Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g08720 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.9e-57 224.9 107 100.0
Sp5g03420 Schrenkiella parvula HOM05D007338 ORTHO05D009406 9.9e-50 199.9 107 85.0
Sp4g10780 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.2e-47 193.0 110 84.5
Sp5g03390 Schrenkiella parvula HOM05D007338 ORTHO05D009406 6.0e-47 190.7 96 89.6
Sp5g03400 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.7e-46 189.1 96 89.6
Sp6g08680 Schrenkiella parvula HOM05D007338 ORTHO05D009406 4.3e-45 184.5 96 89.6
Sp5g03410 Schrenkiella parvula HOM05D007338 ORTHO05D009406 9.5e-45 183.3 96 89.6
Sp5g03380 Schrenkiella parvula HOM05D007338 ORTHO05D009406 5.1e-38 161.0 75 90.7
BcaC04g22284 Brassica carinata HOM05D007338 ORTHO05D009406 3.5e-31 138.3 96 69.8
BcaC04g22279 Brassica carinata HOM05D007338 ORTHO05D009406 7.8e-31 137.1 96 69.8
A09p17160 Brassica napus HOM05D007338 ORTHO05D009406 7.8e-31 137.1 96 68.8
BolC9t55035H Brassica oleracea HOM05D007338 ORTHO05D009406 7.8e-31 137.1 96 69.8
C09p21220 Brassica napus HOM05D007338 ORTHO05D009406 6.6e-30 134.0 96 67.7
Sp2g03780 Schrenkiella parvula HOM05D007338 ORTHO05D009406 8.7e-30 133.7 96 65.6
BcaB07g31238 Brassica carinata HOM05D007338 ORTHO05D009406 4.3e-29 131.3 96 66.7
BcaB07g31240 Brassica carinata HOM05D007338 ORTHO05D009406 4.3e-29 131.3 96 66.7
BcaB07g31237 Brassica carinata HOM05D007338 ORTHO05D009406 2.8e-28 128.6 96 66.7
C09p21390 Brassica napus HOM05D007338 ORTHO05D009406 5.3e-27 124.4 96 62.5
BolC9t55025H Brassica oleracea HOM05D007338 ORTHO05D009406 7.6e-26 120.6 93 62.4
A09p17150 Brassica napus HOM05D007338 ORTHO05D009406 6.4e-25 117.5 142 47.2
Sp2g03760 Schrenkiella parvula HOM05D007338 ORTHO05D009406 8.4e-25 117.1 94 59.6
BraA09t37346Z Brassica rapa HOM05D007338 ORTHO05D009406 1.9e-24 115.9 142 46.5
A04p14100 Brassica napus HOM05D007338 ORTHO05D009406 2.7e-23 112.1 98 54.1
BraA04t17071Z Brassica rapa HOM05D007338 ORTHO05D009406 2.7e-23 112.1 98 54.1
BcaC07g40398 Brassica carinata HOM05D007338 ORTHO05D009406 1.0e-22 110.2 93 60.2
BcaB06g27588 Brassica carinata HOM05D007338 ORTHO05D009406 3.0e-22 108.6 98 54.1
BcaB06g27589 Brassica carinata HOM05D007338 ORTHO05D009406 3.0e-22 108.6 98 54.1
C09p21230 Brassica napus HOM05D007338 ORTHO05D009406 3.0e-22 108.6 93 58.1
C04p48140 Brassica napus HOM05D007338 ORTHO05D009406 5.6e-21 104.4 98 51.0
BolC4t26404H Brassica oleracea HOM05D007338 ORTHO05D009406 5.6e-21 104.4 98 51.0
BcaC09g49320 Brassica carinata HOM05D007338 ORTHO05D009406 2.8e-20 102.1 98 53.1
BraA01t03132Z Brassica rapa HOM05D007338 ORTHO05D009406 2.8e-20 102.1 96 54.2
C09p21400 Brassica napus HOM05D007338 ORTHO05D009406 3.7e-20 101.7 56 73.2
BcaB08g34762 Brassica carinata HOM05D007338 ORTHO05D009406 8.1e-20 100.5 97 54.6
AT5G33355 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 3.1e-19 98.6 92 55.4
AL5G42110 Arabidopsis lyrata HOM05D007338 ORTHO05D009406 4.0e-19 98.2 92 53.3
BcaC09g49309 Brassica carinata HOM05D007338 ORTHO05D009406 5.3e-19 97.8 91 53.8
BcaC09g49321 Brassica carinata HOM05D007338 ORTHO05D009406 5.3e-19 97.8 91 53.8
C01p37930 Brassica napus HOM05D007338 ORTHO05D009406 5.3e-19 97.8 91 53.8
C01p38060 Brassica napus HOM05D007338 ORTHO05D009406 5.3e-19 97.8 91 53.8
BcaB04g20324 Brassica carinata HOM05D007338 ORTHO05D009406 6.9e-19 97.4 91 53.8
BcaC09g49318 Brassica carinata HOM05D007338 ORTHO05D009406 9.0e-19 97.1 91 53.8
BcaC09g49319 Brassica carinata HOM05D007338 ORTHO05D009406 9.0e-19 97.1 91 53.8
BcaC09g49324 Brassica carinata HOM05D007338 ORTHO05D009406 9.0e-19 97.1 91 53.8
A01p29990 Brassica napus HOM05D007338 ORTHO05D009406 9.0e-19 97.1 91 53.8
A01p30010 Brassica napus HOM05D007338 ORTHO05D009406 9.0e-19 97.1 91 53.8
A01p30020 Brassica napus HOM05D007338 ORTHO05D009406 9.0e-19 97.1 91 53.8
A01p30030 Brassica napus HOM05D007338 ORTHO05D009406 9.0e-19 97.1 91 53.8
A01p30070 Brassica napus HOM05D007338 ORTHO05D009406 9.0e-19 97.1 91 53.8
C01p37910 Brassica napus HOM05D007338 ORTHO05D009406 9.0e-19 97.1 91 53.8
C01p37960 Brassica napus HOM05D007338 ORTHO05D009406 9.0e-19 97.1 98 51.0
C01p37970 Brassica napus HOM05D007338 ORTHO05D009406 9.0e-19 97.1 91 53.8
C01p37980 Brassica napus HOM05D007338 ORTHO05D009406 9.0e-19 97.1 91 53.8
AT3G59930 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 1.2e-18 96.7 92 54.3
BcaC09g49316 Brassica carinata HOM05D007338 ORTHO05D009406 1.2e-18 96.7 91 52.7
A01p30000 Brassica napus HOM05D007338 ORTHO05D009406 1.2e-18 96.7 91 52.7
C01p37940 Brassica napus HOM05D007338 ORTHO05D009406 1.2e-18 96.7 91 52.7
C01p38000 Brassica napus HOM05D007338 ORTHO05D009406 1.2e-18 96.7 91 52.7
A01p30050 Brassica napus HOM05D007338 ORTHO05D009406 2.0e-18 95.9 91 52.7
Carub.0005s1075 Capsella rubella HOM05D007338 ORTHO05D009406 2.0e-18 95.9 94 53.2
A01p30040 Brassica napus HOM05D007338 ORTHO05D009406 2.6e-18 95.5 91 52.7
BcaC09g49311 Brassica carinata HOM05D007338 ORTHO05D009406 3.4e-18 95.1 91 52.7
BcaC09g49314 Brassica carinata HOM05D007338 ORTHO05D009406 3.4e-18 95.1 91 52.7
C01p38030 Brassica napus HOM05D007338 ORTHO05D009406 3.4e-18 95.1 91 52.7
C01p38040 Brassica napus HOM05D007338 ORTHO05D009406 4.5e-18 94.7 99 51.5
BcaB04g20323 Brassica carinata HOM05D007338 ORTHO05D009406 5.8e-18 94.4 91 52.7
A01p30060 Brassica napus HOM05D007338 ORTHO05D009406 5.8e-18 94.4 91 52.7
C01p37950 Brassica napus HOM05D007338 ORTHO05D009406 5.8e-18 94.4 91 52.7
Sp7g00850 Schrenkiella parvula HOM05D007338 ORTHO05D009406 5.8e-18 94.4 93 50.5
BcaC09g49322 Brassica carinata HOM05D007338 ORTHO05D009406 7.6e-18 94.0 91 51.6
C01p37920 Brassica napus HOM05D007338 ORTHO05D009406 7.6e-18 94.0 91 51.6
Carub.0005s1076 Capsella rubella HOM05D007338 ORTHO05D009406 2.2e-17 92.4 94 52.1
Sp3g32460 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.9e-17 92.0 100 49.0
BcaC06g31805 Brassica carinata HOM05D007338 ORTHO05D009406 8.4e-17 90.5 92 50.0
BcaC06g31804 Brassica carinata HOM05D007338 ORTHO05D009406 1.1e-16 90.1 92 50.0
AT1G34047 Arabidopsis thaliana HOM05D007338 ORTHO05D009406 1.9e-16 89.4 93 53.8
BcaC09g49310 Brassica carinata HOM05D007338 ORTHO05D009406 1.9e-16 89.4 92 51.1
BolC1t03768H Brassica oleracea HOM05D007338 ORTHO05D009406 1.9e-16 89.4 92 51.1
SpUn1255_0010 Schrenkiella parvula HOM05D007338 ORTHO05D009406 1.9e-16 89.4 99 44.4
BcaC09g49315 Brassica carinata HOM05D007338 ORTHO05D009406 9.3e-16 87.0 98 48.0
BraA01t03137Z Brassica rapa HOM05D007338 ORTHO05D009406 2.1e-15 85.9 93 50.5
Carub.0005s1072 Capsella rubella HOM05D007338 ORTHO05D009406 2.1e-15 85.9 94 48.9
Carub.0005s1074 Capsella rubella HOM05D007338 ORTHO05D009406 2.1e-15 85.9 94 48.9
BraA01t03129Z Brassica rapa HOM05D007338 ORTHO05D009406 2.7e-15 85.5 93 50.5
BraA01t03130Z Brassica rapa HOM05D007338 ORTHO05D009406 2.7e-15 85.5 91 50.5
BraA01t03131Z Brassica rapa HOM05D007338 ORTHO05D009406 2.7e-15 85.5 93 50.5
BraA01t03133Z Brassica rapa HOM05D007338 ORTHO05D009406 2.7e-15 85.5 93 50.5
BraA01t03134Z Brassica rapa HOM05D007338 ORTHO05D009406 2.7e-15 85.5 93 50.5
BraA01t03136Z Brassica rapa HOM05D007338 ORTHO05D009406 2.7e-15 85.5 93 50.5
Carub.0005s1073 Capsella rubella HOM05D007338 ORTHO05D009406 3.5e-15 85.1 94 47.9
C01p38020 Brassica napus HOM05D007338 ORTHO05D009406 2.3e-14 82.4 93 49.5
BolC1t03766H Brassica oleracea HOM05D007338 ORTHO05D009406 2.3e-14 82.4 93 49.5
Sp3g31250 Schrenkiella parvula HOM05D007338 ORTHO05D009406 6.7e-14 80.9 99 45.5
BcaC09g49317 Brassica carinata HOM05D007338 ORTHO05D009406 1.1e-13 80.1 98 44.9
BraA01t03135Z Brassica rapa HOM05D007338 ORTHO05D009406 1.9e-13 79.3 93 48.4
Sp7g07650 Schrenkiella parvula HOM05D007338 ORTHO05D009406 2.5e-13 79.0 93 43.0
Sp3g31220 Schrenkiella parvula HOM05D007338 ORTHO05D009406 9.0e-11 70.5 47 57.4
BolC1t03760H Brassica oleracea HOM05D007338 ORTHO05D009406 2.0e-10 69.3 45 64.4
CARHR284260 Cardamine hirsuta HOM05D007338 ORTHO05D009406 1.6e-07 59.7 71 45.1
CARHR101940 Cardamine hirsuta HOM05D007338 ORTHO05D009406 3.5e-07 58.5 93 39.8
AL4G15700 Arabidopsis lyrata HOM05D007338 ORTHO05D013190 3.0e-06 55.5 91 33.0


User provided reference genes

Program Settings