Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 5.0e-252 874.0 455 100.0
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 1.2e-229 799.7 460 90.7
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 2.2e-223 778.9 455 88.1
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 2.9e-223 778.5 455 87.3
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 2.3e-220 768.8 455 88.6
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 2.3e-220 768.8 455 88.6
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 2.3e-220 768.8 455 88.6
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 6.6e-220 767.3 459 86.7
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 1.9e-219 765.8 455 87.7
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 1.2e-218 763.1 455 85.5
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 2.3e-212 742.3 455 85.9
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 1.5e-211 739.6 457 85.6
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 4.3e-211 738.0 455 85.5
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 2.4e-193 679.1 456 77.2
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 1.3e-151 540.4 465 61.3
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 4.4e-147 525.4 471 57.7
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 5.7e-147 525.0 474 57.8
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 9.7e-147 524.2 456 58.8
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 4.8e-146 521.9 469 57.8
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 1.9e-142 510.0 474 56.1
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 2.6e-139 499.6 478 57.1
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 1.3e-138 497.3 474 55.1
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 1.4e-137 493.8 472 57.0
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 3.8e-135 485.7 467 55.9
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 1.2e-133 480.7 465 55.5
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 2.1e-133 479.9 461 56.6
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 2.7e-133 479.6 461 55.7
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 8.0e-133 478.0 470 55.1
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 1.0e-132 477.6 461 56.4
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 4.4e-131 472.2 452 55.3
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 4.4e-131 472.2 472 53.6
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 1.7e-127 460.3 462 52.6
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 2.9e-127 459.5 464 53.0
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 5.0e-127 458.8 463 51.6
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 8.0e-125 451.4 475 52.4
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 2.3e-124 449.9 468 53.2
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 2.3e-124 449.9 453 53.2
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 3.0e-124 449.5 463 52.5
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 3.0e-124 449.5 466 52.6
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 8.8e-124 448.0 461 52.1
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 1.5e-123 447.2 461 51.2
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 2.0e-123 446.8 468 50.9
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 2.6e-123 446.4 473 49.9
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 4.4e-123 445.7 472 50.2
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 1.8e-121 440.3 451 52.1
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 5.0e-119 432.2 470 51.1
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 2.5e-118 429.9 450 50.2
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 2.1e-117 426.8 463 51.6
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 3.0e-116 422.9 457 49.7
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 4.0e-116 422.5 465 50.5
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 8.9e-116 421.4 467 47.8
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 2.0e-115 420.2 465 51.0
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 3.4e-115 419.5 466 51.1
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 5.7e-115 418.7 466 48.7
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 1.7e-114 417.2 462 50.6
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 4.9e-114 415.6 468 50.4
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 8.3e-114 414.8 468 48.3
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 7.0e-113 411.8 438 51.8
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 7.0e-113 411.8 448 48.2
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 1.2e-112 411.0 463 49.7
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.6e-112 410.6 468 47.9
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 1.0e-111 407.9 466 47.6
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 1.0e-111 407.9 461 48.8
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 2.9e-111 406.4 459 48.4
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 8.6e-111 404.8 454 47.8
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 2.5e-110 403.3 232 87.9
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 2.5e-110 403.3 451 46.6
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 3.3e-110 402.9 451 46.6
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 2.1e-109 400.2 460 48.3
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 2.8e-109 399.8 426 50.2
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 5.8e-107 392.1 448 48.9
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 9.8e-107 391.3 407 53.8
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 7.0e-105 385.2 451 46.8
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.6e-104 384.0 432 49.3
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 2.0e-104 383.6 396 51.8
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 4.6e-104 382.5 355 56.3
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 7.8e-104 381.7 407 52.8
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 1.0e-103 381.3 449 45.0
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 5.6e-102 375.6 445 49.0
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 3.6e-101 372.9 405 48.4
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.8e-100 370.5 373 53.4
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 2.3e-100 370.2 398 54.0
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 3.7e-98 362.8 421 49.4
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 1.1e-97 361.3 466 43.3
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 9.2e-97 358.2 398 48.7
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 1.0e-95 354.8 437 46.2
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 9.2e-89 331.6 465 46.2
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.2e-85 321.2 352 52.6
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 1.1e-78 298.1 595 33.9
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 2.4e-73 280.4 436 39.0
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 1.1e-70 271.6 262 56.5
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 2.6e-67 260.4 233 53.6
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 1.0e-63 248.4 329 44.4
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.8e-63 247.7 451 39.2
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 9.0e-60 235.3 527 32.8
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 2.0e-59 234.2 251 47.4
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 1.0e-47 195.3 145 65.5
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 1.9e-46 191.0 116 84.5
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 3.4e-43 180.3 461 29.1
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 2.7e-40 170.6 307 35.2
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 1.3e-34 151.8 446 30.0
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 8.8e-31 139.0 519 25.4
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 4.8e-29 133.3 460 27.8
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 9.1e-28 129.0 453 28.3
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea HOM05D006594 ORTHO05D008383 1.2e-27 128.6 203 37.9
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 5.5e-25 119.8 179 40.8
Lj1E995T0 Lonicera japonica HOM05D006594 ORTHO05D008383 2.6e-22 110.9 134 47.0
unitig_0.g462 Utricularia gibba HOM05D006594 ORTHO05D008383 4.4e-22 110.2 140 47.1
Atru.chr1.484 Acer truncatum HOM05D006594 ORTHO05D008383 9.7e-22 109.0 110 58.2
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea HOM05D006594 ORTHO05D008383 1.3e-21 108.6 279 30.5
Duzib068G0509 Durio zibethinus HOM05D006594 ORTHO05D008383 7.7e-19 99.4 176 37.5
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 7.2e-17 92.8 96 53.1
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 4.7e-16 90.1 120 40.8
EL10Ac3g05712 Beta vulgaris HOM05D006594 ORTHO05D008383 1.2e-11 75.5 110 44.5
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 3.0e-07 60.8 124 26.6


User provided reference genes

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