Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 1.5e-164 582.8 298 100.0
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 7.3e-127 457.6 299 80.6
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 2.9e-107 392.5 298 70.5
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 1.4e-106 390.2 298 69.8
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 1.2e-105 387.1 300 71.7
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 1.3e-99 367.1 298 67.8
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 6.4e-99 364.8 300 68.0
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 9.3e-98 360.9 316 64.2
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 3.5e-97 359.0 300 68.0
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 1.3e-96 357.1 300 65.7
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 4.3e-95 352.1 313 64.9
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 9.3e-82 307.8 315 57.8
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 2.6e-76 289.7 179 82.1
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 2.2e-46 190.3 111 82.9
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 2.1e-33 147.1 160 52.5
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 2.6e-31 140.2 161 47.8
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 5.7e-31 139.0 159 49.1
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 1.1e-29 134.8 150 48.7
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 7.0e-29 132.1 161 47.2
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.2e-28 131.3 162 46.9
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 3.5e-28 129.8 160 47.5
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-27 127.9 157 47.8
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-27 127.9 157 48.4
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 1.3e-27 127.9 162 46.9
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 3.9e-27 126.3 163 46.0
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.0e-27 125.9 157 47.1
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.0e-27 125.9 162 45.7
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 5.0e-27 125.9 158 49.4
CARHR255720 Cardamine hirsuta HOM05D005777 ORTHO05D006854 1.1e-26 124.8 111 64.9
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.1e-26 124.8 158 45.6
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 1.9e-26 124.0 162 48.1
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 3.3e-26 123.2 158 45.6
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 1.6e-25 120.9 164 45.1
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.1e-25 120.6 162 44.4
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 2.8e-25 120.2 157 50.3
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 2.8e-25 120.2 147 49.7
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 4.7e-25 119.4 149 48.3
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 4.7e-25 119.4 165 43.6
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 6.2e-25 119.0 161 42.9
Aa31LG9G11230 Aethionema arabicum HOM05D005777 ORTHO05D006854 1.4e-24 117.9 182 45.1
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 1.4e-24 117.9 147 44.9
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 1.8e-24 117.5 156 46.8
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.8e-24 117.5 164 43.3
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 3.1e-24 116.7 173 42.8
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 5.2e-24 115.9 156 46.8
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 6.8e-24 115.5 154 46.8
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 6.8e-24 115.5 169 41.4
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 8.9e-24 115.2 164 42.1
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 8.9e-24 115.2 161 47.2
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 1.2e-23 114.8 143 48.3
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 1.5e-23 114.4 165 45.5
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 2.0e-23 114.0 164 42.1
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 2.0e-23 114.0 167 43.1
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.4e-23 112.8 133 48.9
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 7.5e-23 112.1 163 44.2
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 9.8e-23 111.7 134 46.3
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 1.3e-22 111.3 388 31.2
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 1.3e-22 111.3 163 41.7
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 2.2e-22 110.5 153 41.2
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 2.2e-22 110.5 163 41.7
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 2.2e-22 110.5 152 44.7
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 3.7e-22 109.8 163 43.6
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 6.4e-22 109.0 156 42.3
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 8.3e-22 108.6 163 43.6
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 1.4e-21 107.8 163 45.4
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 1.9e-21 107.5 156 44.2
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 3.2e-21 106.7 133 49.6
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 4.1e-21 106.3 163 39.3
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.1e-21 106.3 242 34.7
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.2e-20 104.8 79 63.3
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 1.6e-20 104.4 126 45.2
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 4.6e-20 102.8 160 41.9
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 1.3e-19 101.3 127 45.7
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 1.7e-19 100.9 147 41.5
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.7e-19 100.9 79 62.0
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 1.7e-19 100.9 102 51.0
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 2.3e-19 100.5 84 59.5
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 6.6e-19 99.0 144 40.3
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 1.1e-18 98.2 116 44.8
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 1.5e-18 97.8 156 42.9
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 5.6e-18 95.9 166 40.4
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 7.3e-18 95.5 171 39.2
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 7.3e-18 95.5 79 58.2
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 7.3e-18 95.5 145 40.0
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 1.2e-17 94.7 115 43.5
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 1.2e-17 94.7 125 47.2
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 4.7e-17 92.8 157 36.9
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 4.7e-17 92.8 128 43.0
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 1.4e-16 91.3 164 39.6
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.4e-16 91.3 97 47.4
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 3.1e-16 90.1 153 40.5
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 4.0e-16 89.7 164 38.4
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 6.8e-16 89.0 85 56.5
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 3.4e-15 86.7 88 48.9
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 7.5e-15 85.5 84 51.2
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 2.9e-14 83.6 70 55.7
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 6.4e-14 82.4 245 31.4
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 8.3e-14 82.0 108 43.5
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 5.4e-13 79.3 94 44.7
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 1.2e-12 78.2 244 32.4
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 2.1e-12 77.4 88 46.6
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 2.1e-12 77.4 72 52.8
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 3.5e-12 76.6 127 40.2
Eucgr.H03743 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.3e-11 74.7 77 54.5
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 1.7e-11 74.3 288 28.1
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 1.9e-10 70.9 91 41.8
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 3.3e-10 70.1 88 42.0
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 4.3e-10 69.7 88 44.3
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 7.3e-10 68.9 78 43.6
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.6e-09 67.8 98 41.8
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.1e-09 67.4 71 46.5
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 2.1e-09 67.4 85 42.4
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 4.7e-09 66.2 70 44.3
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 1.8e-08 64.3 73 46.6
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 1.8e-08 64.3 278 26.6
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 2.6e-07 60.5 289 25.6
Hma1.2p1_0338F.1_g129700 Hydrangea macrophylla HOM05D005777 ORTHO05D006854 3.8e-06 56.6 63 47.6
SHI06954 Sapria himalayana HOM05D000023 ORTHO05D000014 3.8e-06 56.6 75 38.7
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 6.4e-06 55.8 87 37.9


User provided reference genes

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