Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 1.0e-216 756.5 395 100.0
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 4.7e-166 588.2 398 80.9
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 2.1e-161 572.8 398 80.2
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 3.0e-160 568.9 401 79.8
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 2.5e-159 565.8 401 75.8
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 1.4e-154 550.1 403 76.9
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 5.1e-152 541.6 396 77.3
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 1.1e-151 540.4 377 79.0
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 2.5e-151 539.3 396 76.5
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 4.3e-151 538.5 377 78.8
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 1.3e-150 537.0 396 76.5
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 1.4e-146 523.5 397 76.1
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 1.8e-141 506.5 362 75.1
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 3.8e-131 472.2 395 66.1
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 1.1e-98 364.4 382 55.0
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 6.1e-97 358.6 391 54.7
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 1.0e-96 357.8 379 54.6
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 1.5e-95 354.0 376 55.6
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 9.8e-95 351.3 384 53.1
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 1.7e-94 350.5 395 53.4
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.1e-93 347.8 384 52.9
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 2.7e-92 343.2 378 54.8
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 1.7e-91 340.5 378 54.2
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 2.9e-91 339.7 249 75.5
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 2.9e-91 339.7 377 52.5
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 3.8e-91 339.3 384 53.1
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 5.0e-91 339.0 396 49.5
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 1.9e-90 337.0 374 51.6
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 2.1e-89 333.6 391 52.9
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 4.7e-89 332.4 397 51.1
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 3.0e-88 329.7 383 51.7
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 4.0e-88 329.3 373 52.0
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 5.2e-88 328.9 402 49.3
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 8.9e-88 328.2 379 51.2
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 8.9e-88 328.2 395 51.6
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 1.2e-87 327.8 385 50.4
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 2.0e-87 327.0 374 52.4
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 2.6e-87 326.6 373 50.7
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 3.4e-87 326.2 379 51.5
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 3.4e-87 326.2 383 49.3
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 1.7e-86 323.9 376 50.5
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 1.7e-86 323.9 392 49.2
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 3.7e-86 322.8 384 51.8
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 4.9e-86 322.4 382 51.8
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 1.8e-85 320.5 376 50.5
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 3.1e-85 319.7 397 48.6
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 3.1e-85 319.7 381 49.3
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 4.5e-84 315.8 413 47.7
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 7.8e-84 315.1 377 50.9
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 7.8e-84 315.1 377 49.9
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 3.8e-83 312.8 379 48.8
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 3.3e-82 309.7 378 50.0
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 3.3e-82 309.7 381 49.9
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 7.3e-82 308.5 380 50.0
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 2.8e-81 306.6 389 47.8
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 3.6e-81 306.2 383 49.6
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 3.6e-81 306.2 383 50.1
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 1.0e-80 304.7 382 47.6
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 1.4e-80 304.3 383 49.3
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 1.2e-79 301.2 374 48.7
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 2.6e-79 300.1 379 48.3
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 3.4e-79 299.7 380 49.2
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 5.8e-79 298.9 380 48.7
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 9.8e-79 298.1 392 49.0
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 1.3e-78 297.7 231 71.4
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 1.4e-77 294.3 414 46.6
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 2.4e-77 293.5 430 45.3
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 6.6e-75 285.4 464 41.4
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 8.6e-75 285.0 291 56.7
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 5.6e-74 282.3 345 50.4
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 1.8e-72 277.3 385 47.8
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 1.8e-72 277.3 372 46.2
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 2.6e-71 273.5 376 47.9
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 1.7e-70 270.8 229 60.3
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 1.9e-69 267.3 275 52.7
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 6.2e-65 252.3 275 51.3
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 3.1e-64 250.0 387 41.6
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 2.0e-63 247.3 378 44.2
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 7.5e-63 245.4 242 55.4
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 1.7e-62 244.2 268 50.4
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 1.9e-61 240.7 230 58.7
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 9.2e-61 238.4 267 50.9
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 6.6e-59 232.3 382 42.1
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 1.9e-58 230.7 234 52.6
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 2.5e-58 230.3 224 52.2
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 3.1e-56 223.4 475 37.7
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 5.2e-56 222.6 375 39.5
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 8.9e-56 221.9 384 40.4
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 1.2e-55 221.5 299 45.2
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 1.2e-55 221.5 300 47.0
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 5.8e-55 219.2 345 42.3
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 3.2e-53 213.4 246 50.0
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 4.2e-53 213.0 263 49.0
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 1.6e-52 211.1 208 63.0
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 6.0e-52 209.1 283 43.8
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 5.1e-51 206.1 383 38.9
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 1.5e-50 204.5 312 43.3
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 1.9e-50 204.1 147 67.3
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 4.7e-49 199.5 213 58.2
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 1.3e-46 191.4 284 44.4
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 3.2e-45 186.8 152 70.4
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 3.2e-45 186.8 152 70.4
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 3.5e-44 183.3 233 47.2
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 4.6e-44 183.0 264 43.2
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 1.7e-43 181.0 300 42.0
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 6.6e-43 179.1 225 44.4
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 1.1e-42 178.3 398 35.2
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 2.5e-42 177.2 235 48.9
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 3.4e-39 166.8 399 36.3
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 6.0e-36 156.0 394 33.5
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 2.3e-35 154.1 338 33.4
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 5.1e-35 152.9 137 59.9
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 3.3e-34 150.2 299 40.1
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 6.7e-27 125.9 224 40.6
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 4.8e-25 119.8 234 38.9
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 2.3e-19 100.9 100 53.0
C09p54560 Brassica napus HOM05D000021 ORTHO05D000010 5.1e-19 99.8 69 75.4
BolC9t58324H Brassica oleracea HOM05D000021 ORTHO05D000010 5.1e-19 99.8 69 75.4
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 5.1e-19 99.8 73 72.6
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 6.7e-19 99.4 65 72.3
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 5.7e-18 96.3 76 72.4
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 9.7e-18 95.5 93 59.1
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 6.9e-16 89.4 289 27.7
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 1.9e-13 81.3 63 65.1
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 3.2e-13 80.5 92 50.0
BcaC04g19543 Brassica carinata HOM05D006712 ORTHO05D008219 2.7e-12 77.4 40 97.5
Cre08.g362850 Chlamydomonas reinhardtii HOM05D006712 ORTHO05D008219 6.5e-06 56.2 147 26.5


User provided reference genes

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