Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g03510 Schrenkiella parvula HOM05D000264 ORTHO05D000152 3.5e-61 238.0 116 100.0
Sp6g03520 Schrenkiella parvula HOM05D000264 ORTHO05D000152 1.4e-17 93.2 202 36.1
AT4G03480 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 4.1e-17 91.7 62 69.4
Carub.0006s3362 Capsella rubella HOM05D000264 ORTHO05D000152 4.1e-17 91.7 202 32.2
C09p02870 Brassica napus HOM05D000264 ORTHO05D000152 5.3e-17 91.3 196 34.2
CARHR251850 Cardamine hirsuta HOM05D000264 ORTHO05D000152 1.2e-16 90.1 63 69.8
AT4G05040 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 2.7e-16 89.0 62 66.1
Thhalv10029249m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 3.5e-16 88.6 83 55.4
Carub.0006s3358 Capsella rubella HOM05D000264 ORTHO05D000152 4.5e-16 88.2 62 64.5
BcaB01g01945 Brassica carinata HOM05D000264 ORTHO05D000152 1.0e-15 87.0 113 45.1
Thhalv10002422m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 1.1e-14 83.6 79 54.4
AL7G41820 Arabidopsis lyrata HOM05D000264 ORTHO05D000152 3.2e-14 82.0 73 54.8
BcaC04g23968 Brassica carinata HOM05D000264 ORTHO05D000152 4.2e-14 81.6 62 56.5
A09p02790 Brassica napus HOM05D000264 ORTHO05D000152 5.5e-14 81.3 62 58.1
BraA09t35920Z Brassica rapa HOM05D000264 ORTHO05D000152 5.5e-14 81.3 62 58.1
CARHR251840 Cardamine hirsuta HOM05D000264 ORTHO05D000152 8.0e-13 77.4 195 32.3
C03p84220 Brassica napus HOM05D000264 ORTHO05D000152 1.0e-12 77.0 92 47.8
BolC3t20701H Brassica oleracea HOM05D000264 ORTHO05D000152 1.0e-12 77.0 92 47.8
AL6G49420 Arabidopsis lyrata HOM05D000264 ORTHO05D000152 1.8e-12 76.3 202 31.2
CARHR251880 Cardamine hirsuta HOM05D000264 ORTHO05D027696 1.8e-12 76.3 78 48.7
Carub.0006s3357 Capsella rubella HOM05D000264 ORTHO05D000152 2.3e-12 75.9 62 56.5
Carub.0006s3359 Capsella rubella HOM05D000264 ORTHO05D000152 4.0e-12 75.1 117 39.3
BcaC01g00780 Brassica carinata HOM05D000264 ORTHO05D000152 5.2e-12 74.7 92 46.7
A09p02780 Brassica napus HOM05D000264 ORTHO05D000152 8.8e-12 73.9 193 31.6
AT4G14390 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 4.4e-11 71.6 65 50.8
Thhalv10002620m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 5.7e-11 71.2 62 54.8
Carub.0007s2784 Capsella rubella HOM05D000264 ORTHO05D000152 7.5e-11 70.9 73 49.3
Thhalv10028485m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 9.8e-11 70.5 197 29.9
AT4G14400 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 1.3e-10 70.1 203 28.1
AL7G41810 Arabidopsis lyrata HOM05D000264 ORTHO05D000152 4.8e-10 68.2 62 53.2
AT4G03450 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 6.3e-10 67.8 112 41.1
Carub.0106s0002 Capsella rubella HOM05D000264 ORTHO05D000152 3.1e-09 65.5 202 29.2
BolC9t53212H Brassica oleracea HOM05D000264 ORTHO05D000152 7.0e-09 64.3 47 55.3
BcaC04g23969 Brassica carinata HOM05D000264 ORTHO05D000152 1.6e-08 63.2 60 51.7
CARHR002990 Cardamine hirsuta HOM05D000264 ORTHO05D000152 1.6e-08 63.2 102 39.2
BcaC01g06674 Brassica carinata HOM05D000264 ORTHO05D027696 1.0e-07 60.5 45 62.2
C03p36720 Brassica napus HOM05D000264 ORTHO05D000152 1.0e-07 60.5 45 62.2
BolC3t15986H Brassica oleracea HOM05D000264 ORTHO05D000152 1.0e-07 60.5 45 62.2
BraA03t12223Z Brassica rapa HOM05D000264 ORTHO05D000152 1.0e-07 60.5 45 62.2
AT4G03470 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 2.3e-07 59.3 197 27.4
Duzib212G1007 Durio zibethinus HOM05D000264 ORTHO05D000152 5.0e-07 58.2 96 35.4
AT4G03440 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 8.6e-07 57.4 46 54.3
A02p37150 Brassica napus HOM05D000264 ORTHO05D000152 1.5e-06 56.6 97 30.9
BraA02t08701Z Brassica rapa HOM05D000264 ORTHO05D000152 1.5e-06 56.6 97 30.9
BcaC01g06675 Brassica carinata HOM05D000264 ORTHO05D000152 9.5e-06 53.9 78 42.3


User provided reference genes

Program Settings