Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g22160 Schrenkiella parvula HOM05D004609 ORTHO05D005537 1.4e-159 566.2 282 100.0
BraA10t43855Z Brassica rapa HOM05D004609 ORTHO05D005537 1.9e-145 519.2 281 92.2
AL8G37180 Arabidopsis lyrata HOM05D004609 ORTHO05D005537 5.6e-145 517.7 273 93.0
BcaB08g36354 Brassica carinata HOM05D004609 ORTHO05D005537 2.1e-144 515.8 284 91.2
CARHR274250 Cardamine hirsuta HOM05D004609 ORTHO05D005537 1.1e-143 513.5 279 91.4
A10p17780 Brassica napus HOM05D004609 ORTHO05D005537 5.3e-143 511.1 280 91.4
Carub.0008s2127 Capsella rubella HOM05D004609 ORTHO05D005537 4.5e-142 508.1 275 91.6
C09p53290 Brassica napus HOM05D004609 ORTHO05D005537 2.2e-141 505.8 280 90.7
BolC9t58203H Brassica oleracea HOM05D004609 ORTHO05D005537 6.4e-141 504.2 280 90.4
Thhalv10014329m.g Eutrema salsugineum HOM05D004609 ORTHO05D005537 5.1e-138 494.6 282 87.9
BcaC04g19719 Brassica carinata HOM05D004298 ORTHO05D006236 2.9e-133 478.8 262 91.2
THA.LOC104799500 Tarenaya hassleriana HOM05D004609 ORTHO05D005537 4.3e-121 438.3 277 75.8
AL4G25930 Arabidopsis lyrata HOM05D004609 ORTHO05D005537 2.6e-110 402.5 278 75.9
BcaB01g04662 Brassica carinata HOM05D004609 ORTHO05D005537 2.2e-109 399.4 233 85.0
Cpa.g.sc216.14 Carica papaya HOM05D004609 ORTHO05D005537 4.1e-103 378.6 277 69.0
TWI79G0533 Tripterygium wilfordii HOM05D004609 ORTHO05D005537 2.0e-102 376.3 277 66.8
Lj1A191G19 Lonicera japonica HOM05D004609 ORTHO05D005537 1.7e-101 373.2 252 71.4
Dinv32753 Davidia involucrata HOM05D004609 ORTHO05D005537 2.5e-100 369.4 260 68.8
Atru.chr3.3636 Acer truncatum HOM05D004609 ORTHO05D005537 3.2e-100 369.0 265 69.1
MD11G1134900 Malus domestica HOM05D004609 ORTHO05D005537 4.2e-100 368.6 292 64.0
Haze_10438 Corylus avellana HOM05D004609 ORTHO05D005537 5.5e-100 368.2 265 69.1
Manes.11G144600 Manihot esculenta HOM05D004609 ORTHO05D005537 2.1e-99 366.3 277 65.0
Eucgr.B02494 Eucalyptus grandis HOM05D004609 ORTHO05D005537 1.0e-98 364.0 282 66.3
CiPaw.13G112500 Carya illinoinensis HOM05D004609 ORTHO05D005537 1.8e-98 363.2 269 66.5
Dinv32752 Davidia involucrata HOM05D004609 ORTHO05D005537 1.8e-98 363.2 252 68.7
QL01p022329 Quercus lobata HOM05D004609 ORTHO05D005537 8.8e-98 360.9 240 72.1
TPR.G15569 Trifolium pratense HOM05D004609 ORTHO05D005537 3.3e-97 359.0 252 69.0
Cfa011322 Carpinus fangiana HOM05D004609 ORTHO05D005537 5.7e-97 358.2 228 76.3
Migut.D02219 Erythranthe guttata HOM05D004609 ORTHO05D005537 9.7e-97 357.5 268 67.2
Gohir.D13G235900 Gossypium hirsutum HOM05D004609 ORTHO05D005537 1.7e-96 356.7 277 65.0
PSO339G4039 Papaver somniferum HOM05D004609 ORTHO05D005537 2.8e-96 355.9 281 65.5
AUR62001379 Chenopodium quinoa HOM05D004609 ORTHO05D005537 4.8e-96 355.1 280 63.6
PSO063G6287 Papaver somniferum HOM05D004609 ORTHO05D005537 4.8e-96 355.1 281 65.5
MD03G1117100 Malus domestica HOM05D004609 ORTHO05D005537 1.1e-95 354.0 279 63.1
Ca_05255_v3 Cicer arietinum L. HOM05D004609 ORTHO05D005537 1.4e-95 353.6 230 74.3
Gohir.A13G230400 Gossypium hirsutum HOM05D004609 ORTHO05D005537 1.8e-95 353.2 277 64.3
Prupe.6G100900 Prunus persica HOM05D004609 ORTHO05D005537 1.8e-95 353.2 228 73.7
RcHm_v2.0_Chr5g0059481 Rosa chinensis HOM05D004609 ORTHO05D005537 1.8e-95 353.2 230 73.0
GSVIVG01025180001 Vitis vinifera HOM05D004609 ORTHO05D005537 2.4e-95 352.8 277 64.6
COL.COLO4_18340 Corchorus olitorius HOM05D004609 ORTHO05D005537 4.1e-95 352.1 228 75.0
CSS0023307 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 7.0e-95 351.3 279 65.6
FAN11G0836 Fragaria x ananassa HOM05D004609 ORTHO05D005537 9.1e-95 350.9 242 70.7
TAR633G2157 Trochodendron aralioides HOM05D004609 ORTHO05D005537 9.1e-95 350.9 278 64.0
Aa31LG1G12570 Aethionema arabicum HOM05D004609 ORTHO05D005537 1.2e-94 350.5 223 75.8
CSS0022919 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 1.2e-94 350.5 279 65.6
FAN21G1816 Fragaria x ananassa HOM05D004609 ORTHO05D005537 1.2e-94 350.5 289 62.6
QL03p063529 Quercus lobata HOM05D004609 ORTHO05D005537 2.0e-94 349.7 228 74.6
QL03p063925 Quercus lobata HOM05D004609 ORTHO05D005537 2.0e-94 349.7 228 74.6
Lj3g0003868 Lotus japonicus HOM05D004609 ORTHO05D005537 4.5e-94 348.6 253 68.0
Nn2g13092 Nelumbo nucifera HOM05D004609 ORTHO05D005537 4.5e-94 348.6 251 67.7
Solyc11g069360.2 Solanum lycopersicum HOM05D004609 ORTHO05D005537 7.7e-94 347.8 270 65.6
PGSC0003DMG400008104 Solanum tuberosum HOM05D004609 ORTHO05D005537 1.0e-93 347.4 228 74.1
CAN.G631.22 Capsicum annuum HOM05D004609 ORTHO05D005537 2.9e-93 345.9 277 64.3
FAN16G0772 Fragaria x ananassa HOM05D004609 ORTHO05D005537 3.8e-93 345.5 242 69.4
arahy.Tifrunner.gnm1.ann1.M55FGE Arachis hypogaea HOM05D004609 ORTHO05D005537 5.0e-93 345.1 238 70.6
Sopen11g028080 Solanum pennellii HOM05D004609 ORTHO05D005537 5.0e-93 345.1 228 74.1
Actinidia07134 Actinidia chinensis HOM05D004609 ORTHO05D005537 8.5e-93 344.4 278 64.7
Thecc.09G339900 Theobroma cacao HOM05D004609 ORTHO05D005537 8.5e-93 344.4 225 74.7
FvH4_3g32470 Fragaria vesca HOM05D004609 ORTHO05D005537 1.5e-92 343.6 230 71.7
Ciclev10029204m.g Citrus clementina HOM05D004609 ORTHO05D005537 1.9e-92 343.2 228 72.8
PGR102G0162 Punica granatum HOM05D004609 ORTHO05D005537 1.9e-92 343.2 264 65.9
Glyma.11G147000 Glycine max HOM05D004609 ORTHO05D005537 2.5e-92 342.8 236 71.2
Sed0020077 Sechium edule HOM05D004609 ORTHO05D005537 2.5e-92 342.8 272 65.1
Sabra09G0016900 Salix brachista HOM05D004609 ORTHO05D005537 3.2e-92 342.4 280 62.1
TAR623G1761 Trochodendron aralioides HOM05D004609 ORTHO05D005537 7.2e-92 341.3 229 71.6
Hma1.2p1_1031F.1_g250010 Hydrangea macrophylla HOM05D004609 ORTHO05D005537 1.2e-91 340.5 233 71.7
Oeu002864.1 Olea europaea HOM05D004609 ORTHO05D005537 1.2e-91 340.5 230 72.2
Psat1g080680 Pisum sativum HOM05D004609 ORTHO05D005537 1.6e-91 340.1 223 73.1
Aqoxy3G03284 Aquilegia oxysepala HOM05D004609 ORTHO05D005537 2.7e-91 339.3 257 66.5
Duzib168G0882 Durio zibethinus HOM05D004609 ORTHO05D005537 2.7e-91 339.3 228 73.2
FAN25G2211 Fragaria x ananassa HOM05D004609 ORTHO05D005537 2.7e-91 339.3 242 67.8
HanXRQChr01g0016861 Helianthus annuus HOM05D004609 ORTHO05D005537 2.7e-91 339.3 229 70.7
PSO017G0942 Papaver somniferum HOM05D004609 ORTHO05D005537 2.7e-91 339.3 280 62.5
VMungo1127G1456 Vigna mungo HOM05D004609 ORTHO05D005537 2.7e-91 339.3 249 66.7
Potri.009G025500 Populus trichocarpa HOM05D004609 ORTHO05D005537 3.6e-91 339.0 225 72.4
Ah.15g094800 Amaranthus hybridus HOM05D004609 ORTHO05D005537 6.1e-91 338.2 277 63.5
MBI07_g19316_MAGBIO Magnolia biondii HOM05D004609 ORTHO05D005537 6.1e-91 338.2 227 73.1
Gorai.013G266600 Gossypium raimondii HOM05D004609 ORTHO05D005537 1.0e-90 337.4 228 71.9
Lsat_1_v5_gn_5_178620 Lactuca sativa HOM05D004609 ORTHO05D005537 1.0e-90 337.4 253 66.0
EL10Ac7g18241 Beta vulgaris HOM05D004609 ORTHO05D005537 1.4e-90 337.0 282 62.4
Lalb_Chr19g0137311 Lupinus albus HOM05D004609 ORTHO05D005537 1.8e-90 336.7 238 69.7
arahy.Tifrunner.gnm1.ann1.DB762C Arachis hypogaea HOM05D004609 ORTHO05D005537 2.3e-90 336.3 214 74.8
arahy.Tifrunner.gnm1.ann1.ZK6QPF Arachis hypogaea HOM05D004609 ORTHO05D005537 2.3e-90 336.3 214 74.8
Oeu059598.1 Olea europaea HOM05D004609 ORTHO05D005537 2.3e-90 336.3 230 71.3
Rhsim01G0217400 Rhododendron simsii HOM05D004609 ORTHO05D005537 4.0e-90 335.5 230 70.4
SalBow6G5279 Salvia bowleyana HOM05D004609 ORTHO05D005537 4.0e-90 335.5 237 70.9
Phvul.011G078800 Phaseolus vulgaris HOM05D004609 ORTHO05D005537 1.2e-89 334.0 221 72.9
Sc03g0007720 Simmondsia chinensis HOM05D004609 ORTHO05D005537 2.0e-89 333.2 211 75.4
Cc01_g11180 Coffea canephora HOM05D004609 ORTHO05D005537 2.6e-89 332.8 225 72.0
CsaV3_1G012730 Cucumis sativus L. HOM05D004609 ORTHO05D005537 2.6e-89 332.8 272 62.5
Medtr4g059530 Medicago truncatula HOM05D004609 ORTHO05D005537 5.7e-89 331.6 210 74.8
Medtr4g459430 Medicago truncatula HOM05D004609 ORTHO05D005537 5.7e-89 331.6 210 74.8
MSTRG.17807 Avicennia marina HOM05D004609 ORTHO05D005537 9.8e-89 330.9 245 68.2
Rhsim13G0094100 Rhododendron simsii HOM05D004609 ORTHO05D005537 2.2e-88 329.7 210 75.2
MELO3C026847.2 Cucumis melo HOM05D004609 ORTHO05D005537 3.7e-88 328.9 273 61.9
ECA248G0132 Erigeron canadensis HOM05D004609 ORTHO05D005537 4.8e-88 328.6 261 64.4
Hund10347 Selenicereus undatus HOM05D004609 ORTHO05D005537 4.8e-88 328.6 273 61.5
AUR62025599 Chenopodium quinoa HOM05D004609 ORTHO05D005537 6.3e-88 328.2 275 61.8
Lsat_1_v5_gn_1_65361 Lactuca sativa HOM05D004609 ORTHO05D005537 8.3e-88 327.8 274 61.7
PSO478G0080 Papaver somniferum HOM05D004609 ORTHO05D005537 4.1e-87 325.5 208 75.0
SalBow3G2420 Salvia bowleyana HOM05D004609 ORTHO05D005537 4.5e-86 322.0 262 64.1
Nitab4.5_0000650g0230 Nicotiana tabacum HOM05D004609 ORTHO05D005537 5.9e-86 321.6 242 67.8
Hund02313 Selenicereus undatus HOM05D004609 ORTHO05D005537 1.0e-85 320.9 277 61.0
CANSAT54G0849 Cannabis sativa HOM05D004609 ORTHO05D005537 5.0e-85 318.5 253 64.4
DCAR_006058 Daucus carota HOM05D004609 ORTHO05D005537 8.5e-85 317.8 211 71.6
CDE09G0954 Ceratophyllum demersum HOM05D004609 ORTHO05D005537 4.2e-84 315.5 232 65.5
ClCG03G002070 Citrullus lanatus HOM05D004609 ORTHO05D005537 1.2e-83 313.9 318 54.4
unitig_749.g13641 Utricularia gibba HOM05D004609 ORTHO05D005537 3.6e-83 312.4 235 66.8
AUR62009522 Chenopodium quinoa HOM05D004609 ORTHO05D005537 4.7e-83 312.0 250 64.0
SGA_v2.0_scaffold2G00896 Striga asiatica HOM05D004609 ORTHO05D005537 1.4e-82 310.5 210 72.4
ATR0115G025 Amborella trichopoda HOM05D004609 ORTHO05D005537 4.4e-81 305.4 210 70.0
AT5G60590 Arabidopsis thaliana HOM05D004609 ORTHO05D005537 4.1e-79 298.9 163 90.8
Zm00001eb007760 Zea mays HOM05D004609 ORTHO05D005537 7.0e-79 298.1 205 68.8
DCAR_013489 Daucus carota HOM05D004609 ORTHO05D005537 2.7e-78 296.2 213 68.1
SEGI_11191 Sequoiadendron giganteum HOM05D004609 ORTHO05D005537 5.9e-78 295.0 211 63.5
HPP92_018599 Vanilla planifolia HOM05D004609 ORTHO05D005537 8.6e-77 291.2 207 68.1
Nitab4.5_0005621g0180 Nicotiana tabacum HOM05D004609 ORTHO05D005537 6.1e-75 285.0 364 46.4
Peaxi162Scf00270g00828 Petunia axillaris HOM05D004609 ORTHO05D005537 8.0e-75 284.6 207 69.1
arahy.Tifrunner.gnm1.ann1.GT28YG Arachis hypogaea HOM05D004609 ORTHO05D005537 1.7e-69 266.9 210 63.8
Nitab4.5_0004205g0030 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.9e-68 263.5 221 62.4
SGA_v2.0_scaffold80G25763 Striga asiatica HOM05D004609 ORTHO05D005537 1.0e-66 257.7 172 72.7
Mapoly0053s0017 Marchantia polymorpha HOM05D004609 ORTHO05D005537 7.5e-65 251.5 218 55.5
Nitab4.5_0006639g0040 Nicotiana tabacum HOM05D004609 ORTHO05D005537 7.5e-65 251.5 168 72.0
vmacro03196 Vaccinium macrocarpon HOM05D004609 ORTHO05D005537 1.3e-64 250.8 190 68.9
Nitab4.5_0012973g0010 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.7e-64 250.4 169 70.4
AagrBONN_evm.TU.Sc2ySwM_368.1656 Anthoceros agrestis HOM05D004609 ORTHO05D005537 7.0e-63 245.0 205 56.6
Pp3c1_35360 Physcomitrium patens HOM05D004609 ORTHO05D005537 1.9e-60 236.9 210 54.8
SMO232G0060 Selaginella moellendorffii HOM05D004609 ORTHO05D005537 8.9e-58 228.0 189 58.7
Nitab4.5_0005621g0170 Nicotiana tabacum HOM05D004609 ORTHO05D005537 3.4e-57 226.1 212 55.2
CBR_g359 Chara braunii HOM05D004609 ORTHO05D005537 2.4e-55 219.9 216 53.7
CBR_g32631 Chara braunii HOM05D004609 ORTHO05D005537 2.1e-54 216.9 216 52.3
Nitab4.5_0006639g0020 Nicotiana tabacum HOM05D004609 ORTHO05D005537 4.6e-54 215.7 155 69.0
C03p12780 Brassica napus HOM05D004609 ORTHO05D005537 8.1e-51 204.9 277 49.1
SHI25734 Sapria himalayana HOM05D004609 ORTHO05D005537 1.4e-50 204.1 156 64.7
MCO01G111 Micromonas commoda HOM05D004609 ORTHO05D005537 1.8e-50 203.8 231 44.6
A03p11090 Brassica napus HOM05D004609 ORTHO05D005537 2.3e-50 203.4 108 90.7
BraA03t10423Z Brassica rapa HOM05D004609 ORTHO05D005537 2.3e-50 203.4 108 90.7
CSS0027878 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 2.6e-49 199.9 172 59.9
BolC3t13744H Brassica oleracea HOM05D004609 ORTHO05D005537 3.5e-46 189.5 279 47.3
Nitab4.5_0005621g0150 Nicotiana tabacum HOM05D004609 ORTHO05D005537 6.0e-46 188.7 117 72.6
Haze_26358 Corylus avellana HOM05D004609 ORTHO05D005537 4.2e-39 166.0 202 43.6
Nitab4.5_0006639g0060 Nicotiana tabacum HOM05D004609 ORTHO05D005537 4.3e-36 156.0 114 66.7
CSS0039805 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 2.8e-35 153.3 172 48.8
CAN.G604.3 Capsicum annuum HOM05D004609 ORTHO05D005537 1.8e-34 150.6 97 72.2
CAN.G1153.4 Capsicum annuum HOM05D004609 ORTHO05D005537 9.9e-33 144.8 109 60.6
PRCOL_00000940 Prasinoderma coloniale HOM05D004609 ORTHO05D005537 2.4e-31 140.2 192 42.7
Nitab4.5_0006639g0090 Nicotiana tabacum HOM05D004609 ORTHO05D005537 9.3e-31 138.3 116 59.5
Glyma.12G067902 Glycine max HOM05D004609 ORTHO05D005537 3.1e-26 123.2 121 57.9
AUR62013942 Chenopodium quinoa HOM05D004609 ORTHO05D005537 1.2e-25 121.3 91 64.8
Actinidia28417 Actinidia chinensis HOM05D004609 ORTHO05D005537 1.0e-13 81.6 61 70.5
Cre05.g234657 Chlamydomonas reinhardtii HOM05D004609 ORTHO05D005537 4.3e-12 76.3 202 31.7
AUR62017074 Chenopodium quinoa HOM05D004609 ORTHO05D005537 3.7e-11 73.2 115 39.1
MCO14G032 Micromonas commoda HOM05D006526 ORTHO05D008496 1.8e-10 70.9 205 28.3
CsaV3_3G027000 Cucumis sativus L. HOM05D006526 ORTHO05D008496 1.1e-07 61.6 213 25.4
MELO3C014888.2 Cucumis melo HOM05D006526 ORTHO05D008496 4.2e-07 59.7 213 24.9
Hma1.2p1_1278F.1_g272280 Hydrangea macrophylla HOM05D006526 ORTHO05D008496 7.2e-07 58.9 221 26.2
PRCOL_00005540 Prasinoderma coloniale HOM05D004609 ORTHO05D005537 7.2e-07 58.9 136 27.9
Lalb_Chr14g0363401 Lupinus albus HOM05D006526 ORTHO05D008496 1.2e-06 58.2 205 25.9
Ca_29294_v3 Cicer arietinum L. HOM05D004609 ORTHO05D005537 7.9e-06 55.5 130 27.7


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