Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 4.7e-238 827.4 403 100.0
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 6.4e-219 763.8 403 92.6
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 1.9e-218 762.3 403 92.3
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 2.4e-218 761.9 403 92.1
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 2.4e-218 761.9 403 92.1
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 2.7e-217 758.4 405 92.3
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 2.1e-209 732.3 405 89.9
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 7.6e-204 713.8 405 88.1
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 1.0e-192 676.8 366 91.3
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 4.1e-189 664.8 366 89.9
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 2.0e-188 662.5 368 88.3
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 1.9e-146 523.1 354 73.7
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 4.1e-125 452.2 240 92.1
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 2.4e-109 399.8 404 51.5
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 9.3e-109 397.9 401 52.4
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 3.5e-108 396.0 400 53.0
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 8.7e-107 391.3 400 52.5
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 1.3e-99 367.5 397 50.1
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 1.8e-99 367.1 397 50.9
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 3.0e-99 366.3 398 49.0
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 3.9e-99 365.9 397 50.6
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 9.6e-98 361.3 402 47.5
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 3.7e-97 359.4 399 49.4
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 6.2e-97 358.6 399 47.6
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 1.4e-96 357.5 404 48.8
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 5.3e-96 355.5 401 48.6
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 2.0e-95 353.6 403 46.4
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 3.2e-93 346.3 372 49.7
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 9.3e-93 344.7 406 44.8
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 1.2e-92 344.4 400 45.5
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.2e-92 344.4 399 45.4
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 2.1e-92 343.6 408 46.6
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 3.5e-92 342.8 392 47.2
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 7.9e-92 341.7 396 46.2
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 7.9e-92 341.7 403 46.4
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 7.9e-92 341.7 390 47.2
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 1.8e-91 340.5 397 47.6
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 3.0e-91 339.7 402 46.8
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 6.7e-91 338.6 395 46.8
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 1.9e-90 337.0 394 45.7
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 4.3e-90 335.9 407 44.5
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 5.7e-90 335.5 406 44.3
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 1.6e-89 334.0 403 45.4
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 6.3e-89 332.0 394 44.9
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 5.3e-88 328.9 398 44.0
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 5.3e-88 328.9 394 44.4
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 1.2e-87 327.8 414 43.7
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 2.0e-87 327.0 401 43.4
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 3.4e-87 326.2 396 44.9
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 5.9e-87 325.5 402 43.0
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 1.0e-86 324.7 408 44.1
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 1.0e-86 324.7 399 44.1
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 1.8e-83 313.9 400 43.5
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 2.3e-83 313.5 393 42.7
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 6.7e-83 312.0 400 43.2
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 9.7e-82 308.1 400 41.5
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 2.8e-81 306.6 391 43.7
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.1e-77 294.7 362 43.9
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 1.4e-77 294.3 400 42.2
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 2.5e-77 293.5 150 94.0
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 4.4e-74 282.7 327 46.8
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 5.3e-72 275.8 327 46.2
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 2.8e-65 253.4 336 43.8
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 4.8e-65 252.7 329 41.9
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.4e-64 251.1 327 44.3
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 4.1e-64 249.6 298 44.6
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 6.7e-59 232.3 396 36.6
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 1.5e-58 231.1 405 34.8
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 1.2e-55 221.5 310 41.0
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 2.0e-55 220.7 383 34.2
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 4.2e-53 213.0 388 36.3
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 1.4e-35 154.8 205 39.5


User provided reference genes

Program Settings