Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g16010 Schrenkiella parvula HOM05D012500 ORTHO05D009211 3.9e-211 738.4 538 100.0
C02p17810 Brassica napus HOM05D012500 ORTHO05D009211 6.8e-123 445.3 392 69.6
BolC2t07910H Brassica oleracea HOM05D012500 ORTHO05D009211 4.4e-122 442.6 391 69.3
BcaC03g14367 Brassica carinata HOM05D012500 ORTHO05D009211 1.4e-120 437.6 392 69.1
BcaB05g22092 Brassica carinata HOM05D012500 ORTHO05D009211 4.2e-117 426.0 390 73.1
Thhalv10013275m.g Eutrema salsugineum HOM05D012500 ORTHO05D009211 1.4e-115 421.0 406 70.7
Carub.0008s1424 Capsella rubella HOM05D012500 ORTHO05D009211 1.1e-112 411.4 409 66.7
A02p10690 Brassica napus HOM05D012500 ORTHO05D009211 4.6e-111 406.0 393 67.2
BraA02t06132Z Brassica rapa HOM05D012500 ORTHO05D009211 1.7e-110 404.1 393 67.2
AL8G29040 Arabidopsis lyrata HOM05D012500 ORTHO05D009211 5.2e-107 392.5 413 64.2
AT5G53930 Arabidopsis thaliana HOM05D012500 ORTHO05D009211 3.2e-104 383.3 412 65.3
CARHR267070 Cardamine hirsuta HOM05D012500 ORTHO05D009211 4.4e-74 283.1 380 55.5
Aa31LG3G10020 Aethionema arabicum HOM05D012500 ORTHO05D009211 3.7e-60 236.9 414 50.7
THA.LOC104799933 Tarenaya hassleriana HOM05D012500 ORTHO05D009211 8.2e-52 209.1 346 44.2
CANSAT56G4073 Cannabis sativa HOM05D007892 ORTHO05D009211 4.7e-15 87.0 479 29.9
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 1.3e-12 79.0 433 27.0
RcHm_v2.0_Chr5g0032741 Rosa chinensis HOM05D007892 ORTHO05D009211 1.8e-11 75.1 382 28.5
Cfa020559 Carpinus fangiana HOM05D007892 ORTHO05D009211 1.2e-10 72.4 430 27.2
FAN25G2763 Fragaria x ananassa HOM05D007892 ORTHO05D009211 1.2e-10 72.4 485 27.8
Dinv20199 Davidia involucrata HOM05D007892 ORTHO05D009211 7.7e-10 69.7 488 26.0
FAN11G1893 Fragaria x ananassa HOM05D007892 ORTHO05D009211 7.7e-10 69.7 492 27.6
ClCG11G017870 Citrullus lanatus HOM05D007892 ORTHO05D009211 1.3e-09 68.9 477 27.0
CSS0005747 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 3.8e-09 67.4 488 26.2
FAN16G1540 Fragaria x ananassa HOM05D007892 ORTHO05D009211 6.5e-09 66.6 481 27.7
CSS0030192 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 8.5e-09 66.2 488 26.2
Glyma.12G226900 Glycine max HOM05D007892 ORTHO05D009211 1.9e-08 65.1 446 26.9
FAN21G3246 Fragaria x ananassa HOM05D007892 ORTHO05D009211 2.5e-08 64.7 489 27.2
Gorai.002G067800 Gossypium raimondii HOM05D007892 ORTHO05D009211 2.5e-08 64.7 493 27.2
Lsat_1_v5_gn_7_104640 Lactuca sativa HOM05D007892 ORTHO05D009211 4.2e-08 63.9 344 28.2
FvH4_3g19480 Fragaria vesca HOM05D007892 ORTHO05D009211 5.5e-08 63.5 488 27.3
Gohir.D01G048000 Gossypium hirsutum HOM05D007892 ORTHO05D009211 9.5e-08 62.8 485 26.0
MD03G1231500 Malus domestica HOM05D007892 ORTHO05D009211 9.5e-08 62.8 483 24.4
HanXRQChr11g0351991 Helianthus annuus HOM05D007892 ORTHO05D009211 1.6e-07 62.0 421 28.0
TPR.G7948 Trifolium pratense HOM05D007892 ORTHO05D009211 2.1e-07 61.6 34 88.2
TWI38G1391 Tripterygium wilfordii HOM05D007892 ORTHO05D009211 4.7e-07 60.5 453 26.7
CiPaw.11G172000 Carya illinoinensis HOM05D007892 ORTHO05D009211 8.0e-07 59.7 499 27.9
AUR62036164 Chenopodium quinoa HOM05D007892 ORTHO05D009211 1.0e-06 59.3 34 85.3
Phvul.010G112300 Phaseolus vulgaris HOM05D007892 ORTHO05D009211 1.0e-06 59.3 344 27.3
ATR0150G007 Amborella trichopoda HOM05D007892 ORTHO05D009211 2.3e-06 58.2 34 82.4
arahy.Tifrunner.gnm1.ann1.8Q202K Arachis hypogaea HOM05D007892 ORTHO05D009211 2.3e-06 58.2 505 24.4
Gohir.A01G061400 Gossypium hirsutum HOM05D007892 ORTHO05D009211 2.3e-06 58.2 431 25.5
vmacro11887 Vaccinium macrocarpon HOM05D007892 ORTHO05D009211 3.0e-06 57.8 451 27.1
Aqoxy1G02331 Aquilegia oxysepala HOM05D007892 ORTHO05D009211 4.0e-06 57.4 34 82.4
arahy.Tifrunner.gnm1.ann1.N2Q107 Arachis hypogaea HOM05D007892 ORTHO05D009211 4.0e-06 57.4 34 79.4
Duzib268G0896 Durio zibethinus HOM05D007892 ORTHO05D009211 4.0e-06 57.4 34 79.4
CsaV3_4G033500 Cucumis sativus L. HOM05D007892 ORTHO05D009211 5.2e-06 57.0 466 25.3
Prupe.4G176400 Prunus persica HOM05D007892 ORTHO05D009211 5.2e-06 57.0 498 25.7
Duzib244G0002 Durio zibethinus HOM05D007892 ORTHO05D009211 6.8e-06 56.6 34 79.4
Thecc.07G095700 Theobroma cacao HOM05D007892 ORTHO05D009211 6.8e-06 56.6 535 24.7


User provided reference genes

Program Settings