Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g02010 Schrenkiella parvula HOM05D006128 ORTHO05D007466 2.0e-122 442.6 242 100.0
Carub.0004s0574 Capsella rubella HOM05D006128 ORTHO05D007466 1.4e-96 356.7 250 79.2
AT2G25920 Arabidopsis thaliana HOM05D006128 ORTHO05D007466 1.0e-94 350.5 249 78.3
Thhalv10028896m.g Eutrema salsugineum HOM05D006128 ORTHO05D007466 1.5e-93 346.7 258 82.2
BcaB01g02428 Brassica carinata HOM05D006128 ORTHO05D007466 4.3e-93 345.1 261 75.9
AL4G17994 Arabidopsis lyrata HOM05D006128 ORTHO05D007466 8.1e-92 340.9 244 76.6
BraA03t12299Z Brassica rapa HOM05D006128 ORTHO05D007466 2.0e-90 336.3 257 77.0
A03p31200 Brassica napus HOM05D006128 ORTHO05D007466 5.8e-90 334.7 257 76.7
BcaC01g06774 Brassica carinata HOM05D006128 ORTHO05D007466 1.1e-88 330.5 260 75.0
C03p38040 Brassica napus HOM05D006128 ORTHO05D007466 1.1e-88 330.5 260 75.0
BolC3t16089H Brassica oleracea HOM05D006128 ORTHO05D007466 1.1e-88 330.5 260 75.0
CARHR290840 Cardamine hirsuta HOM05D006128 ORTHO05D007466 8.7e-78 294.3 248 69.8
THA.LOC104801298 Tarenaya hassleriana HOM05D006128 ORTHO05D007466 3.0e-70 269.2 238 66.4
Glyma.02G014100 Glycine max HOM05D006128 ORTHO05D007466 4.8e-60 235.3 228 61.4
FAN13G2048 Fragaria x ananassa HOM05D006128 ORTHO05D007466 4.1e-59 232.3 255 57.6
Potri.014G122900 Populus trichocarpa HOM05D006128 ORTHO05D007466 5.3e-59 231.9 258 55.8
Cfa005831 Carpinus fangiana HOM05D006128 ORTHO05D007466 1.2e-58 230.7 261 55.6
FAN04G2463 Fragaria x ananassa HOM05D006128 ORTHO05D007466 1.2e-58 230.7 255 57.3
CSS0018421 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 1.5e-58 230.3 259 55.6
CSS0035054 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 1.5e-58 230.3 259 55.6
Aa31LG5G1800 Aethionema arabicum HOM05D004824 ORTHO05D007466 2.0e-58 229.9 300 52.7
FvH4_5g39570 Fragaria vesca HOM05D006128 ORTHO05D007466 2.0e-58 229.9 255 57.3
Ca_10299_v3 Cicer arietinum L. HOM05D006128 ORTHO05D007466 2.6e-58 229.6 241 60.2
Manes.05G001900 Manihot esculenta HOM05D006128 ORTHO05D007466 3.4e-58 229.2 253 55.7
FAN18G2733 Fragaria x ananassa HOM05D006128 ORTHO05D007466 4.5e-58 228.8 243 57.6
Phvul.007G216000 Phaseolus vulgaris HOM05D006128 ORTHO05D007466 7.6e-58 228.0 231 60.2
Prupe.8G269800 Prunus persica HOM05D006128 ORTHO05D007466 1.3e-57 227.3 242 57.9
FAN08G0466 Fragaria x ananassa HOM05D006128 ORTHO05D007466 2.2e-57 226.5 261 55.6
Hma1.2p1_1302F.1_g274310 Hydrangea macrophylla HOM05D006128 ORTHO05D007466 3.8e-57 225.7 225 59.6
Gohir.D08G051000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 5.0e-57 225.3 265 55.1
Gorai.004G050700 Gossypium raimondii HOM05D006128 ORTHO05D007466 8.4e-57 224.6 265 55.1
Duzib138G0044 Durio zibethinus HOM05D006128 ORTHO05D007466 1.4e-56 223.8 263 55.9
Medtr1g087500 Medicago truncatula HOM05D006128 ORTHO05D007466 1.4e-56 223.8 262 56.5
Cpa.g.sc18.8 Carica papaya HOM05D006128 ORTHO05D007466 1.9e-56 223.4 243 58.0
Lj5g0013562 Lotus japonicus HOM05D006128 ORTHO05D007466 1.9e-56 223.4 260 55.0
Haze_05012 Corylus avellana HOM05D006128 ORTHO05D007466 2.5e-56 223.0 259 54.8
Potri.002G198400 Populus trichocarpa HOM05D006128 ORTHO05D007466 2.5e-56 223.0 247 55.1
TPR.G19756 Trifolium pratense HOM05D006128 ORTHO05D007466 2.5e-56 223.0 260 55.8
Cc08_g11810 Coffea canephora HOM05D006128 ORTHO05D007466 5.5e-56 221.9 265 54.3
Psat6g163320 Pisum sativum HOM05D006128 ORTHO05D007466 5.5e-56 221.9 263 55.1
VMungo0720G2147 Vigna mungo HOM05D006128 ORTHO05D007466 5.5e-56 221.9 231 59.3
Atru.chr5.1049 Acer truncatum HOM05D006128 ORTHO05D007466 7.2e-56 221.5 265 54.0
Manes.01G226000 Manihot esculenta HOM05D006128 ORTHO05D007466 4.6e-55 218.8 287 50.9
QL12p028969 Quercus lobata HOM05D006128 ORTHO05D007466 4.6e-55 218.8 248 55.6
CAN.G69.3 Capsicum annuum HOM05D006128 ORTHO05D007466 7.9e-55 218.0 267 53.6
MD03G1297200 Malus domestica HOM05D006128 ORTHO05D007466 1.0e-54 217.6 241 56.0
Nn3g21633 Nelumbo nucifera HOM05D006128 ORTHO05D007466 3.0e-54 216.1 240 55.0
Nitab4.5_0000906g0110 Nicotiana tabacum HOM05D006128 ORTHO05D007466 3.0e-54 216.1 262 53.4
GSVIVG01028088001 Vitis vinifera HOM05D006128 ORTHO05D007466 3.0e-54 216.1 255 54.5
Gorai.007G124300 Gossypium raimondii HOM05D006128 ORTHO05D007466 3.9e-54 215.7 259 54.1
Nitab4.5_0000116g0090 Nicotiana tabacum HOM05D006128 ORTHO05D007466 8.7e-54 214.5 243 55.1
TWI36G0171 Tripterygium wilfordii HOM05D006128 ORTHO05D007466 1.1e-53 214.2 265 50.9
CiPaw.07G115100 Carya illinoinensis HOM05D006128 ORTHO05D007466 1.9e-53 213.4 268 54.5
Ciclev10021788m.g Citrus clementina HOM05D006128 ORTHO05D007466 2.5e-53 213.0 266 53.0
Gohir.A08G040900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 3.3e-53 212.6 259 53.3
vmacro15124 Vaccinium macrocarpon HOM05D006128 ORTHO05D007466 3.3e-53 212.6 263 52.9
arahy.Tifrunner.gnm1.ann1.G5X8S7 Arachis hypogaea HOM05D006128 ORTHO05D007466 4.3e-53 212.2 229 58.1
Sabra14G0091300 Salix brachista HOM05D006128 ORTHO05D007466 4.3e-53 212.2 255 53.3
COL.COLO4_23260 Corchorus olitorius HOM05D006128 ORTHO05D007466 5.7e-53 211.8 233 57.1
Actinidia25836 Actinidia chinensis HOM05D006128 ORTHO05D007466 7.4e-53 211.5 266 51.9
EL10As5g23499 Beta vulgaris HOM05D006128 ORTHO05D007466 1.3e-52 210.7 227 57.3
Gohir.A12G126500 Gossypium hirsutum HOM05D006128 ORTHO05D007466 1.3e-52 210.7 196 63.3
Sabra02G0159200 Salix brachista HOM05D002340 ORTHO05D003624 1.3e-52 210.7 251 53.0
CARHR290820 Cardamine hirsuta HOM05D006128 ORTHO05D007466 1.6e-52 210.3 201 64.2
Lalb_Chr02g0146681 Lupinus albus HOM05D006128 ORTHO05D007466 1.6e-52 210.3 258 52.7
MD11G1317000 Malus domestica HOM05D006128 ORTHO05D007466 1.6e-52 210.3 241 54.4
Gorai.008G141200 Gossypium raimondii HOM05D006128 ORTHO05D007466 3.7e-52 209.1 211 59.7
Gohir.D12G130000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 1.1e-51 207.6 211 59.2
Hund09615 Selenicereus undatus HOM05D006128 ORTHO05D007466 1.1e-51 207.6 244 54.1
Sopen01g031420 Solanum pennellii HOM05D006128 ORTHO05D007466 1.1e-51 207.6 275 50.9
Peaxi162Scf00001g00252 Petunia axillaris HOM05D006128 ORTHO05D007466 1.4e-51 207.2 240 55.8
Lj1A19T25 Lonicera japonica HOM05D006128 ORTHO05D007466 1.8e-51 206.8 244 53.3
CsaV3_4G001120 Cucumis sativus L. HOM05D006128 ORTHO05D007466 3.1e-51 206.1 264 51.1
Sed0005948 Sechium edule HOM05D006128 ORTHO05D007466 3.1e-51 206.1 249 53.0
MELO3C032866.2 Cucumis melo HOM05D006128 ORTHO05D007466 5.3e-51 205.3 266 50.8
HanXRQChr15g0464211 Helianthus annuus HOM05D006128 ORTHO05D007466 6.9e-51 204.9 227 55.9
Rhsim01G0289400 Rhododendron simsii HOM05D006128 ORTHO05D007466 6.9e-51 204.9 309 46.6
arahy.Tifrunner.gnm1.ann1.M4G7E6 Arachis hypogaea HOM05D006128 ORTHO05D007466 1.2e-50 204.1 253 53.4
Solyc01g079640.4 Solanum lycopersicum HOM05D006128 ORTHO05D007466 2.0e-50 203.4 261 52.1
PGSC0003DMG400009003 Solanum tuberosum HOM05D006128 ORTHO05D007466 3.4e-50 202.6 274 50.0
PSO357G0491 Papaver somniferum HOM05D006128 ORTHO05D007466 5.0e-49 198.7 215 56.7
TAR633G2533 Trochodendron aralioides HOM05D006128 ORTHO05D007466 5.0e-49 198.7 247 51.0
PSO170G2201 Papaver somniferum HOM05D006128 ORTHO05D007466 1.1e-48 197.6 215 55.8
DCAR_002874 Daucus carota HOM05D006128 ORTHO05D007466 1.9e-48 196.8 244 52.0
MBI19_g22894_MAGBIO Magnolia biondii HOM05D006128 ORTHO05D007466 1.9e-48 196.8 252 51.2
TAR362G1032 Trochodendron aralioides HOM05D006128 ORTHO05D007466 1.9e-48 196.8 249 49.4
Glyma.10G014800 Glycine max HOM05D006128 ORTHO05D007466 3.2e-48 196.1 229 59.4
ECA236G3461 Erigeron canadensis HOM05D001958 ORTHO05D001971 5.5e-48 195.3 193 58.0
SGA_v2.0_scaffold376G50266 Striga asiatica HOM05D006128 ORTHO05D007466 2.7e-47 193.0 177 62.7
Migut.D00098 Erythranthe guttata HOM05D006128 ORTHO05D007466 6.1e-47 191.8 248 51.6
Dinv33101 Davidia involucrata HOM05D006128 ORTHO05D007466 2.5e-45 186.4 218 53.7
PGR044G1105 Punica granatum HOM05D006128 ORTHO05D007466 5.7e-45 185.3 273 48.0
Ah.02g112110 Amaranthus hybridus HOM05D006128 ORTHO05D007466 7.4e-45 184.9 226 54.0
Oeu008455.2 Olea europaea HOM05D006128 ORTHO05D007466 1.7e-44 183.7 210 54.8
unitig_52.g16838 Utricularia gibba HOM05D006128 ORTHO05D007466 7.7e-42 174.9 177 64.4
HPP92_016959 Vanilla planifolia HOM05D006128 ORTHO05D007466 1.3e-41 174.1 230 48.7
Zm00001eb345660 Zea mays HOM05D006128 ORTHO05D007466 1.3e-41 174.1 200 56.5
Aqoxy2G02213 Aquilegia oxysepala HOM05D006128 ORTHO05D007466 8.5e-41 171.4 228 52.2
Duzib133G0480 Durio zibethinus HOM05D006128 ORTHO05D007466 2.5e-40 169.9 188 57.4
CANSAT35G0097 Cannabis sativa HOM05D006128 ORTHO05D007466 4.2e-40 169.1 267 44.9
Thecc.01G310500 Theobroma cacao HOM05D006128 ORTHO05D007466 1.2e-39 167.5 219 51.6
CDE11G0626 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 3.6e-39 166.0 227 46.7
AUR62024680 Chenopodium quinoa HOM05D006128 ORTHO05D007466 2.6e-37 159.8 188 53.7
CDE05G1506 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 4.4e-37 159.1 241 44.4
A03p31210 Brassica napus HOM05D000040 ORTHO05D000267 9.7e-37 157.9 154 64.9
AUR62011838 Chenopodium quinoa HOM05D006128 ORTHO05D007466 1.3e-36 157.5 188 53.2
Sc18g0005360 Simmondsia chinensis HOM05D006128 ORTHO05D007466 3.7e-36 156.0 205 49.3
Os05g0156200 Oryza sativa ssp. japonica HOM05D006128 ORTHO05D007466 6.3e-36 155.2 173 54.9
Lsat_1_v5_gn_8_166381 Lactuca sativa HOM05D001134 ORTHO05D001035 1.1e-35 154.5 153 65.4
Gohir.A11G110900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 1.2e-34 151.0 217 49.3
RcHm_v2.0_Chr7g0241881 Rosa chinensis HOM05D006128 ORTHO05D007466 2.6e-34 149.8 198 50.5
ClCG10G011230 Citrullus lanatus HOM05D006128 ORTHO05D007466 7.7e-34 148.3 421 32.1
Eucgr.K03529 Eucalyptus grandis HOM05D006128 ORTHO05D007466 1.5e-32 144.1 192 49.5
Zm00001eb340800 Zea mays HOM05D006128 ORTHO05D007466 9.4e-32 141.4 240 40.4
ATR0706G106 Amborella trichopoda HOM05D006128 ORTHO05D007466 2.3e-30 136.7 194 48.5
CSS0004097 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 8.8e-30 134.8 184 47.8
CARHR290830 Cardamine hirsuta HOM05D006128 ORTHO05D007466 1.4e-27 127.5 193 47.2
Gohir.D11G116100 Gossypium hirsutum HOM05D006128 ORTHO05D007466 1.6e-26 124.0 185 46.5
Pp3c13_5550 Physcomitrium patens HOM05D006128 ORTHO05D007466 1.6e-23 114.0 261 38.7
Mapoly0184s0013 Marchantia polymorpha HOM05D006128 ORTHO05D007466 1.2e-21 107.8 235 38.3
Lalb_Chr21g0309471 Lupinus albus HOM05D006128 ORTHO05D007466 2.0e-18 97.1 225 36.4
AagrBONN_evm.TU.Sc2ySwM_228.1223 Anthoceros agrestis HOM05D006128 ORTHO05D007466 1.0e-17 94.7 204 38.2
Sc18g0005490 Simmondsia chinensis HOM05D006128 ORTHO05D007466 1.0e-17 94.7 133 49.6
SHI19763 Sapria himalayana HOM05D006128 ORTHO05D007466 1.3e-17 94.4 132 45.5
RcHm_v2.0_Chr7g0241891 Rosa chinensis HOM05D006128 ORTHO05D007466 6.1e-15 85.5 51 80.4
SHI19767 Sapria himalayana HOM05D006128 ORTHO05D007466 2.6e-13 80.1 71 63.4
C03p38050 Brassica napus HOM05D006128 ORTHO05D007466 7.5e-13 78.6 52 84.6
Pp3c3_2220 Physcomitrium patens HOM05D006128 ORTHO05D007466 7.5e-13 78.6 154 41.6
MSTRG.18115 Avicennia marina HOM05D006128 ORTHO05D007466 1.4e-11 74.3 116 44.0
BolC3t16090H Brassica oleracea HOM05D006128 ORTHO05D007466 1.8e-11 73.9 46 87.0
Oeu047380.1 Olea europaea HOM05D006128 ORTHO05D007466 4.1e-11 72.8 75 53.3
BraA03t12301Z Brassica rapa HOM05D006128 ORTHO05D007466 2.0e-10 70.5 46 84.8
SEGI_18845 Sequoiadendron giganteum HOM05D006128 ORTHO05D007466 2.5e-08 63.5 98 43.9


User provided reference genes

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