Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g06470 Schrenkiella parvula HOM05D002123 ORTHO05D371241 3.0e-123 445.3 238 100.0
Sp2g23350 Schrenkiella parvula HOM05D002123 ORTHO05D002163 1.8e-27 127.1 91 74.7
Carub.0006s2164 Capsella rubella HOM05D002123 ORTHO05D002163 3.1e-27 126.3 91 73.6
AL6G35240 Arabidopsis lyrata HOM05D002123 ORTHO05D002163 4.0e-27 125.9 91 73.6
AT5G23920 Arabidopsis thaliana HOM05D002123 ORTHO05D002163 1.5e-26 124.0 91 71.4
Thhalv10004859m.g Eutrema salsugineum HOM05D002123 ORTHO05D002163 2.6e-26 123.2 91 72.5
BraA09t36318Z Brassica rapa HOM05D002123 ORTHO05D002163 2.9e-25 119.8 91 68.1
A09p06730 Brassica napus HOM05D002123 ORTHO05D002163 4.9e-25 119.0 89 69.7
C09p07470 Brassica napus HOM05D002123 ORTHO05D002163 6.4e-25 118.6 91 67.0
BolC9t53662H Brassica oleracea HOM05D002123 ORTHO05D002163 6.4e-25 118.6 91 67.0
Aa31LG11G3230 Aethionema arabicum HOM05D002123 ORTHO05D002163 8.4e-25 118.2 89 71.9
THA.LOC104821388 Tarenaya hassleriana HOM05D002123 ORTHO05D002163 2.5e-21 106.7 93 60.2
CARHR189640 Cardamine hirsuta HOM05D002123 ORTHO05D002163 3.7e-12 76.3 60 68.3
MD07G1273800 Malus domestica HOM05D002123 ORTHO05D002163 1.8e-11 73.9 96 43.8
FAN10G4011 Fragaria x ananassa HOM05D002123 ORTHO05D002163 3.1e-11 73.2 158 36.1
MD01G1205200 Malus domestica HOM05D002123 ORTHO05D002163 6.9e-11 72.0 96 43.8
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 9.0e-11 71.6 158 35.4
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 9.0e-11 71.6 158 35.4
FAN06G2725 Fragaria x ananassa HOM05D002123 ORTHO05D002163 9.0e-11 71.6 158 35.4
FAN10G1220 Fragaria x ananassa HOM05D002123 ORTHO05D002163 9.0e-11 71.6 158 35.4
FvH4_7g29880 Fragaria vesca HOM05D002123 ORTHO05D002163 1.2e-10 71.2 158 35.4
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.5e-10 70.9 158 35.4
FAN06G2482 Fragaria x ananassa HOM05D002123 ORTHO05D002163 1.5e-10 70.9 158 35.4
RcHm_v2.0_Chr1g0377841 Rosa chinensis HOM05D002123 ORTHO05D002163 2.0e-10 70.5 96 41.7
Ciclev10005703m.g Citrus clementina HOM05D002123 ORTHO05D002163 2.6e-10 70.1 158 35.4
Prupe.2G297800 Prunus persica HOM05D002123 ORTHO05D002163 3.4e-10 69.7 82 45.1
Sabra15G0155600 Salix brachista HOM05D002123 ORTHO05D002163 4.5e-10 69.3 96 40.6
Sabra12G0107800 Salix brachista HOM05D002123 ORTHO05D002163 5.8e-10 68.9 93 43.0
EL10Ac3g05598 Beta vulgaris HOM05D002123 ORTHO05D002163 1.3e-09 67.8 155 34.2
Duzib205G1780 Durio zibethinus HOM05D002123 ORTHO05D002163 1.3e-09 67.8 99 40.4
CiPaw.05G264000 Carya illinoinensis HOM05D002123 ORTHO05D002163 1.7e-09 67.4 82 46.3
Potri.015G146400 Populus trichocarpa HOM05D002123 ORTHO05D002163 2.2e-09 67.0 82 45.1
Glyma.10G233300 Glycine max HOM05D002123 ORTHO05D002163 2.9e-09 66.6 97 41.2
Manes.14G024600 Manihot esculenta HOM05D002123 ORTHO05D002163 2.9e-09 66.6 96 41.7
PSO478G3801 Papaver somniferum HOM05D002123 ORTHO05D002163 4.9e-09 65.9 94 43.6
Glyma.20G161100 Glycine max HOM05D002123 ORTHO05D002163 6.4e-09 65.5 90 43.3
Duzib068G0703 Durio zibethinus HOM05D002123 ORTHO05D002163 8.4e-09 65.1 99 39.4
Migut.F00324 Erythranthe guttata HOM05D002123 ORTHO05D002163 8.4e-09 65.1 93 39.8
Gohir.A09G181800 Gossypium hirsutum HOM05D002123 ORTHO05D002163 8.4e-09 65.1 99 39.4
Lj5g0011805 Lotus japonicus HOM05D002123 ORTHO05D002163 8.4e-09 65.1 96 42.7
Lalb_Chr06g0161231 Lupinus albus HOM05D002123 ORTHO05D002163 8.4e-09 65.1 96 41.7
Oeu022596.1 Olea europaea HOM05D002123 ORTHO05D002163 8.4e-09 65.1 97 40.2
PSO782G2540 Papaver somniferum HOM05D002123 ORTHO05D002163 8.4e-09 65.1 155 34.2
vmacro06654 Vaccinium macrocarpon HOM05D002123 ORTHO05D002163 8.4e-09 65.1 96 41.7
Hma1.2p1_0227F.1_g095930 Hydrangea macrophylla HOM05D002123 ORTHO05D002163 1.1e-08 64.7 80 45.0
Ca_10740_v3 Cicer arietinum L. HOM05D002123 ORTHO05D002163 1.4e-08 64.3 82 46.3
COL.COLO4_28043 Corchorus olitorius HOM05D002123 ORTHO05D002163 1.4e-08 64.3 161 31.7
Lalb_Chr21g0305141 Lupinus albus HOM05D002123 ORTHO05D002163 1.4e-08 64.3 96 40.6
Gorai.006G198600 Gossypium raimondii HOM05D002123 ORTHO05D002163 1.9e-08 63.9 99 38.4
TWI14G0772 Tripterygium wilfordii HOM05D002123 ORTHO05D002163 2.5e-08 63.5 158 34.2
Haze_00015 Corylus avellana HOM05D002123 ORTHO05D002163 4.2e-08 62.8 98 40.8
Cpa.g.sc107.77 Carica papaya HOM05D002123 ORTHO05D002163 5.5e-08 62.4 81 40.7
Cc02_g02690 Coffea canephora HOM05D002123 ORTHO05D002163 5.5e-08 62.4 80 43.8
Thecc.03G180100 Theobroma cacao HOM05D002123 ORTHO05D002163 7.1e-08 62.0 99 36.4
VMungo0464G1231 Vigna mungo HOM05D002123 ORTHO05D002163 7.1e-08 62.0 96 39.6
CSS0050206 Camellia sinensis var. sinensis HOM05D002123 ORTHO05D002163 9.3e-08 61.6 97 39.2
TAR374G1112 Trochodendron aralioides HOM05D002123 ORTHO05D002163 9.3e-08 61.6 93 40.9
TAR374G1135 Trochodendron aralioides HOM05D002123 ORTHO05D002163 9.3e-08 61.6 93 39.8
Prupe.2G297700 Prunus persica HOM05D002123 ORTHO05D002163 1.2e-07 61.2 96 37.5
Lj1P1001T17 Lonicera japonica HOM05D002123 ORTHO05D002163 1.6e-07 60.8 80 43.8
MD07G1273700 Malus domestica HOM05D002123 ORTHO05D002163 1.6e-07 60.8 95 36.8
Oeu004108.1 Olea europaea HOM05D002123 ORTHO05D002163 1.6e-07 60.8 79 44.3
Prupe.2G297600 Prunus persica HOM05D002123 ORTHO05D002163 1.6e-07 60.8 98 37.8
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 1.6e-07 60.8 87 41.4
CSS0050156 Camellia sinensis var. sinensis HOM05D002123 ORTHO05D002163 2.1e-07 60.5 79 43.0
CiPaw.05G136600 Carya illinoinensis HOM05D002123 ORTHO05D002163 2.1e-07 60.5 84 46.4
Phvul.004G113300 Phaseolus vulgaris HOM05D002123 ORTHO05D002163 2.1e-07 60.5 93 37.6
Phvul.007G072500 Phaseolus vulgaris HOM05D002123 ORTHO05D002163 2.1e-07 60.5 96 35.4
Actinidia25890 Actinidia chinensis HOM05D002123 ORTHO05D002163 3.5e-07 59.7 96 37.5
Psat6g197080 Pisum sativum HOM05D002123 ORTHO05D002163 3.5e-07 59.7 97 38.1
Solyc03g025430.1 Solanum lycopersicum HOM05D002123 ORTHO05D002163 3.5e-07 59.7 99 37.4
TAR629G0563 Trochodendron aralioides HOM05D002123 ORTHO05D002163 3.5e-07 59.7 93 38.7
DCAR_010296 Daucus carota HOM05D002123 ORTHO05D002163 4.6e-07 59.3 145 33.1
DCAR_010297 Daucus carota HOM05D002123 ORTHO05D002163 4.6e-07 59.3 145 33.1
Sopen03g004270 Solanum pennellii HOM05D002123 ORTHO05D002163 4.6e-07 59.3 80 40.0
PGSC0003DMG400015799 Solanum tuberosum HOM05D002123 ORTHO05D002163 4.6e-07 59.3 80 40.0
Cfa016263 Carpinus fangiana HOM05D002123 ORTHO05D002163 6.0e-07 58.9 145 33.1
Glyma.16G181600 Glycine max HOM05D002123 ORTHO05D002163 7.9e-07 58.5 96 37.5
VMungo0720G3024 Vigna mungo HOM05D002123 ORTHO05D002163 7.9e-07 58.5 95 36.8
MELO3C005829.2 Cucumis melo HOM05D002123 ORTHO05D002163 1.0e-06 58.2 81 39.5
Oeu018996.1 Olea europaea HOM05D002123 ORTHO05D002163 1.0e-06 58.2 80 41.2
Aqoxy7G00295 Aquilegia oxysepala HOM05D002123 ORTHO05D002163 1.8e-06 57.4 80 41.2
ClCG01G001060 Citrullus lanatus HOM05D002123 ORTHO05D002163 1.8e-06 57.4 82 36.6
Rhsim09G0199000 Rhododendron simsii HOM05D002123 ORTHO05D002163 1.8e-06 57.4 79 41.8
BcaB02g07485 Brassica carinata HOM05D004223 ORTHO05D004792 2.3e-06 57.0 43 65.1
Thhalv10006050m.g Eutrema salsugineum HOM05D004223 ORTHO05D004792 2.3e-06 57.0 43 65.1
Sp5g03900 Schrenkiella parvula HOM05D004223 ORTHO05D004792 2.3e-06 57.0 43 65.1
TWI39G0327 Tripterygium wilfordii HOM05D002123 ORTHO05D002163 2.3e-06 57.0 96 37.5
HPP92_005027 Vanilla planifolia HOM05D002123 ORTHO05D002163 2.3e-06 57.0 79 43.0
BcaC07g40242 Brassica carinata HOM05D004223 ORTHO05D004792 3.0e-06 56.6 43 62.8
A07p24480 Brassica napus HOM05D000230 ORTHO05D000176 3.0e-06 56.6 43 62.8
BraA07t30092Z Brassica rapa HOM05D000230 ORTHO05D000176 3.0e-06 56.6 43 62.8
CsaV3_5G001170 Cucumis sativus L. HOM05D002123 ORTHO05D002163 3.0e-06 56.6 81 37.0
MBI18_g29422_MAGBIO Magnolia biondii HOM05D002123 ORTHO05D002163 3.0e-06 56.6 95 38.9
Sc13g0008870 Simmondsia chinensis HOM05D002123 ORTHO05D002163 3.0e-06 56.6 79 40.5
DCAR_020261 Daucus carota HOM05D002123 ORTHO05D002163 3.9e-06 56.2 80 40.0
Glyma.09G136100 Glycine max HOM05D002123 ORTHO05D002163 3.9e-06 56.2 84 39.3
Migut.F01101 Erythranthe guttata HOM05D002123 ORTHO05D002163 6.7e-06 55.5 81 40.7
Atru.chr1.419 Acer truncatum HOM05D002123 ORTHO05D002163 8.7e-06 55.1 83 39.8
Carub.0005s2585 Capsella rubella HOM05D004223 ORTHO05D004792 8.7e-06 55.1 43 65.1
SalBow4G0142 Salvia bowleyana HOM05D002123 ORTHO05D002163 8.7e-06 55.1 74 41.9
TAR362G1100 Trochodendron aralioides HOM05D002123 ORTHO05D002163 8.7e-06 55.1 154 32.5


User provided reference genes

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