Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g13930 Schrenkiella parvula HOM05D000678 ORTHO05D002523 1.6e-60 236.5 182 100.0
Sp6g33760 Schrenkiella parvula HOM05D000678 ORTHO05D002523 2.7e-55 219.2 117 94.9
Thhalv10013332m.g Eutrema salsugineum HOM05D000678 ORTHO05D002523 8.1e-44 181.0 119 82.4
AT5G09620 Arabidopsis thaliana HOM05D000678 ORTHO05D002523 7.5e-42 174.5 120 76.7
CARHR203760 Cardamine hirsuta HOM05D000678 ORTHO05D002523 7.1e-40 167.9 119 72.3
AL6G20040 Arabidopsis lyrata HOM05D000678 ORTHO05D002523 1.0e-38 164.1 118 72.9
THA.LOC104799711 Tarenaya hassleriana HOM05D000678 ORTHO05D002523 1.1e-35 154.1 123 67.5
Aa31LG3G17440 Aethionema arabicum HOM05D000678 ORTHO05D002523 7.6e-34 147.9 121 66.1
Carub.0003s2763 Capsella rubella HOM05D000678 ORTHO05D002523 4.6e-31 138.7 121 66.1
BcaB08g37195 Brassica carinata HOM05D000678 ORTHO05D002523 2.3e-30 136.3 120 70.0
C09p67850 Brassica napus HOM05D000678 ORTHO05D002523 2.3e-30 136.3 120 70.0
BolC9t59545H Brassica oleracea HOM05D000678 ORTHO05D002523 2.3e-30 136.3 120 70.0
Sp2g27520 Schrenkiella parvula HOM05D000678 ORTHO05D002523 3.0e-30 136.0 123 61.0
A10p27740 Brassica napus HOM05D000678 ORTHO05D002523 1.1e-27 127.5 123 68.3
AL8G41800 Arabidopsis lyrata HOM05D000678 ORTHO05D002523 1.4e-27 127.1 123 58.5
Thhalv10004027m.g Eutrema salsugineum HOM05D000678 ORTHO05D002523 1.4e-27 127.1 131 61.8
BraA10t44825Z Brassica rapa HOM05D000678 ORTHO05D002523 4.0e-27 125.6 123 67.5
AT5G64430 Arabidopsis thaliana HOM05D000678 ORTHO05D002523 1.2e-26 124.0 123 59.3
THA.LOC104818530 Tarenaya hassleriana HOM05D000678 ORTHO05D002523 1.3e-25 120.6 123 58.5
Carub.0008s2523 Capsella rubella HOM05D000678 ORTHO05D002523 1.4e-24 117.1 123 55.3
Aa31LG1G17470 Aethionema arabicum HOM05D000678 ORTHO05D002523 1.0e-22 110.9 125 53.6
BraA06t26052Z Brassica rapa HOM05D000678 ORTHO05D002523 3.1e-19 99.4 98 59.2
A06p31090 Brassica napus HOM05D000678 ORTHO05D002523 2.6e-18 96.3 95 58.9
C03p61850 Brassica napus HOM05D000678 ORTHO05D002523 2.6e-18 96.3 99 60.6
BolC3t18445H Brassica oleracea HOM05D000678 ORTHO05D002523 2.6e-18 96.3 99 60.6
Duzib132G0018 Durio zibethinus HOM05D000678 ORTHO05D002523 1.3e-17 94.0 123 49.6
Cpa.g.sc20.43 Carica papaya HOM05D000678 ORTHO05D002523 2.9e-17 92.8 134 47.0
BcaC03g18263 Brassica carinata HOM05D000678 ORTHO05D002523 1.2e-15 87.4 123 48.8
C02p63370 Brassica napus HOM05D000678 ORTHO05D002523 1.2e-15 87.4 123 48.8
BolC2t12405H Brassica oleracea HOM05D000678 ORTHO05D002523 1.2e-15 87.4 123 48.8
BraA02t09257Z Brassica rapa HOM05D000678 ORTHO05D002523 2.1e-15 86.7 123 47.2
A02p43310 Brassica napus HOM05D000678 ORTHO05D002523 6.0e-15 85.1 123 50.4
Gohir.A03G179000 Gossypium hirsutum HOM05D000678 ORTHO05D002523 1.3e-14 84.0 119 47.1
Thecc.02G124700 Theobroma cacao HOM05D000678 ORTHO05D002523 1.8e-14 83.6 123 47.2
TWI59G0244 Tripterygium wilfordii HOM05D000678 ORTHO05D002523 8.7e-14 81.3 128 48.4
Gohir.D02G202700 Gossypium hirsutum HOM05D000678 ORTHO05D002523 1.9e-13 80.1 119 46.2
Gorai.005G227800 Gossypium raimondii HOM05D000678 ORTHO05D002523 2.5e-13 79.7 119 45.4
Duzib248G0657 Durio zibethinus HOM05D000678 ORTHO05D002523 9.6e-13 77.8 121 43.8
Gorai.012G145600 Gossypium raimondii HOM05D000678 ORTHO05D002523 1.3e-12 77.4 124 44.4
TWI23G0011 Tripterygium wilfordii HOM05D000678 ORTHO05D002523 1.6e-12 77.0 126 43.7
CARHR278400 Cardamine hirsuta HOM05D000678 ORTHO05D002523 3.1e-11 72.8 79 57.0
Gohir.A04G116500 Gossypium hirsutum HOM05D000678 ORTHO05D002523 4.0e-11 72.4 120 40.0
Ciclev10030306m.g Citrus clementina HOM05D000678 ORTHO05D002523 6.9e-11 71.6 124 46.8
Actinidia02413 Actinidia chinensis HOM05D000678 ORTHO05D002523 9.0e-11 71.2 128 42.2
THA.LOC104807191 Tarenaya hassleriana HOM05D000678 ORTHO05D002523 1.2e-10 70.9 130 40.0
BcaB07g29743 Brassica carinata HOM05D000678 ORTHO05D002523 2.2e-09 66.6 123 43.1
Sed0002041 Sechium edule HOM05D000678 ORTHO05D002523 2.2e-09 66.6 128 43.0
Atru.chr6.1362 Acer truncatum HOM05D000678 ORTHO05D002523 6.4e-09 65.1 130 40.8
QL11p026666 Quercus lobata HOM05D000678 ORTHO05D002523 2.4e-08 63.2 122 41.0
Glyma.07G184400 Glycine max HOM05D000678 ORTHO05D002523 7.1e-08 61.6 126 38.1
Dinv08964 Davidia involucrata HOM05D000678 ORTHO05D002523 9.3e-08 61.2 128 43.0
ClCG09G016430 Citrullus lanatus HOM05D000678 ORTHO05D002523 1.2e-07 60.8 126 37.3
Cfa004801 Carpinus fangiana HOM05D000678 ORTHO05D002523 2.7e-07 59.7 131 35.9
Solyc04g076820.1 Solanum lycopersicum HOM05D000678 ORTHO05D002523 2.7e-07 59.7 143 38.5
PGR142G2771 Punica granatum HOM05D000678 ORTHO05D002523 4.6e-07 58.9 123 39.0
Eucgr.I02580 Eucalyptus grandis HOM05D000678 ORTHO05D002523 6.0e-07 58.5 119 37.8
Haze_10393 Corylus avellana HOM05D000678 ORTHO05D002523 7.9e-07 58.2 133 34.6
Dinv16036 Davidia involucrata HOM05D000678 ORTHO05D002523 7.9e-07 58.2 125 38.4
Manes.07G046900 Manihot esculenta HOM05D000678 ORTHO05D002523 3.9e-06 55.8 126 42.9
Potri.009G080200 Populus trichocarpa HOM05D000678 ORTHO05D002523 6.7e-06 55.1 122 37.7
vmacro21365 Vaccinium macrocarpon HOM05D000678 ORTHO05D002523 8.7e-06 54.7 135 39.3


User provided reference genes

Program Settings