Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g06590 Schrenkiella parvula HOM05D012458 ORTHO05D014337 8.6e-73 276.9 145 100.0
Thhalv10029446m.g Eutrema salsugineum HOM05D012458 ORTHO05D014337 5.1e-49 198.0 124 86.3
BcaB05g23873 Brassica carinata HOM05D012458 ORTHO05D014337 4.0e-46 188.3 116 85.3
AT4G10910 Arabidopsis thaliana HOM05D012458 ORTHO05D014337 9.0e-46 187.2 125 83.2
AL6G45000 Arabidopsis lyrata HOM05D012458 ORTHO05D014337 1.2e-45 186.8 125 84.0
Carub.0006s2965 Capsella rubella HOM05D012458 ORTHO05D014337 4.2e-43 178.3 134 76.1
CARHR255700 Cardamine hirsuta HOM05D012458 ORTHO05D014337 2.5e-40 169.1 127 75.6
A02p26440 Brassica napus HOM05D012458 ORTHO05D014337 5.6e-40 167.9 116 81.0
BraA02t07647Z Brassica rapa HOM05D012458 ORTHO05D014337 5.6e-40 167.9 116 81.0
C02p42040 Brassica napus HOM05D012458 ORTHO05D014337 1.6e-39 166.4 116 80.2
BolC2t10239H Brassica oleracea HOM05D012458 ORTHO05D014337 3.6e-39 165.2 116 79.3
Aa31LG9G11210 Aethionema arabicum HOM05D012458 ORTHO05D014337 1.9e-35 152.9 141 61.7
BcaC03g16381 Brassica carinata HOM05D012458 ORTHO05D014337 1.6e-34 149.8 107 79.4
THA.LOC104813045 Tarenaya hassleriana HOM05D012458 ORTHO05D014337 2.3e-17 92.8 142 46.5
Cpa.g.sc634.4 Carica papaya HOM05D002255 ORTHO05D002288 2.5e-08 62.8 160 33.1
Peaxi162Scf00102g01853 Petunia axillaris HOM05D002255 ORTHO05D002288 5.7e-08 61.6 63 47.6
Manes.02G008000 Manihot esculenta HOM05D002255 ORTHO05D002288 1.3e-07 60.5 59 50.8
ClCG07G011470 Citrullus lanatus HOM05D002255 ORTHO05D002288 1.7e-07 60.1 65 53.8
Solyc08g008360.2 Solanum lycopersicum HOM05D002255 ORTHO05D002288 3.7e-07 58.9 87 39.1
Ca_17465_v3 Cicer arietinum L. HOM05D002255 ORTHO05D002288 8.2e-07 57.8 58 50.0
ECA246G0612 Erigeron canadensis HOM05D002255 ORTHO05D002288 8.2e-07 57.8 46 60.9
PGSC0003DMG400005843 Solanum tuberosum HOM05D002255 ORTHO05D002288 8.2e-07 57.8 87 39.1
TWI60G0014 Tripterygium wilfordii HOM05D002255 ORTHO05D002288 8.2e-07 57.8 44 63.6
Potri.001G089000 Populus trichocarpa HOM05D002255 ORTHO05D002288 1.1e-06 57.4 59 49.2
Thecc.03G301000 Theobroma cacao HOM05D002255 ORTHO05D002288 1.4e-06 57.0 51 51.0
MELO3C016274.2 Cucumis melo HOM05D002255 ORTHO05D002288 1.8e-06 56.6 51 56.9
Lj4g0026828 Lotus japonicus HOM05D002255 ORTHO05D002288 1.8e-06 56.6 59 47.5
Medtr8g099655 Medicago truncatula HOM05D002255 ORTHO05D002288 1.8e-06 56.6 56 51.8
CsaV3_4G006750 Cucumis sativus L. HOM05D002255 ORTHO05D002288 2.4e-06 56.2 51 56.9
Hma1.2p1_0359F.1_g135100 Hydrangea macrophylla HOM05D002255 ORTHO05D002288 2.4e-06 56.2 58 48.3
Sabra01G0065200 Salix brachista HOM05D002255 ORTHO05D002288 2.4e-06 56.2 59 49.2
Sopen08g004240 Solanum pennellii HOM05D002255 ORTHO05D002288 2.4e-06 56.2 89 36.0
CANSAT21G1974 Cannabis sativa HOM05D002255 ORTHO05D002288 3.1e-06 55.8 58 48.3
Gohir.A02G099300 Gossypium hirsutum HOM05D002255 ORTHO05D002288 3.1e-06 55.8 63 44.4
Rhsim02G0246900 Rhododendron simsii HOM05D002255 ORTHO05D002288 3.1e-06 55.8 112 32.1
CSS0015495 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 4.1e-06 55.5 50 54.0
CSS0048832 Camellia sinensis var. sinensis HOM05D002255 ORTHO05D002288 4.1e-06 55.5 63 50.8
Eucgr.E00885 Eucalyptus grandis HOM05D002255 ORTHO05D002288 4.1e-06 55.5 82 41.5
Gohir.D03G084400 Gossypium hirsutum HOM05D002255 ORTHO05D002288 4.1e-06 55.5 161 30.4
Gorai.003G078200 Gossypium raimondii HOM05D002255 ORTHO05D002288 4.1e-06 55.5 161 30.4
HanXRQChr17g0534981 Helianthus annuus HOM05D002255 ORTHO05D002288 4.1e-06 55.5 50 56.0
MBI06_g13416_MAGBIO Magnolia biondii HOM05D002255 ORTHO05D002288 4.1e-06 55.5 54 50.0
Ciclev10023315m.g Citrus clementina HOM05D002255 ORTHO05D002288 5.3e-06 55.1 52 50.0
TPR.G3449 Trifolium pratense HOM05D002255 ORTHO05D002288 5.3e-06 55.1 56 50.0
Actinidia22177 Actinidia chinensis HOM05D002255 ORTHO05D002288 6.9e-06 54.7 49 57.1
Glyma.05G218300 Glycine max HOM05D002255 ORTHO05D002288 6.9e-06 54.7 71 40.8
Lalb_Chr05g0224011 Lupinus albus HOM05D002255 ORTHO05D002288 6.9e-06 54.7 56 46.4


User provided reference genes

Program Settings