Os06g0338900 Oryza sativa ssp. japonica HOM05D005230 ORTHO05D006506 5.2e-124 448.7 385 60.5
PGR102G1412 Punica granatum HOM05D005230 ORTHO05D006506 2.8e-117 426.4 382 60.7
GSVIVG01002283001 Vitis vinifera HOM05D005230 ORTHO05D006506 4.4e-115 419.1 326 66.6
C09p56810 Brassica napus HOM05D005230 ORTHO05D006506 7.0e-113 411.8 234 87.6
Nitab4.5_0002567g0160 Nicotiana tabacum HOM05D005230 ORTHO05D006506 7.0e-113 411.8 387 57.9
vmacro04223 Vaccinium macrocarpon HOM05D005230 ORTHO05D006506 1.2e-112 411.0 423 54.1
unitig_0.g309 Utricularia gibba HOM05D005230 ORTHO05D006506 3.8e-111 406.0 386 56.2
Sc16g0010870 Simmondsia chinensis HOM05D005230 ORTHO05D006506 1.5e-110 404.1 310 66.5
Zm00001eb051600 Zea mays HOM05D005230 ORTHO05D006506 3.4e-107 392.9 366 57.7
Pp3c16_600 Physcomitrium patens HOM05D005230 ORTHO05D006506 5.4e-105 385.6 382 52.4
Mapoly0070s0045 Marchantia polymorpha HOM05D005230 ORTHO05D006506 2.7e-104 383.3 390 51.8
TAR628G1140 Trochodendron aralioides HOM05D005230 ORTHO05D006506 4.7e-93 345.9 296 60.8
SMO117G0151 Selaginella moellendorffii HOM05D005230 ORTHO05D006506 3.2e-89 333.2 383 43.9
Dinv24610 Davidia involucrata HOM05D005230 ORTHO05D006506 3.3e-78 296.6 325 52.0
BolC9t58535H Brassica oleracea HOM05D005230 ORTHO05D006506 1.2e-72 278.1 189 82.5
CBR_g54067 Chara braunii HOM05D005230 ORTHO05D006506 2.9e-66 256.9 383 40.5
Mapoly0050s0011 Marchantia polymorpha HOM05D005230 ORTHO05D006506 1.3e-58 231.5 319 41.4
Mapoly0050s0012 Marchantia polymorpha HOM05D005230 ORTHO05D006506 1.3e-58 231.5 242 51.7
Duzib150G0729 Durio zibethinus HOM05D005230 ORTHO05D006506 2.0e-43 181.0 163 62.0
MCO03G336 Micromonas commoda HOM05D005230 ORTHO05D006506 7.2e-41 172.6 393 30.3
Cre03.g207825 Chlamydomonas reinhardtii HOM05D005230 ORTHO05D006506 1.2e-40 171.8 434 32.0
Gohir.A05G264150 Gossypium hirsutum HOM05D005230 ORTHO05D006506 2.1e-40 171.0 123 69.1
CSS0018745 Camellia sinensis var. sinensis HOM05D005230 ORTHO05D006506 3.1e-36 157.1 158 54.4
VMungo0720G0475 Vigna mungo HOM05D005230 ORTHO05D051605 4.7e-32 143.3 268 40.7
PRCOL_00006600 Prasinoderma coloniale HOM05D005230 ORTHO05D006506 6.1e-32 142.9 434 27.6
FvH4_4g06340 Fragaria vesca HOM05D005230 ORTHO05D006506 7.9e-32 142.5 121 63.6
BcaC04g24210 Brassica carinata HOM05D005230 ORTHO05D006506 4.2e-25 120.2 68 94.1
Mapoly0070s0046 Marchantia polymorpha HOM05D005230 ORTHO05D006506 3.9e-23 113.6 82 57.3
VMungo0251G1518 Vigna mungo HOM05D005230 ORTHO05D051605 1.2e-19 102.1 220 34.5
Nn7g36957 Nelumbo nucifera HOM05D005230 ORTHO05D006506 2.5e-17 94.4 55 87.3
Psat2g003760 Pisum sativum HOM05D005230 ORTHO05D006506 1.2e-16 92.0 93 53.8
VMungo1309G2461 Vigna mungo HOM05D002467 ORTHO05D013374 2.3e-15 87.8 84 54.8
Sed0001059 Sechium edule HOM05D005230 ORTHO05D006506 4.0e-15 87.0 59 76.3
VMungo1383G0996 Vigna mungo HOM05D002467 ORTHO05D013374 2.7e-11 74.3 49 71.4
Dinv24611 Davidia involucrata HOM05D005230 ORTHO05D006506 1.7e-10 71.6 49 83.7
TAR623G0477 Trochodendron aralioides HOM05D005230 ORTHO05D006506 2.1e-08 64.7 97 45.4
Psat0s3158g0040 Pisum sativum HOM05D005230 ORTHO05D320643 1.8e-07 61.6 60 53.3
Psat4g142680 Pisum sativum HOM05D000493 ORTHO05D001638 1.8e-07 61.6 61 54.1
Peaxi162Scf00225g00424 Petunia axillaris HOM05D004145 ORTHO05D004879 6.8e-07 59.7 318 23.6
RcHm_v2.0_Chr4g0430791 Rosa chinensis HOM05D004145 ORTHO05D004879 6.8e-07 59.7 299 25.8
Cre12.g502200 Chlamydomonas reinhardtii HOM05D004145 ORTHO05D004879 8.8e-07 59.3 403 23.6
Nitab4.5_0010351g0020 Nicotiana tabacum HOM05D004145 ORTHO05D004879 8.8e-07 59.3 319 24.5
Psat0s472g0120 Pisum sativum HOM05D005230 ORTHO05D023087 8.8e-07 59.3 62 51.6
Solyc01g098180.3 Solanum lycopersicum HOM05D004145 ORTHO05D004879 1.5e-06 58.5 319 24.5
Sopen01g041760 Solanum pennellii HOM05D004145 ORTHO05D004879 1.5e-06 58.5 319 24.5
Psat4g142760 Pisum sativum HOM05D000493 ORTHO05D004446 2.6e-06 57.8 67 46.3
Nitab4.5_0000245g0100 Nicotiana tabacum HOM05D004145 ORTHO05D004879 5.7e-06 56.6 319 24.1
MCO16G505 Micromonas commoda HOM05D004145 ORTHO05D004879 9.8e-06 55.8 301 23.9


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