Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 1.8e-58 229.2 124 100.0
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 1.3e-53 213.0 129 89.9
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 6.5e-53 210.7 124 91.1
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 4.2e-52 208.0 129 87.6
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 2.7e-51 205.3 124 90.3
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 4.6e-51 204.5 124 89.5
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 4.6e-51 204.5 124 89.5
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 3.9e-50 201.4 129 85.3
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 9.7e-49 196.8 172 68.6
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 6.9e-47 190.7 137 79.6
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 6.9e-47 190.7 128 82.0
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 9.0e-47 190.3 128 81.2
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 1.5e-46 189.5 128 81.2
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 2.0e-46 189.1 128 81.2
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 4.5e-46 188.0 129 80.6
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 4.5e-46 188.0 131 78.6
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 7.7e-46 187.2 123 82.9
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.3e-45 186.4 129 79.1
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 1.3e-45 186.4 128 78.9
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.2e-45 185.7 128 78.1
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.2e-45 185.7 128 78.1
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 2.9e-45 185.3 129 79.1
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 3.8e-45 184.9 129 79.1
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 3.8e-45 184.9 128 78.1
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 3.8e-45 184.9 128 77.3
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 5.0e-45 184.5 128 78.9
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 6.5e-45 184.1 128 77.3
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.1e-44 183.3 130 76.2
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 1.1e-44 183.3 129 78.3
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 1.4e-44 183.0 129 78.3
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.9e-44 182.6 129 78.3
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.9e-44 182.6 128 78.9
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 2.5e-44 182.2 128 78.1
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 5.5e-44 181.0 128 76.6
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 5.5e-44 181.0 129 77.5
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 5.5e-44 181.0 129 77.5
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 5.5e-44 181.0 128 77.3
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 7.2e-44 180.6 128 76.6
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 7.2e-44 180.6 128 76.6
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 1.2e-43 179.9 129 76.7
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.6e-43 179.5 122 79.5
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.6e-43 179.5 128 77.3
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 3.6e-43 178.3 128 75.0
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 4.6e-43 177.9 128 76.6
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 4.6e-43 177.9 129 75.2
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 4.6e-43 177.9 128 75.8
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 6.1e-43 177.6 129 76.7
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 1.0e-42 176.8 129 74.4
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 1.0e-42 176.8 128 75.8
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 1.8e-42 176.0 128 75.0
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 1.8e-42 176.0 126 76.2
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 1.8e-42 176.0 126 76.2
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 2.3e-42 175.6 128 74.2
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 3.0e-42 175.3 128 74.2
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 3.9e-42 174.9 128 74.2
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 5.1e-42 174.5 128 74.2
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 5.1e-42 174.5 128 74.2
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 5.1e-42 174.5 128 75.0
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 6.7e-42 174.1 129 73.6
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 6.7e-42 174.1 128 71.1
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 8.8e-42 173.7 127 73.2
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 1.5e-41 172.9 128 73.4
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 1.5e-41 172.9 128 74.2
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 2.0e-41 172.6 127 74.8
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.5e-41 172.2 135 73.3
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 2.5e-41 172.2 129 73.6
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 3.3e-41 171.8 115 79.1
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 4.3e-41 171.4 128 73.4
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 7.4e-41 170.6 128 71.1
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 2.2e-40 169.1 128 71.1
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.8e-40 168.7 127 70.9
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 3.7e-40 168.3 125 73.6
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 3.7e-40 168.3 128 70.3
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.1e-39 166.8 127 70.9
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 1.1e-39 166.8 113 81.4
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 1.4e-39 166.4 128 69.5
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 1.8e-39 166.0 128 69.5
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 2.4e-39 165.6 119 76.5
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 2.4e-39 165.6 128 69.5
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 5.3e-39 164.5 126 70.6
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 9.1e-39 163.7 128 69.5
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 9.1e-39 163.7 128 69.5
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 9.1e-39 163.7 121 75.2
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 1.2e-38 163.3 99 89.9
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 1.2e-38 163.3 124 74.2
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 2.6e-38 162.2 129 69.0
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 3.4e-38 161.8 126 69.0
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 4.5e-38 161.4 125 73.6
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 4.5e-38 161.4 129 68.2
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.0e-37 160.2 129 67.4
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.7e-37 159.5 127 70.1
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 2.9e-37 158.7 119 73.9
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 1.4e-36 156.4 129 65.9
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 7.9e-35 150.6 121 67.8
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 7.9e-35 150.6 116 73.3
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 1.4e-34 149.8 89 88.8
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 6.7e-34 147.5 87 89.7
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 5.7e-33 144.4 186 52.2
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 7.4e-33 144.1 104 78.8
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 1.7e-32 142.9 96 80.2
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 4.8e-32 141.4 92 84.8
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 1.4e-31 139.8 93 82.8
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 3.8e-29 131.7 128 57.0
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 8.5e-29 130.6 104 68.3
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.5e-28 129.0 104 70.2
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 5.5e-28 127.9 128 55.5
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.3e-26 122.5 96 70.8
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 9.7e-25 117.1 92 71.7
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 3.7e-24 115.2 119 52.9
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 7.0e-23 110.9 59 94.9
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 1.0e-21 107.1 59 91.5
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 3.8e-21 105.1 65 86.2
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 1.9e-20 102.8 66 86.4
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 7.2e-20 100.9 101 57.4
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 2.7e-19 99.0 99 52.5
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.0e-17 92.8 72 69.4
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 7.5e-17 90.9 59 76.3
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 1.7e-16 89.7 59 72.9
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 8.3e-16 87.4 66 75.8
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 1.0e-13 80.5 53 83.0
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 8.5e-13 77.4 64 60.9
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 2.0e-09 66.2 117 34.2
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 8.3e-08 60.8 38 78.9
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 2.4e-07 59.3 41 70.7
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 1.6e-06 56.6 65 43.1


User provided reference genes

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