Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 1.1e-133 479.9 241 100.0
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 2.2e-118 429.1 243 88.5
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 4.0e-115 418.3 241 88.0
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 2.0e-114 416.0 243 86.0
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 7.0e-112 407.5 243 84.4
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 1.7e-110 402.9 236 86.9
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 2.8e-100 369.0 228 80.7
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 8.0e-100 367.5 234 79.5
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 1.4e-99 366.7 234 78.6
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 6.8e-99 364.4 233 79.0
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 1.2e-98 363.6 234 78.6
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 1.5e-98 363.2 236 79.2
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 2.6e-98 362.5 231 80.1
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 3.4e-98 362.1 233 78.5
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 5.8e-98 361.3 233 77.7
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 6.4e-97 357.8 227 79.7
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 2.4e-96 355.9 234 76.9
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 3.2e-96 355.5 227 78.9
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 7.0e-96 354.4 235 76.6
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 1.2e-95 353.6 227 78.9
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 2.7e-95 352.4 223 79.8
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 3.5e-95 352.1 227 77.5
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 6.0e-95 351.3 233 75.1
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 6.0e-95 351.3 231 77.1
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 7.8e-95 350.9 235 75.7
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 6.6e-94 347.8 233 75.1
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 8.6e-94 347.4 230 75.7
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 8.6e-94 347.4 233 76.0
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 1.1e-93 347.1 228 77.6
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.5e-93 346.7 223 78.0
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 1.9e-93 346.3 228 78.1
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 7.3e-93 344.4 233 75.1
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 1.2e-92 343.6 227 76.2
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 1.6e-92 343.2 240 75.8
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 6.2e-92 341.3 225 77.8
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 8.1e-92 340.9 236 73.7
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 1.1e-91 340.5 249 71.9
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 1.1e-91 340.5 249 71.9
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 1.4e-91 340.1 243 72.0
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 2.3e-91 339.3 233 74.2
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 2.3e-91 339.3 239 72.8
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 5.2e-91 338.2 236 73.3
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 5.2e-91 338.2 229 74.2
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 1.2e-90 337.0 233 72.5
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 1.5e-90 336.7 232 74.6
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 2.0e-90 336.3 239 72.4
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 3.4e-90 335.5 239 72.0
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 4.4e-90 335.1 240 71.2
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 5.8e-90 334.7 233 73.4
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 7.5e-90 334.3 234 70.5
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 7.5e-90 334.3 234 70.5
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 9.8e-90 334.0 230 73.5
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 9.8e-90 334.0 224 75.9
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 1.3e-89 333.6 234 73.9
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 1.3e-89 333.6 251 71.7
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 1.3e-89 333.6 233 73.0
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 2.2e-89 332.8 233 73.0
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 2.2e-89 332.8 240 72.5
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 6.4e-89 331.3 234 73.5
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 8.3e-89 330.9 233 72.5
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 1.1e-88 330.5 235 72.3
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 2.4e-88 329.3 246 70.3
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 4.1e-88 328.6 234 71.8
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 4.1e-88 328.6 223 74.0
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 9.2e-88 327.4 229 74.2
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 9.2e-88 327.4 246 69.9
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.2e-87 327.0 235 71.9
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.2e-87 327.0 235 71.9
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 7.8e-87 324.3 236 70.8
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 7.8e-87 324.3 229 72.9
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 3.9e-86 322.0 229 72.5
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 2.1e-84 316.2 269 63.9
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 3.1e-83 312.4 231 71.9
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 3.2e-80 302.4 250 66.4
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 4.1e-80 302.0 227 66.5
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 4.1e-80 302.0 250 66.4
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.7e-78 296.6 227 64.3
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 1.1e-77 293.9 203 74.9
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 8.1e-76 287.7 229 67.2
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 8.1e-76 287.7 227 65.6
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 3.2e-72 275.8 201 70.1
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 4.2e-72 275.4 175 77.7
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 7.1e-72 274.6 201 70.6
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 1.3e-68 263.8 197 70.1
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 4.9e-65 251.9 226 58.4
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 3.9e-62 242.3 247 54.3
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 3.3e-61 239.2 223 61.0
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 1.4e-59 233.8 137 83.2
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 1.7e-57 226.9 221 52.5
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 2.4e-51 206.5 140 75.0
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 1.5e-50 203.8 155 67.7
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 2.6e-50 203.0 222 50.0
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 2.5e-45 186.4 243 45.3
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 9.6e-45 184.5 154 64.3
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 1.2e-26 124.4 83 72.3
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 2.5e-24 116.7 218 32.6
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 3.3e-13 79.7 123 43.1
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 1.1e-11 74.7 57 64.9


User provided reference genes

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