Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g14340 Schrenkiella parvula HOM05D001338 ORTHO05D001239 7.1e-69 263.8 136 100.0
SpUn0060_0030 Schrenkiella parvula HOM05D001338 ORTHO05D001239 1.6e-44 183.0 296 43.6
Thhalv10001096m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.1e-18 97.1 86 60.5
Thhalv10016048m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.5e-18 96.7 128 47.7
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 3.3e-18 95.5 61 78.7
MD01G1087700 Malus domestica HOM05D001113 ORTHO05D000968 7.4e-18 94.4 179 33.5
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 8.2e-17 90.9 128 44.5
BolC1t04570H Brassica oleracea HOM05D000012 ORTHO05D001652 1.4e-16 90.1 80 57.5
Oeu006251.1 Olea europaea HOM05D001338 ORTHO05D001239 1.8e-16 89.7 258 26.7
CARHR048790 Cardamine hirsuta HOM05D001338 ORTHO05D001239 6.9e-16 87.8 113 48.7
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 6.9e-16 87.8 84 54.8
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 6.9e-16 87.8 84 54.8
CSS0006650 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 4.5e-15 85.1 95 44.2
CSS0027088 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.9e-14 82.4 95 43.2
TWI18G0851 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 3.8e-14 82.0 97 42.3
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 8.5e-14 80.9 127 42.5
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 8.5e-14 80.9 163 37.4
FvH4_5g30891 Fragaria vesca HOM05D001338 ORTHO05D001239 8.5e-14 80.9 163 37.4
Glyma.14G107400 Glycine max HOM05D001338 ORTHO05D001239 8.5e-14 80.9 87 47.1
Sp6g08540 Schrenkiella parvula HOM05D001338 ORTHO05D001239 8.5e-14 80.9 59 66.1
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 8.5e-14 80.9 86 46.5
AT1G35150 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 1.9e-13 79.7 112 46.4
CSS0039736 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.9e-13 79.7 128 39.8
CiPaw.02G115100 Carya illinoinensis HOM05D001338 ORTHO05D001239 3.2e-13 79.0 87 46.0
AT2G06500 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 4.2e-13 78.6 112 45.5
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 4.2e-13 78.6 127 40.2
TWI74G1236 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 4.2e-13 78.6 82 47.6
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 5.5e-13 78.2 127 42.5
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 9.4e-13 77.4 107 41.1
CARHR289900 Cardamine hirsuta HOM05D001338 ORTHO05D001239 1.2e-12 77.0 61 60.7
Zm00001eb237490 Zea mays HOM05D001338 ORTHO05D001239 1.2e-12 77.0 83 49.4
CSS0011720 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.6e-12 76.6 128 39.1
TWI81G1066 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.6e-12 76.6 116 37.9
BcaB06g28244 Brassica carinata HOM05D001338 ORTHO05D001239 2.1e-12 76.3 60 65.0
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 2.1e-12 76.3 113 39.8
PSO801G0680 Papaver somniferum HOM05D001338 ORTHO05D001239 2.1e-12 76.3 113 39.8
Oeu012605.1 Olea europaea HOM05D001338 ORTHO05D001239 2.7e-12 75.9 118 36.4
PSO724G1135 Papaver somniferum HOM05D001338 ORTHO05D001239 2.7e-12 75.9 83 44.6
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 2.7e-12 75.9 110 40.9
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 3.6e-12 75.5 124 37.9
CARHR149350 Cardamine hirsuta HOM05D001338 ORTHO05D001239 3.6e-12 75.5 60 63.3
PSO541G1638 Papaver somniferum HOM05D001338 ORTHO05D001239 3.6e-12 75.5 86 44.2
Zm00001eb426040 Zea mays HOM05D001338 ORTHO05D001239 3.6e-12 75.5 127 37.0
CANSAT54G1041 Cannabis sativa HOM05D001338 ORTHO05D001239 6.1e-12 74.7 128 37.5
CANSAT35G0728 Cannabis sativa HOM05D001338 ORTHO05D001239 7.9e-12 74.3 124 37.9
RcHm_v2.0_Chr1g0320361 Rosa chinensis HOM05D001338 ORTHO05D001239 7.9e-12 74.3 128 37.5
AUR62037832 Chenopodium quinoa HOM05D001338 ORTHO05D001239 1.0e-11 73.9 83 47.0
Glyma.18G183000 Glycine max HOM05D001338 ORTHO05D001239 1.0e-11 73.9 84 44.0
PSO210G1522 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-11 73.9 112 37.5
PSO384G2104 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-11 73.9 83 45.8
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 1.8e-11 73.2 112 37.5
PSO339G3643 Papaver somniferum HOM05D001338 ORTHO05D001239 1.8e-11 73.2 83 42.2
Oeu064240.1 Olea europaea HOM05D001338 ORTHO05D001239 2.3e-11 72.8 84 45.2
Sp4g06670 Schrenkiella parvula HOM05D001338 ORTHO05D001239 2.3e-11 72.8 60 58.3
CARHR217460 Cardamine hirsuta HOM05D001338 ORTHO05D001239 3.0e-11 72.4 59 59.3
TWI74G0662 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 3.0e-11 72.4 56 58.9
PSO063G3812 Papaver somniferum HOM05D001338 ORTHO05D001239 3.9e-11 72.0 125 39.2
PSO063G5018 Papaver somniferum HOM05D001338 ORTHO05D001239 3.9e-11 72.0 83 42.2
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 3.9e-11 72.0 83 42.2
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 3.9e-11 72.0 83 42.2
Oeu029248.1 Olea europaea HOM05D001338 ORTHO05D001239 6.7e-11 71.2 102 40.2
PSO210G4276 Papaver somniferum HOM05D001338 ORTHO05D001239 6.7e-11 71.2 113 38.9
SpUn0007_0210 Schrenkiella parvula HOM05D001338 ORTHO05D001239 8.8e-11 70.9 100 45.0
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.5e-10 70.1 56 55.4
AT3G29794 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 2.0e-10 69.7 71 47.9
CSS0005716 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.0e-10 69.7 92 40.2
AT2G16040 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 2.6e-10 69.3 60 56.7
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 2.6e-10 69.3 106 36.8
PSO541G2431 Papaver somniferum HOM05D001338 ORTHO05D001239 3.3e-10 68.9 112 35.7
PSO421G0097 Papaver somniferum HOM05D001338 ORTHO05D001239 4.4e-10 68.6 86 38.4
PSO675G4854 Papaver somniferum HOM05D001338 ORTHO05D001239 7.4e-10 67.8 196 26.5
Oeu063541.1 Olea europaea HOM05D001338 ORTHO05D001239 9.7e-10 67.4 74 44.6
TWI18G1324 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 9.7e-10 67.4 61 52.5
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.3e-09 67.0 115 37.4
Sp3g26050 Schrenkiella parvula HOM05D001338 ORTHO05D001239 1.7e-09 66.6 54 55.6
CSS0006616 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.2e-09 66.2 57 56.1
CSS0047876 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.2e-09 66.2 57 56.1
CANSAT80G1592 Cannabis sativa HOM05D001338 ORTHO05D001239 2.2e-09 66.2 128 33.6
Oeu028129.1 Olea europaea HOM05D001338 ORTHO05D001239 2.2e-09 66.2 108 37.0
Oeu054866.1 Olea europaea HOM05D001338 ORTHO05D001239 2.2e-09 66.2 128 34.4
PSO210G5802 Papaver somniferum HOM05D001338 ORTHO05D001239 2.2e-09 66.2 127 40.2
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.2e-09 66.2 56 51.8
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 2.8e-09 65.9 62 56.5
Atru.chr2.1436 Acer truncatum HOM05D001338 ORTHO05D001239 3.7e-09 65.5 86 41.9
CSS0023742 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.7e-09 65.5 57 56.1
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 3.7e-09 65.5 127 33.1
PSO063G1472 Papaver somniferum HOM05D001338 ORTHO05D001239 3.7e-09 65.5 113 36.3
Atru.chr5.2972 Acer truncatum HOM05D000003 ORTHO05D002259 4.8e-09 65.1 84 41.7
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 4.8e-09 65.1 125 34.4
PSO478G3958 Papaver somniferum HOM05D001338 ORTHO05D001239 4.8e-09 65.1 64 53.1
Sp1g30600 Schrenkiella parvula HOM05D001338 ORTHO05D001239 4.8e-09 65.1 49 71.4
Atru.chr1.2432 Acer truncatum HOM05D001338 ORTHO05D001239 6.3e-09 64.7 86 40.7
FvH4_2g29241 Fragaria vesca HOM05D001338 ORTHO05D001239 6.3e-09 64.7 62 51.6
CSS0007608 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 8.2e-09 64.3 57 54.4
Oeu016868.1 Olea europaea HOM05D001338 ORTHO05D001239 8.2e-09 64.3 128 33.6
Oeu035174.1 Olea europaea HOM05D001338 ORTHO05D001239 8.2e-09 64.3 61 49.2
RcHm_v2.0_Chr6g0288531 Rosa chinensis HOM05D001338 ORTHO05D001239 8.2e-09 64.3 62 50.0
CAN.G464.34 Capsicum annuum HOM05D001338 ORTHO05D001239 1.1e-08 63.9 64 48.4
FvH4_6g47641 Fragaria vesca HOM05D001338 ORTHO05D001239 1.1e-08 63.9 62 51.6
Oeu011673.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-08 63.9 128 33.6
Oeu018627.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-08 63.9 61 49.2
Oeu046624.1 Olea europaea HOM05D001338 ORTHO05D001239 1.1e-08 63.9 61 49.2
CSS0026998 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.4e-08 63.5 56 55.4
Oeu008700.1 Olea europaea HOM05D001338 ORTHO05D001239 1.4e-08 63.5 108 35.2
PSO761G0174 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-08 63.5 62 48.4
CANSAT01G1407 Cannabis sativa HOM05D001338 ORTHO05D001239 1.8e-08 63.2 64 48.4
CANSAT21G0346 Cannabis sativa HOM05D001338 ORTHO05D001239 1.8e-08 63.2 64 48.4
CANSAT80G1687 Cannabis sativa HOM05D001338 ORTHO05D001239 1.8e-08 63.2 64 48.4
Gohir.D06G166250 Gossypium hirsutum HOM05D001338 ORTHO05D001239 1.8e-08 63.2 120 35.0
Oeu030195.1 Olea europaea HOM05D001338 ORTHO05D001239 1.8e-08 63.2 108 35.2
Oeu052557.1 Olea europaea HOM05D001338 ORTHO05D001239 1.8e-08 63.2 108 35.2
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 2.4e-08 62.8 62 53.2
Oeu039597.1 Olea europaea HOM05D001338 ORTHO05D001239 2.4e-08 62.8 128 33.6
CSS0016533 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.1e-08 62.4 125 36.0
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 3.1e-08 62.4 127 35.4
Zm00001eb077850 Zea mays HOM05D001338 ORTHO05D001239 3.1e-08 62.4 108 38.0
CANSAT56G4418 Cannabis sativa HOM05D001338 ORTHO05D001239 4.1e-08 62.0 117 33.3
CANSAT64G2348 Cannabis sativa HOM05D001338 ORTHO05D001239 4.1e-08 62.0 117 33.3
FvH4_2g18762 Fragaria vesca HOM05D001338 ORTHO05D001239 4.1e-08 62.0 57 50.9
Oeu012177.1 Olea europaea HOM05D001338 ORTHO05D001239 4.1e-08 62.0 128 33.6
CANSAT35G0841 Cannabis sativa HOM05D001338 ORTHO05D001239 5.3e-08 61.6 64 48.4
CARHR217440 Cardamine hirsuta HOM05D001338 ORTHO05D001239 5.3e-08 61.6 91 38.5
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 5.3e-08 61.6 127 33.1
TPR.G17453 Trifolium pratense HOM05D001338 ORTHO05D001239 7.0e-08 61.2 124 33.9
CSS0012104 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 9.1e-08 60.8 61 49.2
CSS0034678 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 9.1e-08 60.8 125 35.2
CANSAT21G1695 Cannabis sativa HOM05D001338 ORTHO05D001239 9.1e-08 60.8 57 50.9
CSS0029771 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.2e-07 60.5 125 36.0
Oeu042321.2 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-07 60.5 108 34.3
PSO170G2214 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-07 60.5 108 36.1
PSO478G1760 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-07 60.5 108 36.1
PSO478G4662 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-07 60.5 108 36.1
PSO781G0133 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-07 60.5 108 36.1
Aqoxy7G02176 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 1.5e-07 60.1 61 49.2
CARHR252010 Cardamine hirsuta HOM05D001338 ORTHO05D001239 1.5e-07 60.1 127 35.4
PSO144G0149 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-07 60.1 87 39.1
CANSAT80G1793 Cannabis sativa HOM05D001338 ORTHO05D001239 2.0e-07 59.7 117 32.5
PSO170G3462 Papaver somniferum HOM05D001338 ORTHO05D001239 2.0e-07 59.7 68 44.1
CANSAT11G2147 Cannabis sativa HOM05D001338 ORTHO05D001239 2.6e-07 59.3 117 32.5
Oeu023192.1 Olea europaea HOM05D001338 ORTHO05D001239 2.6e-07 59.3 62 48.4
Oeu063768.1 Olea europaea HOM05D001338 ORTHO05D001239 2.6e-07 59.3 144 33.3
PSO063G6596 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-07 58.9 64 45.3
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-07 58.9 82 40.2
PSO478G0891 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-07 58.9 128 34.4
PSO541G2490 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-07 58.9 128 34.4
PSO764G0071 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-07 58.9 108 35.2
CSS0004687 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 4.5e-07 58.5 61 45.9
Glyma.12G093566 Glycine max HOM05D001338 ORTHO05D001239 4.5e-07 58.5 55 49.1
PSO063G6488 Papaver somniferum HOM05D001338 ORTHO05D001239 4.5e-07 58.5 57 49.1
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 4.5e-07 58.5 128 34.4
PSO144G0154 Papaver somniferum HOM05D001338 ORTHO05D001239 4.5e-07 58.5 57 49.1
PSO339G5336 Papaver somniferum HOM05D001338 ORTHO05D001239 4.5e-07 58.5 57 47.4
PSO832G0537 Papaver somniferum HOM05D001338 ORTHO05D001239 4.5e-07 58.5 57 49.1
RcHm_v2.0_Chr2g0139651 Rosa chinensis HOM05D001338 ORTHO05D001239 4.5e-07 58.5 60 43.3
PSO135G0743 Papaver somniferum HOM05D001338 ORTHO05D001239 5.9e-07 58.2 57 49.1
PSO210G1168 Papaver somniferum HOM05D001338 ORTHO05D001239 5.9e-07 58.2 57 49.1
PSO724G0816 Papaver somniferum HOM05D001338 ORTHO05D001239 5.9e-07 58.2 57 49.1
CANSAT21G1775 Cannabis sativa HOM05D001338 ORTHO05D001239 7.7e-07 57.8 62 50.0
Oeu056375.1 Olea europaea HOM05D001338 ORTHO05D001239 7.7e-07 57.8 126 31.7
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 7.7e-07 57.8 106 34.9
Sp3g27040 Schrenkiella parvula HOM05D001338 ORTHO05D001239 7.7e-07 57.8 54 51.9
CSS0025100 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.0e-06 57.4 125 34.4
CANSAT46G0003 Cannabis sativa HOM05D001338 ORTHO05D001239 1.0e-06 57.4 62 43.5
PSO210G1253 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-06 57.4 63 44.4
PSO801G0833 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-06 57.4 112 36.6
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-06 57.0 108 34.3
Zm00001eb395890 Zea mays HOM05D001338 ORTHO05D001239 1.3e-06 57.0 69 44.9
ECA232G0049 Erigeron canadensis HOM05D001338 ORTHO05D001239 1.7e-06 56.6 50 52.0
FvH4_2g32571 Fragaria vesca HOM05D001338 ORTHO05D001239 2.2e-06 56.2 62 43.5
Oeu029413.1 Olea europaea HOM05D001338 ORTHO05D001239 2.2e-06 56.2 65 50.8
Oeu033602.1 Olea europaea HOM05D001338 ORTHO05D001239 2.2e-06 56.2 88 43.2
PSO478G0790 Papaver somniferum HOM05D001338 ORTHO05D001239 2.9e-06 55.8 87 36.8
Oeu011870.1 Olea europaea HOM05D001338 ORTHO05D001239 3.8e-06 55.5 92 41.3
PSO386G0185 Papaver somniferum HOM05D001338 ORTHO05D001239 6.5e-06 54.7 128 34.4
TPR.G25675 Trifolium pratense HOM05D000006 ORTHO05D000001 6.5e-06 54.7 138 33.3
PSO017G2034 Papaver somniferum HOM05D001338 ORTHO05D001239 8.5e-06 54.3 54 44.4
PSO170G3017 Papaver somniferum HOM05D001338 ORTHO05D001239 8.5e-06 54.3 57 45.6


User provided reference genes

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