Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g05710 Schrenkiella parvula HOM05D001286 ORTHO05D045362 1.3e-102 376.3 175 100.0
BcaB05g23813 Brassica carinata HOM05D001286 ORTHO05D000440 3.9e-19 99.0 223 32.3
Sp6g05700 Schrenkiella parvula HOM05D001286 ORTHO05D000440 3.9e-19 99.0 166 39.2
BcaC01g04623 Brassica carinata HOM05D001286 ORTHO05D000440 6.2e-17 91.7 171 33.9
BraA03t12137Z Brassica rapa HOM05D001286 ORTHO05D000440 8.1e-17 91.3 171 33.9
Sp6g05210 Schrenkiella parvula HOM05D001286 ORTHO05D000440 1.8e-16 90.1 166 34.9
A03p29440 Brassica napus HOM05D001286 ORTHO05D000440 2.3e-16 89.7 171 33.3
C03p35590 Brassica napus HOM05D001286 ORTHO05D000440 5.2e-16 88.6 171 33.3
BolC3t15873H Brassica oleracea HOM05D001286 ORTHO05D000440 5.2e-16 88.6 171 33.3
AT4G00893 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 4.4e-15 85.5 168 33.9
AL6G47240 Arabidopsis lyrata HOM05D001286 ORTHO05D000440 5.8e-15 85.1 182 31.3
BcaB01g02679 Brassica carinata HOM05D001286 ORTHO05D000440 2.2e-14 83.2 169 33.1
A09p10830 Brassica napus HOM05D001286 ORTHO05D000440 2.4e-13 79.7 207 30.9
CARHR253850 Cardamine hirsuta HOM05D001286 ORTHO05D000440 5.4e-13 78.6 168 32.1
A02p26050 Brassica napus HOM05D001286 ORTHO05D000440 7.1e-13 78.2 53 62.3
Carub.0006s3152 Capsella rubella HOM05D001286 ORTHO05D000440 4.6e-12 75.5 208 28.4
A09p10860 Brassica napus HOM05D001286 ORTHO05D000440 7.8e-12 74.7 195 31.8
BraA09t36726Z Brassica rapa HOM05D001286 ORTHO05D000440 1.3e-11 73.9 229 31.0
CARHR216300 Cardamine hirsuta HOM05D001286 ORTHO05D000440 1.7e-11 73.6 170 31.8
C09p12800 Brassica napus HOM05D001286 ORTHO05D000440 2.3e-11 73.2 195 31.3
BolC9t54170H Brassica oleracea HOM05D001286 ORTHO05D000440 2.3e-11 73.2 195 31.3
Carub.0006s3153 Capsella rubella HOM05D001286 ORTHO05D000440 3.9e-11 72.4 217 27.6
Sp4g03050 Schrenkiella parvula HOM05D001286 ORTHO05D000440 5.1e-11 72.0 172 30.2
CARHR253860 Cardamine hirsuta HOM05D001286 ORTHO05D000440 1.1e-10 70.9 166 30.7
A03p29450 Brassica napus HOM05D000315 ORTHO05D000440 9.6e-10 67.8 167 30.5
BraA03t12138Z Brassica rapa HOM05D001286 ORTHO05D000440 9.6e-10 67.8 167 30.5
Sp6g05200 Schrenkiella parvula HOM05D001286 ORTHO05D000440 9.6e-10 67.8 213 28.2
Sp6g05180 Schrenkiella parvula HOM05D001286 ORTHO05D000440 8.1e-09 64.7 191 28.8
BcaB01g02678 Brassica carinata HOM05D001286 ORTHO05D000440 2.4e-08 63.2 167 29.9
AL6G43900 Arabidopsis lyrata HOM05D001286 ORTHO05D000440 1.2e-07 60.8 167 28.7
AT4G10695 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 1.2e-07 60.8 167 29.3
Thhalv10029531m.g Eutrema salsugineum HOM05D001286 ORTHO05D045362 1.2e-07 60.8 60 53.3
BcaB01g01734 Brassica carinata HOM05D001286 ORTHO05D000440 1.5e-07 60.5 180 28.3
Thhalv10029466m.g Eutrema salsugineum HOM05D001286 ORTHO05D000440 2.0e-07 60.1 40 70.0
AT4G12382 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 5.8e-07 58.5 65 47.7
QL07p038675 Quercus lobata HOM05D001286 ORTHO05D000440 9.9e-07 57.8 173 27.2
C03p35920 Brassica napus HOM05D001286 ORTHO05D000440 1.3e-06 57.4 185 28.6
BolC3t15900H Brassica oleracea HOM05D001286 ORTHO05D000440 1.3e-06 57.4 185 28.6
FAN14G4995 Fragaria x ananassa HOM05D001286 ORTHO05D000440 1.7e-06 57.0 112 33.9
Sabra06G0163600 Salix brachista HOM05D001286 ORTHO05D000440 2.2e-06 56.6 173 26.6
Potri.006G212600 Populus trichocarpa HOM05D001286 ORTHO05D000440 2.9e-06 56.2 173 26.6
MSTRG.19268 Avicennia marina HOM05D001286 ORTHO05D000440 3.8e-06 55.8 173 27.7
Potri.016G079300 Populus trichocarpa HOM05D001286 ORTHO05D000440 4.9e-06 55.5 173 27.7
Hund03994 Selenicereus undatus HOM05D001286 ORTHO05D000440 8.4e-06 54.7 173 27.2


User provided reference genes

Program Settings