Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g14700 Schrenkiella parvula HOM05D008661 ORTHO05D010872 0.0e+00 1669.4 836 100.0
AL8G26990 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 5.3e-199 698.7 889 50.8
AT5G52530 Arabidopsis thaliana HOM05D008661 ORTHO05D010872 7.1e-196 688.3 848 51.7
Aa31LG3G8880 Aethionema arabicum HOM05D008661 ORTHO05D010872 3.7e-184 649.4 919 48.9
Carub.0008s1265 Capsella rubella HOM05D008661 ORTHO05D010872 1.2e-174 617.8 843 48.0
BcaB03g12481 Brassica carinata HOM05D008661 ORTHO05D010872 8.8e-146 521.9 898 43.1
CARHR233070 Cardamine hirsuta HOM05D008661 ORTHO05D010872 5.4e-143 512.7 899 42.8
C08p09590 Brassica napus HOM05D008661 ORTHO05D010872 4.5e-142 509.6 835 44.0
BraA08t34056Z Brassica rapa HOM05D008661 ORTHO05D010872 6.6e-141 505.8 835 43.8
BcaC07g38204 Brassica carinata HOM05D008661 ORTHO05D010872 8.6e-141 505.4 874 43.1
BolC8t48627H Brassica oleracea HOM05D008661 ORTHO05D010872 8.6e-141 505.4 874 43.1
AL7G27440 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 1.4e-138 498.0 911 42.2
THA.LOC104800273 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 5.2e-138 496.1 921 41.5
BcaB03g12479 Brassica carinata HOM05D008661 ORTHO05D010872 1.7e-136 491.1 877 42.1
Sp7g23680 Schrenkiella parvula HOM05D008661 ORTHO05D010872 3.2e-135 486.9 824 44.5
A08p21040 Brassica napus HOM05D008661 ORTHO05D010872 4.6e-134 483.0 839 42.9
Carub.0007s1533 Capsella rubella HOM05D008661 ORTHO05D010872 1.0e-133 481.9 904 41.8
BcaC04g20573 Brassica carinata HOM05D008661 ORTHO05D010872 1.8e-130 471.1 865 40.7
BcaB08g35607 Brassica carinata HOM05D008661 ORTHO05D010872 3.4e-129 466.8 865 40.8
CARHR233080 Cardamine hirsuta HOM05D008661 ORTHO05D010872 3.0e-125 453.8 918 40.7
BolC9t57083H Brassica oleracea HOM05D008661 ORTHO05D010872 3.3e-124 450.3 860 39.9
C09p42010 Brassica napus HOM05D008661 ORTHO05D010872 2.2e-120 437.6 860 39.2
BraA10t43090Z Brassica rapa HOM05D008661 ORTHO05D010872 6.0e-118 429.5 864 38.7
Carub.0238s0001 Capsella rubella HOM05D008661 ORTHO05D010872 2.7e-110 404.1 752 42.3
BcaC04g20566 Brassica carinata HOM05D008661 ORTHO05D010872 1.0e-109 402.1 859 38.3
THA.LOC104811963 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 2.5e-108 397.5 832 39.9
A10p10120 Brassica napus HOM05D008661 ORTHO05D010872 5.8e-105 386.3 860 37.2
BcaC04g20572 Brassica carinata HOM05D008661 ORTHO05D010872 9.9e-105 385.6 845 37.5
BraA10t43092Z Brassica rapa HOM05D008661 ORTHO05D010872 1.3e-104 385.2 861 37.0
C09p42020 Brassica napus HOM05D008661 ORTHO05D010872 8.4e-104 382.5 829 37.8
BolC9t57085H Brassica oleracea HOM05D008661 ORTHO05D010872 8.4e-104 382.5 829 37.8
Thhalv10024596m.g Eutrema salsugineum HOM05D008661 ORTHO05D010872 2.1e-102 377.9 666 43.2
A10p10090 Brassica napus HOM05D008661 ORTHO05D010872 5.6e-100 369.8 864 36.2
A10p10100 Brassica napus HOM05D008661 ORTHO05D010872 3.5e-94 350.5 864 35.8
A08p21060 Brassica napus HOM05D008661 ORTHO05D010872 1.1e-82 312.4 542 41.9
A10p10130 Brassica napus HOM05D008661 ORTHO05D010872 4.2e-71 273.9 855 32.0
BraA10t43093Z Brassica rapa HOM05D008661 ORTHO05D010872 2.3e-69 268.1 855 31.7
BolC9t57086H Brassica oleracea HOM05D008661 ORTHO05D010872 4.5e-65 253.8 849 31.2
C09p42030 Brassica napus HOM05D008661 ORTHO05D010872 8.5e-56 223.0 455 39.1
BcaC04g20571 Brassica carinata HOM05D008661 ORTHO05D010872 4.4e-44 184.1 438 35.2
BcaC04g20567 Brassica carinata HOM05D008661 ORTHO05D010872 6.1e-38 163.7 471 32.1
BcaC04g20569 Brassica carinata HOM05D008661 ORTHO05D010872 6.8e-29 133.7 324 35.5
Cpa.g.sc107.97 Carica papaya HOM05D006627 ORTHO05D007753 8.6e-24 116.7 968 26.5
TWI14G0178 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 2.3e-21 108.6 1058 24.2
Ciclev10004200m.g Citrus clementina HOM05D006627 ORTHO05D007753 1.2e-17 96.3 520 28.1
Prupe.2G299600 Prunus persica HOM05D006627 ORTHO05D007753 1.6e-17 95.9 322 30.1
Atru.chr1.369 Acer truncatum HOM05D006627 ORTHO05D007753 2.0e-17 95.5 1051 23.3
Atru.ctg97_1.2 Acer truncatum HOM05D006627 ORTHO05D007753 2.0e-17 95.5 1051 23.3
CSS0035854 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 4.6e-17 94.4 309 28.5
CSS0044230 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 4.6e-17 94.4 309 28.5
Atru.chr1.386 Acer truncatum HOM05D006627 ORTHO05D007753 1.0e-16 93.2 1045 23.4
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 5.0e-16 90.9 293 31.1
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 3.3e-15 88.2 299 31.8
Potri.004G079000 Populus trichocarpa HOM05D006627 ORTHO05D007753 1.2e-14 86.3 522 27.4
TWI23G0587 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 2.1e-14 85.5 506 28.5
COL.COLO4_28015 Corchorus olitorius HOM05D006627 ORTHO05D007753 2.8e-14 85.1 524 26.7
MD01G1207000 Malus domestica HOM05D006627 ORTHO05D007753 6.2e-14 84.0 320 29.4
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 8.0e-14 83.6 668 24.7
FAN03G1328 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.4e-13 82.8 313 29.4
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 2.3e-13 82.0 366 27.0
BcaC04g20568 Brassica carinata HOM05D008661 ORTHO05D010872 3.1e-13 81.6 163 39.3
FAN03G3330 Fragaria x ananassa HOM05D006627 ORTHO05D007753 4.0e-13 81.3 313 29.4
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 4.0e-13 81.3 372 26.3
Sabra04G0052500 Salix brachista HOM05D006627 ORTHO05D007753 4.0e-13 81.3 545 27.0
FAN10G1026 Fragaria x ananassa HOM05D006627 ORTHO05D007753 5.2e-13 80.9 304 29.6
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 5.2e-13 80.9 313 26.8
Sabra17G0119400 Salix brachista HOM05D001410 ORTHO05D006840 5.2e-13 80.9 549 27.7
ECA233G6261 Erigeron canadensis HOM05D006627 ORTHO05D007753 8.9e-13 80.1 353 27.5
FAN10G1355 Fragaria x ananassa HOM05D006627 ORTHO05D007753 8.9e-13 80.1 304 29.6
AUR62027266 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.2e-12 79.7 250 30.4
FAN06G3118 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.2e-12 79.7 325 29.2
RcHm_v2.0_Chr1g0378101 Rosa chinensis HOM05D006627 ORTHO05D007753 1.2e-12 79.7 312 28.8
FvH4_7g30110 Fragaria vesca HOM05D006627 ORTHO05D007753 1.5e-12 79.3 293 29.4
FAN06G3804 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.6e-12 78.6 308 28.6
Rhsim07G0129200 Rhododendron simsii HOM05D006627 ORTHO05D007753 3.4e-12 78.2 328 28.0
vmacro06638 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 3.4e-12 78.2 303 28.4
Gohir.A10G234800 Gossypium hirsutum HOM05D006627 ORTHO05D007753 4.4e-12 77.8 898 24.1
Duzib205G1471 Durio zibethinus HOM05D006627 ORTHO05D007753 5.8e-12 77.4 1164 23.4
FAN01G2627 Fragaria x ananassa HOM05D006627 ORTHO05D007753 5.8e-12 77.4 292 31.5
Potri.017G142600 Populus trichocarpa HOM05D006627 ORTHO05D007753 7.5e-12 77.0 478 27.4
Thecc.03G182600 Theobroma cacao HOM05D006627 ORTHO05D007753 1.7e-11 75.9 530 28.5
MD07G1277900 Malus domestica HOM05D006627 ORTHO05D007753 2.9e-11 75.1 1164 23.8
Sc22g0005410 Simmondsia chinensis HOM05D006627 ORTHO05D007753 3.7e-11 74.7 308 28.6
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 4.9e-11 74.3 300 25.3
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.1e-10 73.2 249 29.7
Lsat_1_v5_gn_6_5180 Lactuca sativa HOM05D006627 ORTHO05D007753 1.1e-10 73.2 581 25.3
Dinv28394 Davidia involucrata HOM05D006627 ORTHO05D007753 1.9e-10 72.4 321 27.7
Rhsim03G0190100 Rhododendron simsii HOM05D006627 ORTHO05D007753 1.9e-10 72.4 321 28.7
Rhsim07G0129400 Rhododendron simsii HOM05D006627 ORTHO05D007753 1.9e-10 72.4 327 26.6
EL10Ac5g12810 Beta vulgaris HOM05D006627 ORTHO05D007753 2.4e-10 72.0 413 26.9
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 3.2e-10 71.6 315 27.6
AUR62027265 Chenopodium quinoa HOM05D006627 ORTHO05D007753 3.2e-10 71.6 399 26.6
Duzib084G0535 Durio zibethinus HOM05D006627 ORTHO05D007753 3.2e-10 71.6 528 26.7
HanXRQChr13g0394821 Helianthus annuus HOM05D006627 ORTHO05D007753 4.1e-10 71.2 335 26.3
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 4.1e-10 71.2 334 25.7
Actinidia31835 Actinidia chinensis HOM05D006627 ORTHO05D007753 5.4e-10 70.9 343 22.4
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 5.4e-10 70.9 315 27.9
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 5.4e-10 70.9 320 27.2
Oeu060456.3 Olea europaea HOM05D006627 ORTHO05D007753 7.0e-10 70.5 435 24.6
vmacro06637 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 7.0e-10 70.5 316 27.8
TAR374G1318 Trochodendron aralioides HOM05D006627 ORTHO05D007753 9.2e-10 70.1 241 28.6
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 2.7e-09 68.6 316 27.5
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 2.7e-09 68.6 326 26.7
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 3.5e-09 68.2 317 24.0
Ah.07g196520 Amaranthus hybridus HOM05D006627 ORTHO05D007753 3.5e-09 68.2 236 28.8
EL10Ac5g12809 Beta vulgaris HOM05D006627 ORTHO05D007753 3.5e-09 68.2 363 26.7
DCAR_020266 Daucus carota HOM05D006627 ORTHO05D007753 1.0e-08 66.6 296 28.0
Gorai.011G285600 Gossypium raimondii HOM05D006627 ORTHO05D007753 1.0e-08 66.6 898 23.3
EL10Ac3g05437 Beta vulgaris HOM05D006627 ORTHO05D007753 1.7e-08 65.9 355 25.6
Hund11448 Selenicereus undatus HOM05D006627 ORTHO05D007753 1.7e-08 65.9 442 24.0
Gohir.D10G247200 Gossypium hirsutum HOM05D006627 ORTHO05D007753 2.3e-08 65.5 898 22.7
Actinidia14583 Actinidia chinensis HOM05D006627 ORTHO05D007753 8.6e-08 63.5 306 26.5
EL10Ac5g12811 Beta vulgaris HOM05D006627 ORTHO05D007753 1.1e-07 63.2 320 26.9
HanXRQChr09g0252481 Helianthus annuus HOM05D029832 ORTHO05D007753 3.3e-07 61.6 550 24.7
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 3.3e-07 61.6 344 24.1
PGSC0003DMG400010123 Solanum tuberosum HOM05D006627 ORTHO05D007753 3.6e-06 58.2 324 27.2
CAN.G236.7 Capsicum annuum HOM05D006627 ORTHO05D007753 4.7e-06 57.8 322 26.7
Peaxi162Scf00618g00717 Petunia axillaris HOM05D006627 ORTHO05D007753 6.2e-06 57.4 349 23.5
Sopen03g004000 Solanum pennellii HOM05D006627 ORTHO05D007753 6.2e-06 57.4 321 26.2


User provided reference genes

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