Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g19130 Schrenkiella parvula HOM05D004327 ORTHO05D005032 5.1e-194 681.0 375 100.0
Carub.0008s1793 Capsella rubella HOM05D004327 ORTHO05D005032 9.7e-185 650.2 375 95.2
AL8G33390 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 2.8e-184 648.7 375 92.5
CARHR271210 Cardamine hirsuta HOM05D004327 ORTHO05D005032 2.4e-183 645.6 375 94.9
BolC3t13942H Brassica oleracea HOM05D004327 ORTHO05D005032 2.5e-180 635.6 363 97.0
BraA03t10592Z Brassica rapa HOM05D004327 ORTHO05D005032 4.2e-180 634.8 363 97.0
Thhalv10013843m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 1.6e-179 632.9 363 96.7
AT5G57410 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 9.7e-177 623.6 375 90.4
BcaB01g04457 Brassica carinata HOM05D004327 ORTHO05D005032 1.2e-174 616.7 353 96.9
BcaC01g06496 Brassica carinata HOM05D004327 ORTHO05D005032 1.5e-174 616.3 367 93.7
C03p15000 Brassica napus HOM05D004327 ORTHO05D005032 2.1e-171 605.9 344 97.7
A03p12840 Brassica napus HOM05D004327 ORTHO05D005032 3.6e-171 605.1 344 97.7
Aa31LG3G13300 Aethionema arabicum HOM05D004327 ORTHO05D005032 8.5e-165 583.9 417 80.6
THA.LOC104811786 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 6.3e-160 567.8 366 86.3
THA.LOC104813521 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 2.4e-159 565.8 411 80.3
VMungo1215G1888 Vigna mungo HOM05D004327 ORTHO05D005032 5.9e-158 561.2 376 80.9
Atru.chr7.613 Acer truncatum HOM05D004327 ORTHO05D005032 1.9e-156 556.2 379 80.7
Manes.14G154300 Manihot esculenta HOM05D004327 ORTHO05D005032 1.9e-156 556.2 377 81.2
Glyma.17G062900 Glycine max HOM05D004327 ORTHO05D005032 1.2e-155 553.5 376 79.8
Thecc.09G176900 Theobroma cacao HOM05D004327 ORTHO05D005032 1.2e-155 553.5 377 82.2
Phvul.003G145300 Phaseolus vulgaris HOM05D004327 ORTHO05D005032 6.1e-155 551.2 376 79.3
Cpa.g.sc233.7 Carica papaya HOM05D004327 ORTHO05D005032 2.3e-154 549.3 369 81.0
arahy.Tifrunner.gnm1.ann1.UF0NDT Arachis hypogaea HOM05D004327 ORTHO05D005032 3.0e-154 548.9 375 79.2
QL02p097831 Quercus lobata HOM05D004327 ORTHO05D005032 5.2e-154 548.1 374 82.6
arahy.Tifrunner.gnm1.ann1.IHC8NS Arachis hypogaea HOM05D004327 ORTHO05D005032 1.2e-153 547.0 375 78.9
Potri.018G092000 Populus trichocarpa HOM05D004327 ORTHO05D005032 1.5e-153 546.6 376 81.9
CiPaw.07G192500 Carya illinoinensis HOM05D004327 ORTHO05D005032 2.6e-153 545.8 377 78.8
Ciclev10008675m.g Citrus clementina HOM05D004327 ORTHO05D005032 2.6e-153 545.8 374 82.1
GSVIVG01029211001 Vitis vinifera HOM05D004327 ORTHO05D005032 5.7e-153 544.7 374 82.1
Glyma.13G096600 Glycine max HOM05D004327 ORTHO05D005032 2.2e-152 542.7 369 79.9
Gohir.D08G093800 Gossypium hirsutum HOM05D004327 ORTHO05D005032 2.8e-152 542.3 377 81.7
Gohir.A08G084200 Gossypium hirsutum HOM05D004327 ORTHO05D005032 8.3e-152 540.8 377 81.4
CSS0007595 Camellia sinensis var. sinensis HOM05D004327 ORTHO05D005032 2.4e-151 539.3 387 79.6
Dinv43382 Davidia involucrata HOM05D004327 ORTHO05D005032 3.1e-151 538.9 371 78.7
Dinv42719 Davidia involucrata HOM05D004327 ORTHO05D005032 9.1e-151 537.3 375 77.9
RcHm_v2.0_Chr4g0402371 Rosa chinensis HOM05D004327 ORTHO05D005032 2.7e-150 535.8 377 79.3
Lj4g0017259 Lotus japonicus HOM05D004327 ORTHO05D005032 4.5e-150 535.0 373 78.8
Medtr4g127970 Medicago truncatula HOM05D004327 ORTHO05D005032 4.5e-150 535.0 375 78.1
Duzib150G0132 Durio zibethinus HOM05D004327 ORTHO05D005032 1.3e-149 533.5 377 80.4
Lalb_Chr07g0180501 Lupinus albus HOM05D004327 ORTHO05D005032 1.7e-149 533.1 375 76.8
Gorai.004G099500 Gossypium raimondii HOM05D004327 ORTHO05D005032 2.2e-149 532.7 385 79.2
Prupe.1G085300 Prunus persica HOM05D004327 ORTHO05D005032 2.2e-149 532.7 386 76.2
Duzib168G0099 Durio zibethinus HOM05D004327 ORTHO05D005032 2.9e-149 532.3 379 79.7
COL.COLO4_37716 Corchorus olitorius HOM05D004327 ORTHO05D005032 1.5e-148 530.0 372 81.5
Ca_21229_v3 Cicer arietinum L. HOM05D004327 ORTHO05D005032 7.2e-148 527.7 359 82.5
TPR.G5449 Trifolium pratense HOM05D004327 ORTHO05D005032 1.6e-147 526.6 376 80.1
CANSAT11G1121 Cannabis sativa HOM05D004327 ORTHO05D005032 2.7e-147 525.8 386 74.9
Hma1.2p1_1025F.1_g249340 Hydrangea macrophylla HOM05D004327 ORTHO05D005032 4.7e-147 525.0 374 78.1
TAR343G0001 Trochodendron aralioides HOM05D004327 ORTHO05D005032 8.0e-147 524.2 387 75.5
CsaV3_2G008420 Cucumis sativus L. HOM05D004327 ORTHO05D005032 1.0e-146 523.9 376 75.3
MD16G1257500 Malus domestica HOM05D004327 ORTHO05D005032 1.4e-146 523.5 376 76.1
Eucgr.C00153 Eucalyptus grandis HOM05D004327 ORTHO05D005032 5.2e-146 521.5 367 78.5
MD13G1253000 Malus domestica HOM05D004327 ORTHO05D005032 6.8e-146 521.2 387 74.4
Cc06_g13210 Coffea canephora HOM05D004327 ORTHO05D005032 2.0e-145 519.6 365 80.3
ClCG11G012140 Citrullus lanatus HOM05D004327 ORTHO05D005032 4.8e-144 515.0 365 76.7
FAN22G1646 Fragaria x ananassa HOM05D004327 ORTHO05D005032 5.4e-143 511.5 387 76.0
Nn8g40460 Nelumbo nucifera HOM05D004327 ORTHO05D005032 5.4e-143 511.5 387 76.0
PSO063G6085 Papaver somniferum HOM05D004327 ORTHO05D005032 1.2e-142 510.4 368 77.2
MSTRG.26218 Avicennia marina HOM05D004327 ORTHO05D005032 1.6e-142 510.0 364 76.4
FvH4_4g08170 Fragaria vesca HOM05D004327 ORTHO05D005032 3.5e-142 508.8 387 75.7
Psat4g169000 Pisum sativum HOM05D004327 ORTHO05D005032 3.5e-142 508.8 352 78.7
vmacro06012 Vaccinium macrocarpon HOM05D004327 ORTHO05D005032 4.5e-142 508.4 354 76.8
Sed0007507 Sechium edule HOM05D004327 ORTHO05D005032 1.3e-141 506.9 386 72.3
Migut.K00240 Erythranthe guttata HOM05D004327 ORTHO05D005032 3.8e-141 505.4 365 75.3
MSTRG.6222 Avicennia marina HOM05D004327 ORTHO05D005032 6.6e-141 504.6 377 75.1
AL3G53050 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 3.3e-140 502.3 359 74.9
DCAR_017971 Daucus carota HOM05D004327 ORTHO05D005032 4.2e-140 501.9 344 78.8
Sc14g0001280 Simmondsia chinensis HOM05D004327 ORTHO05D005032 1.2e-139 500.4 351 80.6
THA.LOC104803493 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 1.6e-139 500.0 360 78.6
Sabra18G0079100 Salix brachista HOM05D004327 ORTHO05D005032 2.1e-139 499.6 374 77.5
HanXRQChr11g0322421 Helianthus annuus HOM05D004327 ORTHO05D005032 4.7e-139 498.4 386 74.9
Migut.J01485 Erythranthe guttata HOM05D004327 ORTHO05D005032 6.1e-139 498.0 344 78.2
PSO170G3199 Papaver somniferum HOM05D004327 ORTHO05D005032 8.0e-139 497.7 368 76.1
Rhsim03G0264600 Rhododendron simsii HOM05D004327 ORTHO05D005032 3.0e-138 495.7 366 77.0
ECA240G0157 Erigeron canadensis HOM05D004327 ORTHO05D005032 8.9e-138 494.2 360 76.1
Carub.0003s3311 Capsella rubella HOM05D004327 ORTHO05D005032 2.0e-137 493.0 376 73.9
CARHR109440 Cardamine hirsuta HOM05D004327 ORTHO05D005032 3.4e-137 492.3 375 71.5
Sp3g32340 Schrenkiella parvula HOM05D004327 ORTHO05D005032 6.3e-136 488.0 374 72.5
BcaB07g31641 Brassica carinata HOM05D004327 ORTHO05D005032 1.1e-135 487.3 374 73.8
Peaxi162Scf00231g00726 Petunia axillaris HOM05D004327 ORTHO05D005032 2.4e-135 486.1 372 75.5
BolC9t54328H Brassica oleracea HOM05D004327 ORTHO05D005032 3.1e-135 485.7 349 74.8
Solyc07g019530.3 Solanum lycopersicum HOM05D004327 ORTHO05D005032 5.4e-135 485.0 367 75.7
Sopen07g008040 Solanum pennellii HOM05D004327 ORTHO05D005032 5.4e-135 485.0 367 75.7
SGA_v2.0_scaffold66G22446 Striga asiatica HOM05D004327 ORTHO05D005032 1.6e-134 483.4 367 75.5
CDE04G3746 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 2.7e-134 482.6 367 74.4
BcaC04g22882 Brassica carinata HOM05D004327 ORTHO05D005032 1.0e-133 480.7 368 74.2
C09p14270 Brassica napus HOM05D004327 ORTHO05D005032 1.0e-133 480.7 368 74.2
CAN.G210.1 Capsicum annuum HOM05D004327 ORTHO05D005032 1.0e-133 480.7 354 76.8
PGR142G4100 Punica granatum HOM05D004327 ORTHO05D005032 1.7e-133 479.9 369 72.6
ECA236G3505 Erigeron canadensis HOM05D004327 ORTHO05D005032 2.3e-133 479.6 367 74.7
A09p12090 Brassica napus HOM05D004327 ORTHO05D005032 2.9e-133 479.2 349 76.5
EL10Ac8g18287 Beta vulgaris HOM05D004327 ORTHO05D005032 3.9e-133 478.8 369 74.0
Thhalv10022742m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 3.9e-133 478.8 374 70.3
BraA09t36853Z Brassica rapa HOM05D004327 ORTHO05D005032 6.6e-133 478.0 349 76.2
ATR0580G352 Amborella trichopoda HOM05D004327 ORTHO05D005032 2.5e-132 476.1 368 73.6
Aqoxy7G03046 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 4.3e-132 475.3 350 77.7
HPP92_019412 Vanilla planifolia HOM05D004327 ORTHO05D005032 4.3e-132 475.3 345 77.4
MBI14_g17374_MAGBIO Magnolia biondii HOM05D004327 ORTHO05D005032 1.6e-131 473.4 374 73.3
Hund09030 Selenicereus undatus HOM05D004327 ORTHO05D005032 2.8e-131 472.6 369 73.7
SalBow6G1961 Salvia bowleyana HOM05D004327 ORTHO05D005032 6.1e-131 471.5 367 73.3
Zm00001eb178290 Zea mays HOM05D004327 ORTHO05D005032 1.8e-130 469.9 372 73.4
Lsat_1_v5_gn_7_54620 Lactuca sativa HOM05D004327 ORTHO05D005032 5.2e-130 468.4 362 75.1
AUR62033220 Chenopodium quinoa HOM05D004327 ORTHO05D005032 2.2e-128 463.0 351 75.8
CDE07G0842 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 2.9e-128 462.6 350 74.6
Actinidia17317 Actinidia chinensis HOM05D004327 ORTHO05D005032 3.2e-127 459.1 384 72.1
Os08g0242900 Oryza sativa ssp. japonica HOM05D004327 ORTHO05D005032 3.2e-127 459.1 342 76.6
Aa31LG8G15970 Aethionema arabicum HOM05D004327 ORTHO05D005032 5.4e-127 458.4 372 71.8
Lalb_Chr13g0300201 Lupinus albus HOM05D004327 ORTHO05D005032 1.2e-126 457.2 355 72.4
SHI02909 Sapria himalayana HOM05D004327 ORTHO05D005032 3.0e-125 452.6 356 73.3
Dinv41244 Davidia involucrata HOM05D004327 ORTHO05D005032 3.1e-122 442.6 320 80.0
Sed0007415 Sechium edule HOM05D004327 ORTHO05D005032 5.2e-122 441.8 312 76.3
unitig_0.g2679 Utricularia gibba HOM05D004327 ORTHO05D005032 3.4e-121 439.1 352 72.7
CiPaw.08G036000 Carya illinoinensis HOM05D004327 ORTHO05D005032 4.1e-119 432.2 364 67.9
AUR62021302 Chenopodium quinoa HOM05D004327 ORTHO05D005032 1.6e-118 430.3 351 72.4
SMO352G0043 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 1.5e-116 423.7 353 65.2
AagrBONN_evm.TU.Sc2ySwM_117.785 Anthoceros agrestis HOM05D004327 ORTHO05D005032 8.1e-115 417.9 365 63.3
BcaB01g04461 Brassica carinata HOM05D004327 ORTHO05D005032 1.4e-114 417.2 284 85.2
Pp3c12_10100 Physcomitrium patens HOM05D004327 ORTHO05D005032 7.5e-113 411.4 359 61.6
Nitab4.5_0004572g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 1.0e-109 401.0 380 65.3
FAN17G0468 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.3e-109 400.6 330 70.3
Lj9A24G29 Lonicera japonica HOM05D004327 ORTHO05D005032 2.8e-107 392.9 268 78.7
TAR636G3612 Trochodendron aralioides HOM05D000809 ORTHO05D001196 1.4e-106 390.6 292 79.5
AT2G18876 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 6.8e-106 388.3 275 77.8
Pp3c5_23860 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.0e-105 386.7 341 60.4
MELO3C004022.2 Cucumis melo HOM05D004327 ORTHO05D005032 3.2e-103 379.4 312 70.2
Pp3c3_22200 Physcomitrium patens HOM05D004327 ORTHO05D005032 3.2e-103 379.4 346 59.8
Pp3c10_16450 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.3e-101 374.0 295 66.1
Nitab4.5_0005945g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 4.3e-100 369.0 367 62.7
Actinidia38633 Actinidia chinensis HOM05D004327 ORTHO05D005032 1.8e-98 363.6 286 70.6
SMO137G0257 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 4.0e-98 362.5 326 60.1
Mapoly0023s0050 Marchantia polymorpha HOM05D004327 ORTHO05D005032 2.9e-96 356.3 356 56.5
Haze_22092 Corylus avellana HOM05D004327 ORTHO05D005032 1.0e-93 347.8 267 72.3
CBR_g34541 Chara braunii HOM05D004327 ORTHO05D005032 1.5e-92 344.0 342 56.1
Pp3c16_10790 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.5e-92 343.2 354 54.0
Actinidia27011 Actinidia chinensis HOM05D004327 ORTHO05D005032 7.3e-92 341.7 306 69.3
Duzib170G0255 Durio zibethinus HOM05D004327 ORTHO05D005032 9.6e-92 341.3 218 85.3
CBR_g4121 Chara braunii HOM05D004327 ORTHO05D005032 1.3e-85 320.9 352 55.1
BcaC01g06490 Brassica carinata HOM05D004327 ORTHO05D005032 5.1e-85 318.9 174 96.6
Actinidia02748 Actinidia chinensis HOM05D004327 ORTHO05D005032 2.2e-80 303.5 224 75.9
BcaC01g06489 Brassica carinata HOM05D004327 ORTHO05D005032 9.7e-60 235.0 140 96.4
Aqoxy4G01695 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 6.5e-48 195.7 124 84.7
Oeu042171.1 Olea europaea HOM05D004327 ORTHO05D005032 2.5e-39 167.2 118 77.1
Haze_22093 Corylus avellana HOM05D004327 ORTHO05D005032 1.2e-38 164.9 140 70.0
FAN17G0800 Fragaria x ananassa HOM05D004327 ORTHO05D005032 4.7e-38 162.9 138 68.1
Lj9A25T20 Lonicera japonica HOM05D004327 ORTHO05D005032 5.2e-29 132.9 97 72.2
SEGI_01506 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 5.7e-28 129.4 101 70.3
HanXRQChr09g0245491 Helianthus annuus HOM05D000502 ORTHO05D005032 4.9e-27 126.3 79 73.4
HanXRQChr08g0229701 Helianthus annuus HOM05D000502 ORTHO05D005032 7.0e-26 122.5 70 78.6
HanXRQChr13g0404041 Helianthus annuus HOM05D000502 ORTHO05D005032 4.5e-25 119.8 72 76.4
BraA02t05921Z Brassica rapa HOM05D004327 ORTHO05D005032 7.7e-25 119.0 81 81.5
C02p14250 Brassica napus HOM05D004327 ORTHO05D032179 1.9e-23 114.4 128 57.8
BcaB05g22345 Brassica carinata HOM05D004327 ORTHO05D005032 4.4e-20 103.2 93 64.5
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 5.7e-20 102.8 100 50.0
SEGI_38031 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 7.5e-20 102.4 82 68.3
CiPaw.01G111100 Carya illinoinensis HOM05D002292 ORTHO05D005032 2.3e-16 90.9 58 87.9
Aqoxy7G03035 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 3.9e-16 90.1 130 46.2
BcaC03g14154 Brassica carinata HOM05D004327 ORTHO05D032179 6.6e-16 89.4 76 63.2
BolC9t54329H Brassica oleracea HOM05D004327 ORTHO05D005032 6.2e-14 82.8 62 74.2
COL.COLO4_28287 Corchorus olitorius HOM05D004327 ORTHO05D005032 3.1e-13 80.5 53 86.8
Pp3c25_9090 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.0e-12 77.8 97 51.5
Glyma.09G140000 Glycine max HOM05D004327 ORTHO05D005032 7.5e-12 75.9 74 52.7
Oeu003512.1 Olea europaea HOM05D004327 ORTHO05D005032 2.9e-11 73.9 42 85.7
CiPaw.16G058000 Carya illinoinensis HOM05D002292 ORTHO05D003256 1.5e-07 61.6 38 89.5
BolC2t07549H Brassica oleracea HOM05D004327 ORTHO05D032179 4.7e-06 56.6 74 56.8
PRCOL_00002192 Prasinoderma coloniale HOM05D004327 ORTHO05D005032 8.1e-06 55.8 249 24.5


User provided reference genes

Program Settings