Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 2.1e-103 379.0 194 100.0
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 4.6e-98 361.3 193 95.3
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 1.1e-91 340.1 193 89.6
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 5.5e-91 337.8 194 90.7
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 7.2e-91 337.4 194 91.2
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 2.1e-90 335.9 194 90.2
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 4.6e-90 334.7 194 89.7
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 4.6e-90 334.7 195 91.3
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 2.3e-89 332.4 194 88.7
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 3.9e-89 331.6 195 90.8
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 3.9e-89 331.6 195 90.8
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 1.2e-82 310.1 189 84.1
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 1.4e-81 306.6 194 84.0
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 4.4e-64 248.4 187 71.7
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 7.5e-64 247.7 129 96.9
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 1.1e-62 243.8 187 70.1
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 2.4e-62 242.7 187 67.9
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 2.0e-61 239.6 190 66.8
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 4.5e-61 238.4 189 70.4
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 2.2e-60 236.1 190 67.9
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 5.0e-60 235.0 188 67.0
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 3.2e-59 232.3 189 65.1
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 4.2e-59 231.9 194 65.5
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 9.4e-59 230.7 188 65.4
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.6e-58 229.9 189 65.1
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 2.7e-58 229.2 194 63.4
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 2.7e-58 229.2 198 65.2
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 4.7e-58 228.4 188 64.9
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 8.0e-58 227.6 187 65.2
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 1.0e-57 227.3 188 66.0
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 2.3e-57 226.1 191 65.4
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 4.0e-57 225.3 150 76.0
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 5.2e-57 224.9 188 64.9
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 6.8e-57 224.6 189 64.0
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 8.8e-57 224.2 186 65.6
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 8.8e-57 224.2 140 81.4
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 1.2e-56 223.8 150 75.3
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 2.0e-56 223.0 187 62.6
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 2.6e-56 222.6 160 73.8
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 3.4e-56 222.2 140 79.3
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 7.5e-56 221.1 154 73.4
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 9.8e-56 220.7 189 63.5
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 9.8e-56 220.7 196 62.2
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 1.7e-55 219.9 187 62.0
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 1.7e-55 219.9 132 83.3
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 6.3e-55 218.0 194 63.4
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 1.1e-54 217.2 198 62.6
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.4e-54 216.9 197 60.4
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.4e-54 216.9 132 81.1
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 2.4e-54 216.1 154 70.8
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 3.1e-54 215.7 168 69.0
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 3.1e-54 215.7 154 70.8
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 3.1e-54 215.7 145 75.9
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 4.1e-54 215.3 149 74.5
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 4.1e-54 215.3 132 81.1
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 4.1e-54 215.3 132 81.1
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 7.0e-54 214.5 163 69.9
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 7.0e-54 214.5 129 80.6
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 9.2e-54 214.2 181 66.3
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 1.2e-53 213.8 193 62.2
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 2.0e-53 213.0 192 60.9
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 2.0e-53 213.0 133 78.2
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 2.7e-53 212.6 138 76.1
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 4.5e-53 211.8 131 77.9
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.5e-53 211.8 181 64.6
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 7.7e-53 211.1 188 61.2
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 1.3e-52 210.3 132 78.8
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 2.3e-52 209.5 153 70.6
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 1.5e-51 206.8 196 62.2
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 1.9e-51 206.5 205 58.5
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 5.6e-51 204.9 134 77.6
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 5.6e-51 204.9 144 68.8
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 6.1e-50 201.4 134 73.9
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.0e-49 200.7 219 53.4
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 1.4e-49 200.3 191 61.8
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 1.4e-49 200.3 219 53.4
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 4.0e-49 198.7 138 75.4
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 4.0e-49 198.7 167 64.7
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 6.8e-49 198.0 157 67.5
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 2.6e-48 196.1 224 52.2
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 7.5e-48 194.5 123 74.0
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 1.7e-47 193.4 181 59.1
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 1.7e-47 193.4 165 63.0
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 4.9e-47 191.8 156 66.0
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 5.4e-46 188.3 145 69.7
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 7.0e-46 188.0 169 61.5
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 7.0e-46 188.0 126 73.0
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 2.2e-39 166.4 95 87.4
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 6.4e-39 164.9 177 55.4
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 5.4e-38 161.8 114 69.3
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 9.2e-38 161.0 83 97.6
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 2.0e-37 159.8 167 56.3
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 2.7e-37 159.5 110 74.5
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 3.5e-37 159.1 99 80.8
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 2.3e-36 156.4 95 81.1
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 3.0e-36 156.0 140 63.6
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 1.5e-35 153.7 99 80.8
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 1.2e-34 150.6 95 80.0
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 1.2e-34 150.6 101 75.2
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 8.9e-33 144.4 99 75.8
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 3.4e-32 142.5 152 56.6
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 4.1e-30 135.6 137 48.9
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 2.1e-29 133.3 166 47.6
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 3.5e-29 132.5 104 66.3
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 4.6e-29 132.1 99 65.7
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 1.2e-26 124.0 162 45.1
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 5.8e-24 115.2 71 84.5
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 5.8e-24 115.2 71 84.5
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 7.6e-24 114.8 78 71.8
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.2e-21 107.5 68 73.5
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 2.5e-19 99.8 73 65.8
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.1e-18 96.7 63 77.8
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 1.8e-17 93.6 71 70.4
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 2.4e-17 93.2 109 39.4
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 2.1e-13 80.1 39 94.9
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 2.1e-13 80.1 39 94.9


User provided reference genes

Program Settings