Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g13590 Schrenkiella parvula HOM05D004547 ORTHO05D005133 0.0e+00 1588.5 837 100.0
Carub.0008s1145 Capsella rubella HOM05D004547 ORTHO05D005133 0.0e+00 1533.1 837 95.8
AL8G25720 Arabidopsis lyrata HOM05D004547 ORTHO05D005133 0.0e+00 1530.8 837 95.8
CARHR264160 Cardamine hirsuta HOM05D004547 ORTHO05D005133 0.0e+00 1530.8 837 95.8
Thhalv10012691m.g Eutrema salsugineum HOM05D004547 ORTHO05D005133 0.0e+00 1530.8 837 96.3
BcaB08g35501 Brassica carinata HOM05D004547 ORTHO05D005133 0.0e+00 1528.8 837 95.9
AT5G51430 Arabidopsis thaliana HOM05D004547 ORTHO05D005133 0.0e+00 1527.7 837 95.9
C02p20480 Brassica napus HOM05D004547 ORTHO05D005133 0.0e+00 1512.7 837 95.1
A02p12350 Brassica napus HOM05D004547 ORTHO05D005133 0.0e+00 1506.1 838 95.0
BcaC04g20676 Brassica carinata HOM05D004547 ORTHO05D005133 0.0e+00 1502.3 837 94.6
BraA10t43010Z Brassica rapa HOM05D004547 ORTHO05D005133 0.0e+00 1498.8 839 94.6
BolC9t56951H Brassica oleracea HOM05D004547 ORTHO05D005133 0.0e+00 1498.0 838 94.5
C09p40720 Brassica napus HOM05D004547 ORTHO05D005133 0.0e+00 1497.6 838 94.5
A10p09340 Brassica napus HOM05D004547 ORTHO05D005133 0.0e+00 1494.9 839 94.6
Aa31sc202G10 Aethionema arabicum HOM05D004547 ORTHO05D005133 0.0e+00 1477.2 837 92.2
THA.LOC104811522 Tarenaya hassleriana HOM05D004547 ORTHO05D005133 0.0e+00 1451.4 838 89.5
Cpa.g.sc3.324 Carica papaya HOM05D004547 ORTHO05D005133 0.0e+00 1306.2 841 79.8
QL09p005748 Quercus lobata HOM05D004547 ORTHO05D005133 0.0e+00 1305.8 838 80.8
Thecc.03G155600 Theobroma cacao HOM05D004547 ORTHO05D005133 0.0e+00 1300.0 837 80.0
CiPaw.03G093300 Carya illinoinensis HOM05D004547 ORTHO05D005133 0.0e+00 1297.7 841 79.4
Duzib205G1908 Durio zibethinus HOM05D004547 ORTHO05D005133 0.0e+00 1295.8 837 79.8
Dinv28576 Davidia involucrata HOM05D004547 ORTHO05D005133 0.0e+00 1295.0 840 79.0
Manes.06G134600 Manihot esculenta HOM05D004547 ORTHO05D005133 0.0e+00 1286.9 841 79.4
Ciclev10004313m.g Citrus clementina HOM05D004547 ORTHO05D005133 0.0e+00 1283.9 840 78.6
Atru.chr1.728 Acer truncatum HOM05D004547 ORTHO05D005133 0.0e+00 1279.6 840 78.7
CSS0028755 Camellia sinensis var. sinensis HOM05D004547 ORTHO05D005133 0.0e+00 1278.8 840 78.0
Prupe.2G277000 Prunus persica HOM05D004547 ORTHO05D005133 0.0e+00 1278.8 841 78.4
Cfa008167 Carpinus fangiana HOM05D004547 ORTHO05D005133 0.0e+00 1276.2 840 78.9
Eucgr.A02893 Eucalyptus grandis HOM05D004547 ORTHO05D005133 0.0e+00 1275.0 841 78.1
Actinidia31780 Actinidia chinensis HOM05D004547 ORTHO05D005133 0.0e+00 1274.6 840 77.3
Hma1.2p1_0432F.1_g151760 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 0.0e+00 1274.6 839 77.2
PGR042G2008 Punica granatum HOM05D004547 ORTHO05D005133 0.0e+00 1272.7 841 78.2
Potri.003G109100 Populus trichocarpa HOM05D004547 ORTHO05D005133 0.0e+00 1272.3 840 78.3
Gorai.008G216000 Gossypium raimondii HOM05D004547 ORTHO05D005133 0.0e+00 1270.0 838 79.0
CANSAT56G3837 Cannabis sativa HOM05D004547 ORTHO05D005133 0.0e+00 1269.2 841 78.6
RcHm_v2.0_Chr1g0374281 Rosa chinensis HOM05D004547 ORTHO05D005133 0.0e+00 1267.7 841 77.9
Gohir.D12G200900 Gossypium hirsutum HOM05D004547 ORTHO05D005133 0.0e+00 1267.3 838 78.9
FvH4_7g27490 Fragaria vesca HOM05D004547 ORTHO05D005133 0.0e+00 1262.7 841 77.4
FAN03G1184 Fragaria x ananassa HOM05D004547 ORTHO05D005133 0.0e+00 1262.7 841 77.3
Gohir.A12G198300 Gossypium hirsutum HOM05D004547 ORTHO05D005133 0.0e+00 1261.1 838 78.3
GSVIVG01018659001 Vitis vinifera HOM05D004547 ORTHO05D005133 0.0e+00 1260.7 841 77.3
Sed0001089 Sechium edule HOM05D004547 ORTHO05D005133 0.0e+00 1259.2 838 76.8
TAR375G0699 Trochodendron aralioides HOM05D004547 ORTHO05D005133 0.0e+00 1257.3 840 77.0
CsaV3_3G016130 Cucumis sativus L. HOM05D004547 ORTHO05D005133 0.0e+00 1256.5 838 77.3
FAN01G0567 Fragaria x ananassa HOM05D004547 ORTHO05D005133 0.0e+00 1256.1 841 77.1
MELO3C006811.2 Cucumis melo HOM05D004547 ORTHO05D005133 0.0e+00 1255.0 838 77.1
Glyma.09G224000 Glycine max HOM05D004547 ORTHO05D005133 0.0e+00 1244.2 838 77.1
FAN06G1879 Fragaria x ananassa HOM05D004547 ORTHO05D005133 0.0e+00 1243.8 861 75.4
Lj3g0004511 Lotus japonicus HOM05D004547 ORTHO05D005133 0.0e+00 1241.5 837 76.7
Sed0008837 Sechium edule HOM05D004547 ORTHO05D005133 0.0e+00 1241.5 838 76.8
Glyma.12G013000 Glycine max HOM05D004547 ORTHO05D005133 0.0e+00 1240.7 837 76.7
ClCG05G007360 Citrullus lanatus HOM05D004547 ORTHO05D005133 0.0e+00 1239.9 831 77.3
Rhsim03G0167200 Rhododendron simsii HOM05D004547 ORTHO05D005133 0.0e+00 1238.8 841 76.1
Phvul.011G016000 Phaseolus vulgaris HOM05D004547 ORTHO05D005133 0.0e+00 1232.6 837 76.2
Lj1A979T84 Lonicera japonica HOM05D004547 ORTHO05D005133 0.0e+00 1231.9 840 76.0
VMungo1127G1242 Vigna mungo HOM05D004547 ORTHO05D005133 0.0e+00 1231.1 837 76.2
arahy.Tifrunner.gnm1.ann1.TL2CDN Arachis hypogaea HOM05D004547 ORTHO05D005133 0.0e+00 1230.7 837 76.6
arahy.Tifrunner.gnm1.ann1.J7T2TK Arachis hypogaea HOM05D004547 ORTHO05D005133 0.0e+00 1229.2 837 76.5
Cc02_g04280 Coffea canephora HOM05D004547 ORTHO05D005133 0.0e+00 1228.8 848 74.9
Ca_19628_v3 Cicer arietinum L. HOM05D004547 ORTHO05D005133 0.0e+00 1223.4 838 75.8
Medtr0004s0490 Medicago truncatula HOM05D004547 ORTHO05D005133 0.0e+00 1221.8 837 75.6
Nn1g01023 Nelumbo nucifera HOM05D004547 ORTHO05D005133 0.0e+00 1221.1 840 74.9
Sabra03G0075600 Salix brachista HOM05D004547 ORTHO05D005133 0.0e+00 1220.3 933 70.2
EL10Ac2g04890 Beta vulgaris HOM05D004547 ORTHO05D005133 0.0e+00 1212.2 843 74.5
Lalb_Chr03g0024271 Lupinus albus HOM05D004547 ORTHO05D005133 0.0e+00 1211.4 837 75.9
Oeu022486.1 Olea europaea HOM05D004547 ORTHO05D005133 0.0e+00 1208.0 841 73.5
TWI39G0203 Tripterygium wilfordii HOM05D004547 ORTHO05D005133 0.0e+00 1206.4 840 75.0
Aqoxy2G03231 Aquilegia oxysepala HOM05D004547 ORTHO05D005133 0.0e+00 1199.1 842 73.6
Sopen05g002910 Solanum pennellii HOM05D004547 ORTHO05D005133 0.0e+00 1198.0 841 73.0
PGSC0003DMG400017618 Solanum tuberosum HOM05D004547 ORTHO05D005133 0.0e+00 1198.0 841 72.9
HanXRQChr16g0512771 Helianthus annuus HOM05D004547 ORTHO05D005133 0.0e+00 1197.6 837 73.8
Lsat_1_v5_gn_9_52061 Lactuca sativa HOM05D004547 ORTHO05D005133 0.0e+00 1196.8 837 74.1
Peaxi162Scf00023g01214 Petunia axillaris HOM05D004547 ORTHO05D005133 0.0e+00 1191.4 845 73.5
Sc14g0005530 Simmondsia chinensis HOM05D004547 ORTHO05D005133 0.0e+00 1190.6 837 74.0
ECA232G2122 Erigeron canadensis HOM05D004547 ORTHO05D005133 0.0e+00 1187.6 837 72.8
Migut.F00479 Erythranthe guttata HOM05D004547 ORTHO05D005133 0.0e+00 1185.6 841 73.0
PSO266G0090 Papaver somniferum HOM05D004547 ORTHO05D005133 0.0e+00 1181.8 854 72.6
PSO384G4058 Papaver somniferum HOM05D004547 ORTHO05D005133 0.0e+00 1179.9 854 72.7
Medtr6g005610 Medicago truncatula HOM05D004547 ORTHO05D005133 0.0e+00 1174.5 837 73.5
Nitab4.5_0004665g0060 Nicotiana tabacum HOM05D004547 ORTHO05D005133 0.0e+00 1173.7 842 72.2
SalBow5G1900 Salvia bowleyana HOM05D004547 ORTHO05D005133 0.0e+00 1171.4 858 71.4
MSTRG.8826 Avicennia marina HOM05D004547 ORTHO05D005133 0.0e+00 1170.6 841 71.6
SalBow5G5604 Salvia bowleyana HOM05D004547 ORTHO05D005133 0.0e+00 1170.6 858 71.3
Hund13892 Selenicereus undatus HOM05D004547 ORTHO05D005133 0.0e+00 1166.0 807 74.8
DCAR_020189 Daucus carota HOM05D004547 ORTHO05D005133 0.0e+00 1164.1 838 71.5
Ah.10g036230 Amaranthus hybridus HOM05D004547 ORTHO05D005133 0.0e+00 1159.1 840 71.4
ATR0317G078 Amborella trichopoda HOM05D004547 ORTHO05D005133 0.0e+00 1155.6 842 70.0
CAN.G16.15 Capsicum annuum HOM05D004547 ORTHO05D005133 0.0e+00 1154.0 841 70.5
AUR62022938 Chenopodium quinoa HOM05D004547 ORTHO05D005133 0.0e+00 1145.6 858 70.4
AUR62012299 Chenopodium quinoa HOM05D004547 ORTHO05D005133 0.0e+00 1136.3 840 71.1
vmacro06799 Vaccinium macrocarpon HOM05D004547 ORTHO05D005133 0.0e+00 1122.1 862 70.6
TPR.G20262 Trifolium pratense HOM05D004547 ORTHO05D005133 0.0e+00 1113.2 839 70.6
TAR374G0871 Trochodendron aralioides HOM05D004547 ORTHO05D005133 0.0e+00 1106.7 745 75.8
MD01G1182800 Malus domestica HOM05D004547 ORTHO05D005133 0.0e+00 1105.1 725 79.0
SGA_v2.0_scaffold44G16547 Striga asiatica HOM05D004547 ORTHO05D005133 0.0e+00 1092.0 1002 60.2
unitig_37.g11930 Utricularia gibba HOM05D004547 ORTHO05D005133 1.9e-305 1052.4 842 64.7
Medtr6g005670 Medicago truncatula HOM05D004547 ORTHO05D005133 2.9e-290 1001.9 836 66.0
Psat0s2825g0040 Pisum sativum HOM05D004547 ORTHO05D005133 1.8e-287 992.6 682 75.1
Zm00001eb389950 Zea mays HOM05D004547 ORTHO05D005133 8.8e-287 990.3 721 69.3
BcaC03g14608 Brassica carinata HOM05D004547 ORTHO05D005133 2.2e-282 975.7 543 94.3
CARHR150020 Cardamine hirsuta HOM05D004547 ORTHO05D005133 2.5e-273 945.7 621 82.0
Pp3c7_60 Physcomitrium patens HOM05D004547 ORTHO05D005133 2.2e-253 879.4 854 55.5
Mapoly0007s0274 Marchantia polymorpha HOM05D004547 ORTHO05D005133 1.6e-248 863.2 855 54.7
SMO134G0015 Selaginella moellendorffii HOM05D004547 ORTHO05D005133 2.6e-230 802.7 837 52.1
Hma1.2p1_0432F.1_g151750 Hydrangea macrophylla HOM05D004547 ORTHO05D005133 1.7e-229 800.0 518 77.4
AagrBONN_evm.TU.Sc2ySwM_117.1032 Anthoceros agrestis HOM05D004547 ORTHO05D005133 6.6e-218 761.5 749 55.8
Nitab4.5_0000895g0220 Nicotiana tabacum HOM05D004547 ORTHO05D005133 4.8e-216 755.4 546 71.1
HPP92_005319 Vanilla planifolia HOM05D004547 ORTHO05D005133 7.9e-211 738.0 613 63.6
FAN06G1216 Fragaria x ananassa HOM05D004547 ORTHO05D005133 6.9e-207 724.9 512 73.6
CBR_g31542 Chara braunii HOM05D004547 ORTHO05D005133 1.1e-196 691.0 901 45.5
CDE04G0004 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 2.4e-183 646.7 561 62.6
COL.COLO4_14121 Corchorus olitorius HOM05D004547 ORTHO05D005133 2.0e-182 643.7 426 80.3
MD07G1253600 Malus domestica HOM05D004547 ORTHO05D005133 5.5e-180 635.6 444 76.8
FAN10G1756 Fragaria x ananassa HOM05D004547 ORTHO05D005133 3.8e-165 586.3 441 69.2
COL.COLO4_14122 Corchorus olitorius HOM05D004547 ORTHO05D005133 1.8e-154 550.8 343 80.8
Solyc05g006950.4 Solanum lycopersicum HOM05D004547 ORTHO05D005133 3.6e-147 526.6 400 68.0
BraA02t06300Z Brassica rapa HOM05D004547 ORTHO05D005133 8.0e-147 525.4 293 95.9
HPP92_005328 Vanilla planifolia HOM05D004547 ORTHO05D005133 9.2e-143 511.9 378 70.6
CDE04G0650 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 2.3e-122 444.1 386 63.7
A10p09160 Brassica napus HOM05D004547 ORTHO05D005133 1.3e-120 438.3 235 95.3
BolC2t08183H Brassica oleracea HOM05D004547 ORTHO05D005133 1.7e-120 438.0 235 95.3
SHI14003 Sapria himalayana HOM05D004547 ORTHO05D000023 1.8e-114 417.9 341 62.5
Oeu042559.1 Olea europaea HOM05D004547 ORTHO05D005133 4.0e-106 390.2 427 53.6
Nitab4.5_0019601g0010 Nicotiana tabacum HOM05D004547 ORTHO05D005133 1.2e-97 362.1 269 69.9
PRCOL_00005609 Prasinoderma coloniale HOM05D004547 ORTHO05D005133 6.4e-96 356.3 860 30.9
SEGI_24302 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 4.6e-78 297.0 211 69.7
Cre02.g086700 Chlamydomonas reinhardtii HOM05D004547 ORTHO05D005133 2.5e-76 291.2 857 27.7
CDE04G2539 Ceratophyllum demersum HOM05D004547 ORTHO05D005133 3.2e-63 247.7 273 53.1
SEGI_05738 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 2.7e-62 244.6 230 63.5
SEGI_08321 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 2.0e-60 238.4 200 63.0
A10p09220 Brassica napus HOM05D004547 ORTHO05D005133 5.3e-58 230.3 122 93.4
HPP92_005318 Vanilla planifolia HOM05D004547 ORTHO05D005133 1.2e-57 229.2 290 46.9
Os06g0669600 Oryza sativa ssp. japonica HOM05D004547 ORTHO05D005133 2.6e-57 228.0 176 69.3
QL10p003704 Quercus lobata HOM05D004547 ORTHO05D005133 4.5e-49 200.7 209 59.8
Actinidia24695 Actinidia chinensis HOM05D004547 ORTHO05D005133 7.7e-49 199.9 130 71.5
BraA10t42999Z Brassica rapa HOM05D004547 ORTHO05D005133 1.4e-45 189.1 104 93.3
BraA10t43007Z Brassica rapa HOM05D004547 ORTHO05D005133 1.4e-45 189.1 104 93.3
BraA10t43002Z Brassica rapa HOM05D004547 ORTHO05D005133 4.8e-43 180.6 96 92.7
TPR.G196 Trifolium pratense HOM05D004547 ORTHO05D005133 4.8e-43 180.6 127 75.6
A10p09300 Brassica napus HOM05D004547 ORTHO05D005133 6.3e-43 180.3 96 94.8
MD07G1253700 Malus domestica HOM05D004547 ORTHO05D005133 2.7e-38 164.9 105 82.9
Sc14g0005510 Simmondsia chinensis HOM05D004547 ORTHO05D005133 3.7e-35 154.5 95 80.0
TAR082G0001 Trochodendron aralioides HOM05D004547 ORTHO05D005133 4.8e-35 154.1 97 76.3
SEGI_13446 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 3.8e-32 144.4 95 72.6
CAN.G74.49 Capsicum annuum HOM05D004547 ORTHO05D005133 1.8e-29 135.6 230 40.9
Actinidia01052 Actinidia chinensis HOM05D004547 ORTHO05D005133 3.0e-29 134.8 95 71.6
Psat7g163200 Pisum sativum HOM05D004547 ORTHO05D005133 4.0e-29 134.4 130 53.1
FvH4_7g19100 Fragaria vesca HOM05D004547 ORTHO05D005133 1.1e-23 116.3 87 73.6
CAN.G280.11 Capsicum annuum HOM05D004547 ORTHO05D005133 6.1e-22 110.5 212 37.7
CAN.G903.1 Capsicum annuum HOM05D004547 ORTHO05D005133 8.0e-22 110.2 227 35.7
GSVIVG01036042001 Vitis vinifera HOM05D004547 ORTHO05D005133 1.8e-21 109.0 145 45.5
CAN.G689.6 Capsicum annuum HOM05D004547 ORTHO05D005133 1.2e-20 106.3 82 68.3
Nitab4.5_0004558g0010 Nicotiana tabacum HOM05D004547 ORTHO05D016189 1.2e-20 106.3 220 34.5
SEGI_29591 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 5.8e-20 104.0 99 47.5
Duzib147G0620 Durio zibethinus HOM05D004547 ORTHO05D005133 1.9e-18 99.0 70 68.6
FAN06G3837 Fragaria x ananassa HOM05D004547 ORTHO05D005133 5.0e-16 90.9 72 66.7
Haze_23095 Corylus avellana HOM05D001506 ORTHO05D000455 1.6e-14 85.9 78 64.1
CAN.G118.7 Capsicum annuum HOM05D004547 ORTHO05D005133 4.1e-10 71.2 58 63.8
Nitab4.5_0011021g0010 Nicotiana tabacum HOM05D001522 ORTHO05D016189 2.7e-09 68.6 158 32.9
Pp3c11_26770 Physcomitrium patens HOM05D004547 ORTHO05D005133 3.0e-08 65.1 67 50.7
CAN.G689.5 Capsicum annuum HOM05D004547 ORTHO05D005133 1.2e-06 59.7 54 53.7


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