Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 1.1e-49 199.9 115 100.0
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 4.4e-48 194.5 115 97.4
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 4.4e-48 194.5 115 97.4
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 4.4e-48 194.5 115 98.3
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 9.9e-48 193.4 115 88.7
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 1.0e-44 183.3 115 87.8
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 2.3e-44 182.2 109 97.2
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 2.3e-44 182.2 109 97.2
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 2.0e-40 169.1 115 87.8
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 3.4e-40 168.3 115 89.6
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 7.6e-40 167.2 115 88.7
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 1.7e-39 166.0 115 88.7
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.6e-37 159.5 115 81.7
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 4.6e-37 157.9 114 75.4
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 1.3e-36 156.4 115 75.7
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 1.3e-36 156.4 115 75.7
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 5.6e-35 151.0 115 77.4
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 1.6e-34 149.4 114 66.7
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.1e-34 149.1 115 74.8
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 3.1e-33 145.2 116 76.7
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 9.0e-33 143.7 115 77.4
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 1.5e-32 142.9 114 71.1
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 7.6e-32 140.6 115 69.6
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.0e-31 140.2 115 69.6
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 1.3e-31 139.8 115 67.0
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 1.3e-31 139.8 115 67.0
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 1.7e-31 139.4 115 75.7
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 2.9e-31 138.7 115 67.0
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 2.9e-31 138.7 115 71.3
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 3.8e-31 138.3 115 66.1
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 4.9e-31 137.9 115 67.8
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 1.4e-30 136.3 115 66.1
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.4e-30 136.3 115 76.5
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 1.9e-30 136.0 115 72.2
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 2.5e-30 135.6 115 64.3
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.5e-30 135.6 115 67.0
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 2.5e-30 135.6 115 64.3
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 2.5e-30 135.6 124 58.1
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 3.2e-30 135.2 109 70.6
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 3.2e-30 135.2 115 74.8
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 4.2e-30 134.8 115 72.2
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 5.5e-30 134.4 116 64.7
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 5.5e-30 134.4 118 59.3
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 7.1e-30 134.0 116 64.7
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 7.1e-30 134.0 115 71.3
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 7.1e-30 134.0 115 73.9
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 9.3e-30 133.7 115 66.1
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 9.3e-30 133.7 120 60.0
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.2e-29 133.3 114 65.8
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 1.2e-29 133.3 109 74.3
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 2.7e-29 132.1 114 66.7
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 3.5e-29 131.7 114 71.1
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 3.5e-29 131.7 115 66.1
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 4.6e-29 131.3 115 63.5
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 6.0e-29 131.0 114 63.2
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 7.9e-29 130.6 114 63.2
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 7.9e-29 130.6 115 61.7
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 1.0e-28 130.2 118 58.5
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.3e-28 129.8 114 61.4
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 1.3e-28 129.8 114 64.9
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 1.8e-28 129.4 114 63.2
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.8e-28 129.4 114 63.2
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.8e-28 129.4 109 67.9
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 3.0e-28 128.6 109 69.7
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 3.0e-28 128.6 108 77.8
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 5.1e-28 127.9 114 63.2
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 5.1e-28 127.9 115 68.7
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 6.7e-28 127.5 115 67.8
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 6.7e-28 127.5 115 67.8
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 8.7e-28 127.1 114 57.0
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 8.7e-28 127.1 114 66.7
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 8.7e-28 127.1 114 65.8
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.5e-27 126.3 109 63.3
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 1.9e-27 125.9 114 63.2
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.9e-27 125.9 108 64.8
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 1.9e-27 125.9 108 64.8
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.9e-27 125.9 115 71.3
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 4.3e-27 124.8 114 68.4
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 4.3e-27 124.8 104 71.2
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.7e-27 124.4 115 60.9
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 5.7e-27 124.4 110 62.7
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 5.7e-27 124.4 114 64.9
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 1.3e-26 123.2 115 64.3
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 4.8e-26 121.3 114 63.2
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 1.4e-25 119.8 112 56.2
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 1.4e-25 119.8 112 56.2
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 1.8e-25 119.4 114 65.8
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 4.1e-25 118.2 115 62.6
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 1.2e-24 116.7 111 55.9
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 1.2e-24 116.7 114 61.4
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 1.2e-24 116.7 114 64.0
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 2.6e-24 115.5 109 62.4
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.0e-23 113.6 109 56.9
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 2.9e-23 112.1 97 70.1
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 2.9e-23 112.1 115 65.2
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 3.8e-23 111.7 89 84.3
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 5.0e-23 111.3 107 66.4
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 1.4e-22 109.8 110 58.2
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 3.2e-22 108.6 114 65.8
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 3.2e-22 108.6 82 84.1
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 3.2e-22 108.6 115 48.7
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 5.5e-22 107.8 115 61.7
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 7.2e-22 107.5 104 56.7
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 3.5e-21 105.1 91 65.9
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 2.3e-20 102.4 114 56.1
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.3e-20 102.4 102 56.9
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 5.1e-20 101.3 98 61.2
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.5e-19 99.0 77 76.6
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 4.3e-19 98.2 57 82.5
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 1.4e-17 93.2 91 62.6
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.8e-17 92.8 92 65.2
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 1.0e-15 87.0 114 57.0
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 1.1e-14 83.6 77 64.9
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 9.7e-11 70.5 115 43.5
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 4.8e-10 68.2 102 54.9
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 6.3e-10 67.8 111 47.7
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 4.5e-08 61.6 64 60.9
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.2e-07 59.3 107 40.2
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 1.4e-06 56.6 115 48.7


User provided reference genes

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