Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g09970 Schrenkiella parvula HOM05D009590 ORTHO05D014118 8.2e-76 287.0 143 100.0
BcaB07g32585 Brassica carinata HOM05D009590 ORTHO05D014118 6.2e-23 111.3 126 49.2
BcaC06g36732 Brassica carinata HOM05D009590 ORTHO05D014118 5.4e-19 98.2 84 56.0
BcaC02g10657 Brassica carinata HOM05D009590 ORTHO05D014118 7.0e-19 97.8 86 53.5
C03p10840 Brassica napus HOM05D009590 ORTHO05D100504 7.0e-19 97.8 84 58.3
C04p26320 Brassica napus HOM05D009590 ORTHO05D042950 7.0e-19 97.8 86 53.5
BolC4t24175H Brassica oleracea HOM05D009590 ORTHO05D042950 7.0e-19 97.8 86 53.5
C01p30030 Brassica napus HOM05D009590 ORTHO05D042627 3.0e-17 92.4 106 50.0
BolC1t02943H Brassica oleracea HOM05D009590 ORTHO05D042627 3.0e-17 92.4 106 50.0
BolC2t07403H Brassica oleracea HOM05D009590 ORTHO05D014118 5.0e-17 91.7 102 46.1
BcaNung03499 Brassica carinata HOM05D009590 ORTHO05D020087 6.6e-17 91.3 116 43.1
BraA01t02898Z Brassica rapa HOM05D009590 ORTHO05D014118 5.6e-16 88.2 73 58.9
BolC1t03303H Brassica oleracea HOM05D009590 ORTHO05D014118 7.3e-16 87.8 89 50.6
A01p27590 Brassica napus HOM05D009590 ORTHO05D014118 2.1e-15 86.3 72 58.3
Sp5g15830 Schrenkiella parvula HOM05D001959 ORTHO05D001955 1.1e-14 84.0 88 58.0
C04p12300 Brassica napus HOM05D009590 ORTHO05D014118 5.2e-14 81.6 124 37.9
BolC4t22877H Brassica oleracea HOM05D009590 ORTHO05D014118 6.8e-14 81.3 84 50.0
BcaB05g23366 Brassica carinata HOM05D009117 ORTHO05D012204 1.3e-12 77.0 130 37.7
A07p43380 Brassica napus HOM05D009117 ORTHO05D024074 1.6e-10 70.1 105 34.3
BcaB05g23704 Brassica carinata HOM05D009117 ORTHO05D012204 2.1e-10 69.7 77 44.2
BraA01t02653Z Brassica rapa HOM05D009117 ORTHO05D012204 4.6e-10 68.6 75 45.3
C07p19280 Brassica napus HOM05D009117 ORTHO05D012204 6.0e-10 68.2 78 43.6
C02p27840 Brassica napus HOM05D009117 ORTHO05D012204 7.8e-10 67.8 78 43.6
C02p28440 Brassica napus HOM05D009117 ORTHO05D012204 7.8e-10 67.8 78 43.6
BolC1t02526H Brassica oleracea HOM05D009117 ORTHO05D012204 7.8e-10 67.8 78 43.6
BolC2t08887H Brassica oleracea HOM05D009117 ORTHO05D012204 7.8e-10 67.8 78 43.6
BolC3t21359H Brassica oleracea HOM05D009117 ORTHO05D012204 1.0e-09 67.4 78 43.6
A03p68140 Brassica napus HOM05D009117 ORTHO05D012204 1.3e-09 67.0 75 44.0
A09p37280 Brassica napus HOM05D009117 ORTHO05D012204 1.3e-09 67.0 75 44.0
Sp1g39000 Schrenkiella parvula HOM05D009590 ORTHO05D372274 1.3e-09 67.0 70 47.1
BcaC08g43055 Brassica carinata HOM05D009117 ORTHO05D024074 1.7e-09 66.6 82 40.2
A02p20020 Brassica napus HOM05D009117 ORTHO05D012204 3.0e-09 65.9 75 42.7
A09p17260 Brassica napus HOM05D009117 ORTHO05D012204 3.0e-09 65.9 75 42.7
C01p25760 Brassica napus HOM05D009117 ORTHO05D012204 3.9e-09 65.5 78 42.3
BolC7t41869H Brassica oleracea HOM05D009117 ORTHO05D012204 5.1e-09 65.1 78 42.3
BcaC04g20540 Brassica carinata HOM05D009590 ORTHO05D014118 1.1e-08 63.9 54 55.6
C09p34070 Brassica napus HOM05D009590 ORTHO05D020087 5.6e-08 61.6 72 47.2
BolC9t56243H Brassica oleracea HOM05D009590 ORTHO05D020087 5.6e-08 61.6 72 47.2
Sp5g20570 Schrenkiella parvula HOM05D009590 ORTHO05D014118 6.2e-07 58.2 45 57.8
BcaC03g16331 Brassica carinata HOM05D009590 ORTHO05D014118 1.8e-06 56.6 48 50.0
SpUn1355_0010 Schrenkiella parvula HOM05D011239 ORTHO05D008901 4.0e-06 55.5 46 63.0


User provided reference genes

Program Settings