Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 1.3e-174 616.3 313 100.0
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 1.2e-151 540.0 313 87.2
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 2.1e-148 529.3 313 86.3
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 2.4e-144 515.8 313 83.7
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 9.0e-144 513.8 313 84.0
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 5.8e-143 511.1 323 80.8
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 7.6e-143 510.8 321 81.3
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 7.6e-143 510.8 321 81.3
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 3.2e-141 505.4 324 80.6
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 5.1e-139 498.0 315 81.9
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 7.6e-135 484.2 313 79.6
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 1.7e-126 456.4 291 81.4
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 4.7e-116 421.8 322 69.6
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 4.8e-97 358.6 321 58.3
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 2.5e-93 346.3 317 56.2
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 3.3e-93 345.9 315 56.2
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 2.1e-92 343.2 315 55.6
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 6.1e-92 341.7 313 57.8
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 6.1e-92 341.7 316 57.0
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 1.4e-91 340.5 289 59.2
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 3.0e-91 339.3 289 57.4
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 3.0e-91 339.3 313 57.5
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 4.0e-91 339.0 289 59.5
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 8.9e-91 337.8 313 57.2
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 2.0e-90 336.7 315 55.9
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 1.8e-88 330.1 302 56.0
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.4e-88 329.7 326 55.2
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 1.2e-87 327.4 315 52.7
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 4.5e-87 325.5 311 53.7
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 5.9e-87 325.1 289 56.1
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 2.3e-86 323.2 316 52.8
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 2.9e-86 322.8 346 50.9
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 8.6e-86 321.2 286 55.9
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.5e-85 320.5 286 56.6
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.5e-85 320.5 286 55.9
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 1.9e-85 320.1 308 55.2
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.9e-85 320.1 316 52.5
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 2.5e-85 319.7 314 53.2
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 3.3e-85 319.3 347 49.6
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 7.3e-85 318.2 316 52.2
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 2.1e-84 316.6 319 53.9
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 1.8e-83 313.5 288 55.9
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.3e-83 313.2 308 54.9
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 3.1e-83 312.8 299 53.8
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 6.8e-83 311.6 312 52.9
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 4.4e-82 308.9 315 52.1
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 5.8e-82 308.5 312 51.3
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 1.7e-81 307.0 260 58.1
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 1.7e-81 307.0 304 53.9
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 2.2e-81 306.6 316 52.5
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 2.9e-81 306.2 316 53.8
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 1.1e-80 304.3 297 53.5
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.4e-80 303.9 289 53.3
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 2.4e-80 303.1 285 56.5
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 2.4e-80 303.1 301 52.8
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 1.2e-79 300.8 294 51.7
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 3.5e-79 299.3 294 52.4
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 4.6e-79 298.9 279 54.1
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 4.6e-79 298.9 292 52.7
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 4.6e-79 298.9 331 48.6
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 7.8e-79 298.1 287 53.3
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 5.0e-78 295.4 293 52.6
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 6.6e-78 295.0 286 51.0
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.5e-77 293.9 288 51.7
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 1.9e-77 293.5 301 52.5
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 2.5e-77 293.1 326 49.4
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 3.3e-77 292.7 262 55.3
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 1.6e-76 290.4 324 50.9
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 8.0e-76 288.1 266 55.6
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 4.0e-75 285.8 283 51.2
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 5.2e-75 285.4 286 50.0
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 5.2e-75 285.4 288 51.4
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.5e-74 283.9 297 51.2
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 2.6e-74 283.1 235 60.9
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 3.4e-74 282.7 284 53.2
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 4.4e-74 282.3 319 47.6
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 1.3e-73 280.8 335 48.1
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 2.2e-73 280.0 263 56.3
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 4.9e-73 278.9 226 58.4
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 1.9e-72 276.9 260 50.0
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 9.2e-72 274.6 292 48.3
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.6e-71 273.9 295 49.8
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 2.7e-71 273.1 291 49.1
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 6.0e-71 271.9 290 51.4
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 3.9e-70 269.2 284 51.1
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 5.1e-70 268.9 333 45.6
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 4.3e-69 265.8 268 50.0
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 1.6e-68 263.8 291 47.8
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 3.6e-68 262.7 291 47.1
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 2.3e-67 260.0 234 54.7
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 3.1e-67 259.6 211 61.1
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 1.7e-65 253.8 284 46.8
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 9.2e-64 248.1 292 46.6
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 4.6e-63 245.7 289 45.7
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 9.9e-58 228.0 271 46.5
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 3.1e-51 206.5 237 46.4
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 6.9e-43 178.7 320 37.2
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 5.6e-37 159.1 136 52.9
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 2.8e-36 156.8 147 56.5
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 2.9e-33 146.7 137 52.6
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 5.6e-29 132.5 97 74.2
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 2.8e-28 130.2 140 51.4
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 4.0e-27 126.3 231 32.0
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 1.6e-23 114.4 107 58.9
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 6.1e-23 112.5 125 47.2
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 2.5e-21 107.1 255 31.0
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 5.5e-16 89.4 138 40.6
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 1.6e-15 87.8 113 43.4
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 1.9e-08 64.3 97 43.3
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 5.5e-08 62.8 97 42.3
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.6e-07 61.2 286 24.5
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 7.9e-07 58.9 286 24.1
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 1.4e-06 58.2 214 25.2
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.8e-06 57.8 286 24.1
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 1.8e-06 57.8 219 23.7
Cre01.g055469 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 5.1e-06 56.2 138 26.1
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 5.1e-06 56.2 271 23.2
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 5.1e-06 56.2 285 24.6
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 8.8e-06 55.5 86 39.5


User provided reference genes

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