Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g17560 Schrenkiella parvula HOM05D005924 ORTHO05D007290 7.7e-74 280.4 144 100.0
Thhalv10014966m.g Eutrema salsugineum HOM05D005924 ORTHO05D007290 4.4e-61 238.0 144 86.1
BcaC04g20212 Brassica carinata HOM05D005924 ORTHO05D007290 5.0e-57 224.6 147 81.6
C09p46620 Brassica napus HOM05D005924 ORTHO05D007290 5.0e-57 224.6 147 81.6
BolC9t57514H Brassica oleracea HOM05D005924 ORTHO05D007290 1.2e-55 219.9 149 80.5
AT5G55640 Arabidopsis thaliana HOM05D005924 ORTHO05D007290 3.0e-54 215.3 149 81.9
Carub.0008s1601 Capsella rubella HOM05D005924 ORTHO05D007290 3.7e-52 208.4 148 79.1
BraA10t43385Z Brassica rapa HOM05D005924 ORTHO05D007290 2.0e-50 202.6 149 76.5
BcaB08g35925 Brassica carinata HOM05D005924 ORTHO05D007290 7.8e-50 200.7 149 75.8
A10p12930 Brassica napus HOM05D005924 ORTHO05D007290 7.8e-50 200.7 149 76.5
CARHR268960 Cardamine hirsuta HOM05D005924 ORTHO05D007290 3.0e-49 198.7 128 81.2
Aa31LG3G11590 Aethionema arabicum HOM05D005924 ORTHO05D007290 4.7e-47 191.4 153 69.9
AL8G31220 Arabidopsis lyrata HOM05D005924 ORTHO05D007290 2.3e-46 189.1 145 75.9
C09p47070 Brassica napus HOM05D005924 ORTHO05D007290 2.0e-45 186.0 125 80.8
BcaC04g20171 Brassica carinata HOM05D005924 ORTHO05D007290 9.5e-40 167.2 92 91.3
QL11p054318 Quercus lobata HOM05D005924 ORTHO05D007290 1.2e-39 166.8 137 65.0
Gohir.D05G383300 Gossypium hirsutum HOM05D005924 ORTHO05D007290 1.6e-39 166.4 144 64.6
QL08p004337 Quercus lobata HOM05D005924 ORTHO05D007290 1.6e-39 166.4 137 65.0
RcHm_v2.0_Chr5g0053761 Rosa chinensis HOM05D005924 ORTHO05D007290 2.8e-39 165.6 125 71.2
GSVIVG01014668001 Vitis vinifera HOM05D005924 ORTHO05D007290 3.6e-39 165.2 144 66.0
CiPaw.12G137600 Carya illinoinensis HOM05D005924 ORTHO05D007290 4.7e-39 164.9 132 66.7
Duzib213G0633 Durio zibethinus HOM05D005924 ORTHO05D007290 4.7e-39 164.9 135 68.9
FvH4_3g29370 Fragaria vesca HOM05D005924 ORTHO05D007290 3.1e-38 162.2 144 65.3
FAN11G0697 Fragaria x ananassa HOM05D005924 ORTHO05D007290 3.1e-38 162.2 144 65.3
THA.LOC104811656 Tarenaya hassleriana HOM05D005924 ORTHO05D007290 3.1e-38 162.2 147 64.6
CANSAT11G0122 Cannabis sativa HOM05D005924 ORTHO05D007290 4.0e-38 161.8 150 62.0
COL.COLO4_09820 Corchorus olitorius HOM05D005924 ORTHO05D007290 4.0e-38 161.8 135 67.4
Gohir.A04G006200 Gossypium hirsutum HOM05D005924 ORTHO05D007290 5.2e-38 161.4 144 63.2
Haze_09815 Corylus avellana HOM05D005924 ORTHO05D007290 6.8e-38 161.0 129 68.2
Dinv40851 Davidia involucrata HOM05D005924 ORTHO05D007290 6.8e-38 161.0 146 63.7
FAN25G0770 Fragaria x ananassa HOM05D005924 ORTHO05D007290 1.2e-37 160.2 131 67.2
Ciclev10009817m.g Citrus clementina HOM05D005924 ORTHO05D007290 1.5e-37 159.8 130 68.5
FAN21G3132 Fragaria x ananassa HOM05D005924 ORTHO05D007290 2.6e-37 159.1 144 63.9
Manes.15G060600 Manihot esculenta HOM05D005924 ORTHO05D007290 2.6e-37 159.1 139 64.7
Prupe.4G242300 Prunus persica HOM05D005924 ORTHO05D007290 3.4e-37 158.7 145 63.4
Cfa020200 Carpinus fangiana HOM05D005924 ORTHO05D007290 4.4e-37 158.3 130 67.7
MD11G1201100 Malus domestica HOM05D005924 ORTHO05D007290 4.4e-37 158.3 129 69.0
Thecc.07G014800 Theobroma cacao HOM05D005924 ORTHO05D007290 7.5e-37 157.5 132 65.9
Cpa.g.sc12.154 Carica papaya HOM05D005924 ORTHO05D007290 1.3e-36 156.8 123 68.3
Sabra16G0240500 Salix brachista HOM05D005924 ORTHO05D007290 3.7e-36 155.2 144 61.8
MD03G1184300 Malus domestica HOM05D005924 ORTHO05D007290 4.9e-36 154.8 129 65.1
Dinv10325 Davidia involucrata HOM05D005924 ORTHO05D007290 1.1e-35 153.7 148 60.8
CSS0023895 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 1.4e-35 153.3 129 65.9
arahy.Tifrunner.gnm1.ann1.7P25LN Arachis hypogaea HOM05D005924 ORTHO05D007290 1.9e-35 152.9 139 60.4
arahy.Tifrunner.gnm1.ann1.RJW0MD Arachis hypogaea HOM05D005924 ORTHO05D007290 1.9e-35 152.9 139 60.4
Actinidia30411 Actinidia chinensis HOM05D005924 ORTHO05D007290 2.4e-35 152.5 130 63.8
Lj8A178T78 Lonicera japonica HOM05D005924 ORTHO05D007290 5.4e-35 151.4 127 66.1
ClCG09G021250 Citrullus lanatus HOM05D005924 ORTHO05D007290 7.1e-35 151.0 127 66.9
Ca_06392_v3 Cicer arietinum L. HOM05D005924 ORTHO05D007290 9.2e-35 150.6 131 63.4
Eucgr.F02053 Eucalyptus grandis HOM05D005924 ORTHO05D007290 9.2e-35 150.6 131 65.6
Hma1.2p1_0036F.1_g022440 Hydrangea macrophylla HOM05D005924 ORTHO05D007290 9.2e-35 150.6 144 60.4
Potri.001G367200 Populus trichocarpa HOM05D005924 ORTHO05D007290 9.2e-35 150.6 144 59.7
ECA246G3128 Erigeron canadensis HOM05D005924 ORTHO05D007290 1.2e-34 150.2 128 64.8
Oeu057095.1 Olea europaea HOM05D005924 ORTHO05D007290 1.2e-34 150.2 130 63.8
Gorai.009G449900 Gossypium raimondii HOM05D005924 ORTHO05D007290 1.6e-34 149.8 123 65.9
TWI39G1162 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 1.6e-34 149.8 133 66.9
CsaV3_7G015090 Cucumis sativus L. HOM05D005924 ORTHO05D007290 2.1e-34 149.4 127 65.4
TAR629G1982 Trochodendron aralioides HOM05D001060 ORTHO05D000905 2.7e-34 149.1 144 61.8
Actinidia26779 Actinidia chinensis HOM05D005924 ORTHO05D007290 6.0e-34 147.9 133 63.9
Sed0014433 Sechium edule HOM05D005924 ORTHO05D007290 6.0e-34 147.9 128 64.8
CSS0025987 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 1.0e-33 147.1 135 63.7
CSS0049690 Camellia sinensis var. sinensis HOM05D005924 ORTHO05D007290 1.0e-33 147.1 135 63.7
Nn1g03196 Nelumbo nucifera HOM05D005924 ORTHO05D007290 1.7e-33 146.4 146 59.6
SGA_v2.0_scaffold8G04406 Striga asiatica HOM05D005924 ORTHO05D007290 1.7e-33 146.4 145 58.6
Migut.H01759 Erythranthe guttata HOM05D005924 ORTHO05D007290 2.3e-33 146.0 147 59.9
Lj6g0020710 Lotus japonicus HOM05D005924 ORTHO05D007290 2.3e-33 146.0 131 59.5
vmacro09651 Vaccinium macrocarpon HOM05D005924 ORTHO05D007290 2.3e-33 146.0 134 62.7
BolC9t57844H Brassica oleracea HOM05D005924 ORTHO05D007290 3.9e-33 145.2 100 82.0
TWI38G0037 Tripterygium wilfordii HOM05D005924 ORTHO05D007290 3.9e-33 145.2 134 63.4
Rhsim04G0012900 Rhododendron simsii HOM05D005924 ORTHO05D007290 5.1e-33 144.8 132 62.9
Psat2g007680 Pisum sativum HOM05D000001 ORTHO05D000003 6.6e-33 144.4 135 60.7
Aqoxy1G04252 Aquilegia oxysepala HOM05D005924 ORTHO05D007290 8.6e-33 144.1 145 60.0
CiPaw.11G203100 Carya illinoinensis HOM05D005924 ORTHO05D007290 8.6e-33 144.1 129 62.0
MELO3C024930.2 Cucumis melo HOM05D005924 ORTHO05D007290 8.6e-33 144.1 127 63.8
PGR083G1797 Punica granatum HOM05D005924 ORTHO05D007290 8.6e-33 144.1 149 57.7
Glyma.02G300000 Glycine max HOM05D005924 ORTHO05D007290 1.1e-32 143.7 131 60.3
HanXRQChr08g0231191 Helianthus annuus HOM05D005924 ORTHO05D007290 1.1e-32 143.7 133 61.7
Lsat_1_v5_gn_5_1420 Lactuca sativa HOM05D005924 ORTHO05D007290 1.5e-32 143.3 148 60.1
Medtr5g095700 Medicago truncatula HOM05D005924 ORTHO05D007290 1.5e-32 143.3 146 58.2
MSTRG.13019 Avicennia marina HOM05D005924 ORTHO05D007290 1.9e-32 142.9 129 62.8
Phvul.008G278700 Phaseolus vulgaris HOM05D005924 ORTHO05D007290 1.9e-32 142.9 130 60.8
Oeu049375.1 Olea europaea HOM05D005924 ORTHO05D007290 2.5e-32 142.5 135 60.0
TPR.G8617 Trifolium pratense HOM05D005924 ORTHO05D007290 3.3e-32 142.1 132 61.4
VMungo0647G1823 Vigna mungo HOM05D005924 ORTHO05D007290 3.3e-32 142.1 131 62.6
Glyma.14G013900 Glycine max HOM05D005924 ORTHO05D007290 4.3e-32 141.7 132 59.1
BcaC04g19914 Brassica carinata HOM05D005924 ORTHO05D007290 9.5e-32 140.6 100 80.0
Peaxi162Scf01164g00127 Petunia axillaris HOM05D005924 ORTHO05D007290 9.5e-32 140.6 130 60.0
Hund23125 Selenicereus undatus HOM05D005924 ORTHO05D007290 1.6e-31 139.8 128 60.2
Cc05_g14880 Coffea canephora HOM05D005924 ORTHO05D007290 2.1e-31 139.4 148 60.1
Lalb_Chr04g0247881 Lupinus albus HOM05D005924 ORTHO05D007290 2.1e-31 139.4 148 57.4
CDE10G1040 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 6.2e-31 137.9 128 55.5
MBI16_g07767_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 6.2e-31 137.9 126 61.9
DCAR_018844 Daucus carota HOM05D005924 ORTHO05D007290 8.1e-31 137.5 132 57.6
Oeu049390.1 Olea europaea HOM05D005924 ORTHO05D007290 8.1e-31 137.5 125 63.2
Actinidia37157 Actinidia chinensis HOM05D005924 ORTHO05D007290 1.4e-30 136.7 123 65.0
AUR62036411 Chenopodium quinoa HOM05D005924 ORTHO05D007290 1.8e-30 136.3 134 58.2
CDE10G1343 Ceratophyllum demersum HOM05D005924 ORTHO05D007290 2.4e-30 136.0 141 52.5
Sed0006731 Sechium edule HOM05D005924 ORTHO05D007290 2.4e-30 136.0 128 62.5
ATR0624G098 Amborella trichopoda HOM05D005924 ORTHO05D007290 4.0e-30 135.2 132 57.6
Solyc07g065480.3 Solanum lycopersicum HOM05D005924 ORTHO05D007290 5.2e-30 134.8 147 53.7
AUR62036442 Chenopodium quinoa HOM05D005924 ORTHO05D007290 1.2e-29 133.7 134 56.7
MBI19_g12833_MAGBIO Magnolia biondii HOM05D005924 ORTHO05D007290 1.5e-29 133.3 147 55.1
Sopen07g033690 Solanum pennellii HOM05D005924 ORTHO05D007290 2.0e-29 132.9 145 53.8
Nitab4.5_0000461g0270 Nicotiana tabacum HOM05D005924 ORTHO05D007290 2.6e-29 132.5 151 53.6
PGSC0003DMG400022173 Solanum tuberosum HOM05D005924 ORTHO05D007290 2.6e-29 132.5 147 53.1
AUR62017085 Chenopodium quinoa HOM05D005924 ORTHO05D007290 1.3e-28 130.2 134 57.5
unitig_0.g996 Utricularia gibba HOM05D005924 ORTHO05D007290 1.3e-28 130.2 129 53.5
PSO302G0279 Papaver somniferum HOM05D005924 ORTHO05D007290 3.8e-28 128.6 146 53.4
Sc16g0008020 Simmondsia chinensis HOM05D005924 ORTHO05D007290 3.8e-28 128.6 128 59.4
Nitab4.5_0014607g0010 Nicotiana tabacum HOM05D005924 ORTHO05D007290 6.4e-28 127.9 151 52.3
PSO210G6324 Papaver somniferum HOM05D005924 ORTHO05D007290 8.4e-28 127.5 146 53.4
EL10Ac4g07594 Beta vulgaris HOM05D005924 ORTHO05D007290 5.4e-27 124.8 145 56.6
Atru.BG.148.p Acer truncatum HOM05D005924 ORTHO05D007290 2.7e-26 122.5 91 70.3
SEGI_16066 Sequoiadendron giganteum HOM05D005924 ORTHO05D007290 7.8e-26 120.9 146 47.3
Ah.06g181380 Amaranthus hybridus HOM05D000864 ORTHO05D002353 6.6e-25 117.9 146 52.1
Os03g0595200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 2.5e-24 115.9 123 49.6
QL08p004311 Quercus lobata HOM05D005924 ORTHO05D007290 2.5e-24 115.9 117 55.6
Pp3c6_3770 Physcomitrium patens HOM05D005924 ORTHO05D007290 1.1e-22 110.5 137 45.3
Manes.03G140800 Manihot esculenta HOM05D005924 ORTHO05D007290 1.5e-21 106.7 122 57.4
HPP92_006039 Vanilla planifolia HOM05D005924 ORTHO05D007290 2.0e-21 106.3 122 51.6
Mapoly0038s0106 Marchantia polymorpha HOM05D005924 ORTHO05D007290 2.6e-21 105.9 134 47.8
Pp3c5_24890 Physcomitrium patens HOM05D005924 ORTHO05D007290 2.6e-21 105.9 136 44.1
Zm00001eb049780 Zea mays HOM05D005924 ORTHO05D007290 3.4e-21 105.5 126 48.4
SMO145G0101 Selaginella moellendorffii HOM05D005924 ORTHO05D007290 9.3e-19 97.4 137 45.3
arahy.Tifrunner.gnm1.ann1.HJ67LJ Arachis hypogaea HOM05D005924 ORTHO05D007290 1.3e-15 87.0 95 56.8
TAR626G0711 Trochodendron aralioides HOM05D005924 ORTHO05D007290 2.8e-15 85.9 131 47.3
BolC9t57846H Brassica oleracea HOM05D005924 ORTHO05D007290 4.0e-14 82.0 62 75.8
C09p49910 Brassica napus HOM05D005924 ORTHO05D007290 6.9e-14 81.3 51 76.5
C09p49940 Brassica napus HOM05D002024 ORTHO05D007288 1.5e-13 80.1 62 74.2
Os03g0412200 Oryza sativa ssp. japonica HOM05D005924 ORTHO05D007290 5.4e-11 71.6 108 42.6
TAR371G0507 Trochodendron aralioides HOM05D005924 ORTHO05D007290 5.1e-09 65.1 76 47.4
Zm00001eb019850 Zea mays HOM05D005924 ORTHO05D007290 3.3e-08 62.4 103 37.9
CBR_g27765 Chara braunii HOM05D005924 ORTHO05D007290 1.8e-06 56.6 126 34.9
AagrBONN_evm.TU.Sc2ySwM_340.252 Anthoceros agrestis HOM05D005924 ORTHO05D007290 5.3e-06 55.1 83 41.0
PSO210G6050 Papaver somniferum HOM05D000045 ORTHO05D000067 5.3e-06 55.1 85 48.2
arahy.Tifrunner.gnm1.ann1.7WZH36 Arachis hypogaea HOM05D005924 ORTHO05D007290 6.9e-06 54.7 54 46.3


User provided reference genes

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