Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.1e-54 216.5 111 100.0
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 6.6e-49 197.2 109 90.8
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 6.6e-49 197.2 109 90.8
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 1.3e-44 183.0 108 87.0
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 1.3e-44 183.0 108 87.0
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 1.4e-43 179.5 108 84.3
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 1.4e-43 179.5 108 85.2
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 1.4e-43 179.5 108 85.2
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 1.9e-43 179.1 108 85.2
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 1.2e-42 176.4 109 84.4
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 2.7e-42 175.3 111 83.8
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 3.9e-41 171.4 108 82.4
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 1.3e-39 166.4 112 79.5
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 2.1e-39 165.6 111 80.2
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 1.5e-37 159.5 107 76.6
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 1.9e-35 152.5 117 67.5
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 2.2e-28 129.0 106 57.5
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 3.8e-28 128.3 115 55.7
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 6.4e-28 127.5 115 57.4
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 4.2e-27 124.8 119 52.1
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 4.2e-27 124.8 117 49.6
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 7.1e-27 124.0 109 53.2
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 7.1e-27 124.0 109 53.2
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 7.1e-27 124.0 109 53.2
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 1.2e-26 123.2 117 51.3
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 1.6e-26 122.9 118 52.5
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 2.1e-26 122.5 116 50.0
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 2.7e-26 122.1 118 51.7
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 3.5e-26 121.7 119 50.4
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 6.0e-26 120.9 117 51.3
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 7.9e-26 120.6 119 50.4
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 1.0e-25 120.2 109 51.4
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 1.0e-25 120.2 116 54.3
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 1.3e-25 119.8 114 50.0
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 1.3e-25 119.8 117 49.6
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 1.3e-25 119.8 112 52.7
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 1.3e-25 119.8 119 50.4
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.8e-25 119.4 109 54.1
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 3.0e-25 118.6 116 50.0
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 3.0e-25 118.6 109 52.3
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 3.0e-25 118.6 109 52.3
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 3.0e-25 118.6 107 55.1
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 3.0e-25 118.6 119 47.9
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 5.1e-25 117.9 119 49.6
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 5.1e-25 117.9 116 50.0
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 6.7e-25 117.5 109 51.4
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 6.7e-25 117.5 116 50.0
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 8.7e-25 117.1 119 47.9
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.1e-24 116.7 120 51.7
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.1e-24 116.7 124 50.8
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 1.5e-24 116.3 117 45.3
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 1.5e-24 116.3 116 50.0
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 1.9e-24 115.9 116 50.0
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 1.9e-24 115.9 117 50.4
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 2.5e-24 115.5 120 46.7
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 4.3e-24 114.8 120 44.2
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 4.3e-24 114.8 121 48.8
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 5.6e-24 114.4 117 46.2
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 5.6e-24 114.4 111 49.5
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 7.4e-24 114.0 117 47.9
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 9.6e-24 113.6 112 46.4
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 9.6e-24 113.6 99 50.5
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.3e-23 113.2 113 50.4
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 1.3e-23 113.2 121 51.2
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.3e-23 113.2 121 51.2
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 1.3e-23 113.2 117 47.0
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 1.6e-23 112.8 105 50.5
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.6e-23 112.8 115 52.2
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.6e-23 112.8 115 51.3
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 1.6e-23 112.8 118 45.8
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 1.6e-23 112.8 118 45.8
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 2.1e-23 112.5 123 51.2
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 2.8e-23 112.1 105 50.5
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 2.8e-23 112.1 105 50.5
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 3.7e-23 111.7 116 48.3
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 3.7e-23 111.7 105 50.5
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 3.7e-23 111.7 124 46.0
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 4.8e-23 111.3 118 45.8
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 6.2e-23 110.9 117 47.9
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 6.2e-23 110.9 119 42.9
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 8.2e-23 110.5 101 51.5
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 8.2e-23 110.5 115 52.2
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 1.1e-22 110.2 115 46.1
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 1.1e-22 110.2 119 42.9
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 1.1e-22 110.2 115 48.7
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 1.8e-22 109.4 118 44.9
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 2.4e-22 109.0 116 43.1
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 3.1e-22 108.6 116 46.6
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 3.1e-22 108.6 105 48.6
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 4.0e-22 108.2 112 50.0
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 9.0e-22 107.1 115 48.7
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 1.2e-21 106.7 116 47.4
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 1.2e-21 106.7 112 50.0
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 2.0e-21 105.9 105 47.6
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 2.6e-21 105.5 118 49.2
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 3.4e-21 105.1 118 44.9
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 3.4e-21 105.1 127 43.3
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 4.5e-21 104.8 104 51.0
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 1.0e-20 103.6 129 41.9
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 1.0e-20 103.6 110 47.3
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 2.2e-20 102.4 112 48.2
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 1.9e-19 99.4 106 47.2
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 3.2e-19 98.6 101 51.5
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 3.5e-18 95.1 118 47.5
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 3.5e-18 95.1 73 58.9
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 1.0e-17 93.6 91 53.8
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 2.5e-16 89.0 74 52.7
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 4.8e-15 84.7 123 39.8
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 2.1e-10 69.3 122 37.7
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 3.1e-06 55.5 131 31.3


User provided reference genes

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