Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g00770 Schrenkiella parvula HOM05D002977 ORTHO05D003225 4.4e-242 840.9 427 100.0
Thhalv10029270m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 8.4e-185 650.6 434 81.1
AL6G52680 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 2.4e-179 632.5 430 77.9
Carub.0006s3643 Capsella rubella HOM05D002977 ORTHO05D003225 6.9e-179 630.9 429 77.4
AT4G00770 Arabidopsis thaliana HOM05D002977 ORTHO05D003225 1.5e-173 613.2 425 76.9
CARHR248960 Cardamine hirsuta HOM05D002977 ORTHO05D003225 2.2e-172 609.4 429 75.1
BcaC01g06858 Brassica carinata HOM05D002977 ORTHO05D003225 2.3e-166 589.3 430 76.5
A03p32000 Brassica napus HOM05D002977 ORTHO05D003225 7.4e-165 584.3 427 76.1
C03p39020 Brassica napus HOM05D002977 ORTHO05D003225 9.7e-165 583.9 430 76.3
BolC3t16174H Brassica oleracea HOM05D002977 ORTHO05D003225 9.7e-165 583.9 430 76.3
BcaB01g02155 Brassica carinata HOM05D002977 ORTHO05D003225 8.2e-164 580.9 432 76.9
BraA03t12372Z Brassica rapa HOM05D002977 ORTHO05D003225 1.8e-163 579.7 428 75.9
Aa31LG5G240 Aethionema arabicum HOM05D002977 ORTHO05D003225 1.7e-145 520.0 473 65.1
THA.LOC104801463 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 1.5e-125 453.8 449 59.7
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 7.7e-53 212.2 473 37.0
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 5.0e-52 209.5 448 39.3
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 5.5e-51 206.1 457 37.2
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 8.8e-49 198.7 468 36.3
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 1.1e-48 198.4 462 38.1
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 7.4e-48 195.7 399 40.1
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 6.3e-47 192.6 452 36.1
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 8.2e-47 192.2 468 35.3
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 1.5e-45 188.0 435 38.2
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 2.0e-45 187.6 484 35.1
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 5.9e-45 186.0 473 35.1
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.3e-44 184.9 455 35.2
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 1.7e-44 184.5 458 37.1
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 3.8e-44 183.3 505 35.2
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 3.8e-44 183.3 456 34.9
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 1.9e-43 181.0 441 38.1
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 3.2e-43 180.3 480 34.2
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 1.0e-41 175.3 439 38.5
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.4e-41 174.9 454 35.2
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 4.4e-40 169.9 458 34.5
FAN06G4128 Fragaria x ananassa HOM05D002977 ORTHO05D003225 6.3e-39 166.0 464 34.5
Glyma.07G079500 Glycine max HOM05D002977 ORTHO05D003225 1.2e-34 151.8 445 34.4
CANSAT56G0238 Cannabis sativa HOM05D002977 ORTHO05D003225 2.1e-34 151.0 466 33.3
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 2.7e-34 150.6 449 32.3
Glyma.03G017800 Glycine max HOM05D002977 ORTHO05D003225 2.3e-33 147.5 446 33.0
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 3.9e-33 146.7 482 31.7
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 2.0e-32 144.4 454 31.9
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.0e-32 144.4 472 31.6
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 6.3e-31 139.4 450 32.7
VMungo0331G1467 Vigna mungo HOM05D002977 ORTHO05D003225 2.4e-30 137.5 446 32.1
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 4.1e-30 136.7 464 31.9
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 2.0e-29 134.4 494 31.4
Gohir.A08G129200 Gossypium hirsutum HOM05D002977 ORTHO05D003225 4.5e-29 133.3 452 31.0
Ciclev10020246m.g Citrus clementina HOM05D002977 ORTHO05D003225 1.7e-28 131.3 477 32.7
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.7e-28 131.3 452 30.3
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 5.0e-28 129.8 452 29.9
Medtr8g032770 Medicago truncatula HOM05D002977 ORTHO05D003225 1.5e-27 128.3 458 33.0
Ca_23758_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 3.2e-27 127.1 447 31.3
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 3.2e-27 127.1 453 31.6
Phvul.010G089700 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 5.5e-27 126.3 354 33.9
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 9.4e-27 125.6 448 33.5
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 6.1e-26 122.9 411 31.9
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 8.0e-26 122.5 486 31.9
Manes.01G067700 Manihot esculenta HOM05D002977 ORTHO05D003225 1.0e-25 122.1 475 31.2
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 4.0e-25 120.2 450 31.1
Psat4g151680 Pisum sativum HOM05D002977 ORTHO05D003225 1.2e-24 118.6 454 31.3
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 3.4e-24 117.1 455 32.7
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 3.4e-24 117.1 451 32.6
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 5.7e-24 116.3 455 29.7
Eucgr.E00281 Eucalyptus grandis HOM05D002977 ORTHO05D003225 1.7e-23 114.8 444 30.0
Dinv37695 Davidia involucrata HOM05D002977 ORTHO05D003225 3.7e-23 113.6 468 30.1
Actinidia02049 Actinidia chinensis HOM05D002977 ORTHO05D003225 1.8e-22 111.3 482 30.5
Cc08_g13950 Coffea canephora HOM05D002977 ORTHO05D003225 3.1e-22 110.5 484 30.0
Manes.05G040400 Manihot esculenta HOM05D002977 ORTHO05D003225 3.1e-22 110.5 461 30.8
Sopen01g037600 Solanum pennellii HOM05D002977 ORTHO05D003225 3.1e-22 110.5 447 29.1
arahy.Tifrunner.gnm1.ann1.YQQF81 Arachis hypogaea HOM05D002977 ORTHO05D003225 7.0e-22 109.4 465 29.0
Duzib133G0091 Durio zibethinus HOM05D002977 ORTHO05D003225 7.0e-22 109.4 241 35.3
Thecc.03G270800 Theobroma cacao HOM05D002977 ORTHO05D003225 9.1e-22 109.0 492 30.1
TWI14G0163 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.2e-21 108.6 454 29.3
arahy.Tifrunner.gnm1.ann1.XNH79U Arachis hypogaea HOM05D002977 ORTHO05D003225 4.5e-21 106.7 465 28.8
Prupe.5G089800 Prunus persica HOM05D002977 ORTHO05D003225 4.5e-21 106.7 491 28.7
Lsat_1_v5_gn_7_8261 Lactuca sativa HOM05D002977 ORTHO05D003225 1.0e-20 105.5 440 30.5
Duzib084G1184 Durio zibethinus HOM05D002977 ORTHO05D003225 1.7e-20 104.8 493 28.6
Lalb_Chr10g0097561 Lupinus albus HOM05D002977 ORTHO05D003225 1.7e-20 104.8 446 29.6
Lj3g0026127 Lotus japonicus HOM05D002977 ORTHO05D003225 5.0e-20 103.2 451 31.7
Solyc01g091830.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 2.5e-19 100.9 446 29.4
CAN.G170.54 Capsicum annuum HOM05D002977 ORTHO05D003225 9.4e-19 99.0 468 29.1
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 3.6e-18 97.1 466 28.1
Sabra03G0085100 Salix brachista HOM05D002977 ORTHO05D003225 3.6e-18 97.1 478 27.8
MSTRG.25572 Avicennia marina HOM05D002977 ORTHO05D003225 8.0e-18 95.9 454 26.7
SGA_v2.0_scaffold286G47104 Striga asiatica HOM05D002977 ORTHO05D003225 1.0e-17 95.5 440 28.6
A02p24230 Brassica napus HOM05D002977 ORTHO05D040183 1.4e-17 95.1 123 58.5
Nitab4.5_0000134g0230 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.8e-17 94.7 449 30.5
Potri.001G110900 Populus trichocarpa HOM05D002977 ORTHO05D003225 2.3e-17 94.4 472 28.2
Potri.003G121100 Populus trichocarpa HOM05D002977 ORTHO05D003225 4.0e-17 93.6 484 28.9
CiPaw.02G024700 Carya illinoinensis HOM05D002977 ORTHO05D003225 5.2e-17 93.2 236 33.5
Manes.01G262800 Manihot esculenta HOM05D002977 ORTHO05D003225 5.2e-17 93.2 259 39.0
Duzib205G0359 Durio zibethinus HOM05D002977 ORTHO05D003225 8.8e-17 92.4 487 27.7
MBI12_g11809_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 8.8e-17 92.4 464 28.2
Sopen08g028630 Solanum pennellii HOM05D002977 ORTHO05D003225 8.8e-17 92.4 484 29.3
AUR62010660 Chenopodium quinoa HOM05D002977 ORTHO05D003225 1.2e-16 92.0 470 27.0
Gorai.004G207700 Gossypium raimondii HOM05D002977 ORTHO05D003225 1.2e-16 92.0 476 27.3
Gohir.A08G178500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.5e-16 91.7 477 26.6
Haze_08955 Corylus avellana HOM05D002977 ORTHO05D003225 2.0e-16 91.3 492 29.3
Cc02_g37200 Coffea canephora HOM05D002977 ORTHO05D003225 5.7e-16 89.7 448 27.7
MBI04_g42596_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 7.5e-16 89.4 469 28.6
Actinidia14518 Actinidia chinensis HOM05D000078 ORTHO05D003225 2.8e-15 87.4 343 32.7
Peaxi162Scf00714g00621 Petunia axillaris HOM05D002977 ORTHO05D003225 2.8e-15 87.4 482 27.0
QL12p017099 Quercus lobata HOM05D002977 ORTHO05D003225 2.8e-15 87.4 507 26.4
MSTRG.20788 Avicennia marina HOM05D002977 ORTHO05D003225 3.7e-15 87.0 422 30.6
Oeu059227.1 Olea europaea HOM05D002977 ORTHO05D003225 3.7e-15 87.0 340 33.5
Cfa012096 Carpinus fangiana HOM05D002524 ORTHO05D002718 4.9e-15 86.7 485 29.3
PGR042G2435 Punica granatum HOM05D002977 ORTHO05D003225 4.9e-15 86.7 455 27.0
CAN.G981.38 Capsicum annuum HOM05D002977 ORTHO05D003225 6.3e-15 86.3 487 26.9
HanXRQChr06g0168991 Helianthus annuus HOM05D002977 ORTHO05D003225 6.3e-15 86.3 358 27.4
CiPaw.11G141500 Carya illinoinensis HOM05D002977 ORTHO05D003225 8.3e-15 85.9 489 28.6
Oeu059228.1 Olea europaea HOM05D002977 ORTHO05D003225 8.3e-15 85.9 340 34.1
TWI81G0253 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 8.3e-15 85.9 488 27.3
Hund16963 Selenicereus undatus HOM05D002977 ORTHO05D003225 1.4e-14 85.1 374 30.7
Migut.E01299 Erythranthe guttata HOM05D002977 ORTHO05D003225 1.8e-14 84.7 453 25.6
Ah.02g116430 Amaranthus hybridus HOM05D002977 ORTHO05D003225 2.4e-14 84.3 493 28.0
Gohir.D08G197000 Gossypium hirsutum HOM05D002977 ORTHO05D003225 3.1e-14 84.0 479 27.3
Solyc08g080280.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 3.1e-14 84.0 481 28.3
RcHm_v2.0_Chr7g0199421 Rosa chinensis HOM05D002977 ORTHO05D003225 5.4e-14 83.2 503 26.8
Gorai.008G243500 Gossypium raimondii HOM05D002977 ORTHO05D003225 9.1e-14 82.4 313 31.0
VMungo1215G3066 Vigna mungo HOM05D002977 ORTHO05D003225 1.2e-13 82.0 458 27.9
Atru.chr9.1537 Acer truncatum HOM05D002977 ORTHO05D003225 1.6e-13 81.6 481 25.4
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 1.6e-13 81.6 428 27.6
Sabra01G0084500 Salix brachista HOM05D002977 ORTHO05D003225 1.6e-13 81.6 474 28.7
SGA_v2.0_scaffold196G40889 Striga asiatica HOM05D002977 ORTHO05D003225 2.0e-13 81.3 462 25.1
Gohir.A12G224700 Gossypium hirsutum HOM05D002977 ORTHO05D003225 7.7e-13 79.3 308 30.2
COL.COLO4_05272 Corchorus olitorius HOM05D002977 ORTHO05D003225 1.3e-12 78.6 487 26.1
Gohir.D12G227500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 2.3e-12 77.8 312 29.8
Nitab4.5_0011100g0010 Nicotiana tabacum HOM05D002977 ORTHO05D003225 2.3e-12 77.8 492 27.2
ECA236G0338 Erigeron canadensis HOM05D002977 ORTHO05D003225 2.9e-12 77.4 440 27.7
CANSAT21G2154 Cannabis sativa HOM05D002977 ORTHO05D003225 8.6e-12 75.9 505 25.7
Lsat_1_v5_gn_6_13021 Lactuca sativa HOM05D002977 ORTHO05D003225 8.6e-12 75.9 481 25.6
Nitab4.5_0001714g0160 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.9e-11 74.7 495 26.1
AUR62017299 Chenopodium quinoa HOM05D002977 ORTHO05D003225 2.5e-11 74.3 389 26.0
FAN13G0210 Fragaria x ananassa HOM05D002524 ORTHO05D002718 2.5e-11 74.3 465 25.6
Oeu024421.1 Olea europaea HOM05D002977 ORTHO05D003225 3.3e-11 73.9 437 29.5
Ah.16g108930 Amaranthus hybridus HOM05D002977 ORTHO05D003225 4.2e-11 73.6 297 32.0
PGSC0003DMG400022757 Solanum tuberosum HOM05D002977 ORTHO05D003225 4.2e-11 73.6 484 26.2
Manes.02G027900 Manihot esculenta HOM05D002977 ORTHO05D003225 3.6e-10 70.5 481 24.3
Medtr4g102650 Medicago truncatula HOM05D002977 ORTHO05D003225 4.7e-10 70.1 439 27.1
Oeu024422.1 Olea europaea HOM05D002977 ORTHO05D003225 4.7e-10 70.1 437 29.1
CsaV3_5G003260 Cucumis sativus L. HOM05D002977 ORTHO05D003225 8.0e-10 69.3 475 26.3
FvH4_5g01430 Fragaria vesca HOM05D002977 ORTHO05D003225 1.0e-09 68.9 500 25.4
Ciclev10023310m.g Citrus clementina HOM05D002977 ORTHO05D003225 1.8e-09 68.2 218 29.8
FAN04G2551 Fragaria x ananassa HOM05D002524 ORTHO05D002718 2.3e-09 67.8 496 24.8
TPR.G37675 Trifolium pratense HOM05D002977 ORTHO05D003225 3.0e-09 67.4 458 25.3
MELO3C005628.2 Cucumis melo HOM05D002977 ORTHO05D003225 4.0e-09 67.0 478 25.5
Nitab4.5_0010430g0070 Nicotiana tabacum HOM05D002977 ORTHO05D003225 4.0e-09 67.0 209 33.0
PGR042G2476 Punica granatum HOM05D002977 ORTHO05D003225 8.9e-09 65.9 498 26.1
Psat4g067560 Pisum sativum HOM05D002977 ORTHO05D003225 1.5e-08 65.1 447 26.2
FAN08G2595 Fragaria x ananassa HOM05D002524 ORTHO05D002718 3.4e-08 63.9 386 27.2
Phvul.003G212900 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 3.4e-08 63.9 467 25.7
ClCG01G003130 Citrullus lanatus HOM05D002977 ORTHO05D003225 4.4e-08 63.5 461 24.9
ClCG05G001920 Citrullus lanatus HOM05D002977 ORTHO05D003225 1.7e-07 61.6 184 35.3
Migut.A00919 Erythranthe guttata HOM05D002977 ORTHO05D003225 1.7e-07 61.6 448 25.9
Nitab4.5_0003356g0060 Nicotiana tabacum HOM05D002977 ORTHO05D003225 2.2e-07 61.2 346 28.6
Dinv39013 Davidia involucrata HOM05D002977 ORTHO05D003225 2.9e-07 60.8 392 29.1
SGA_v2.0_scaffold153G37063 Striga asiatica HOM05D002977 ORTHO05D003225 2.9e-07 60.8 221 29.4
Sed0005409 Sechium edule HOM05D002977 ORTHO05D003225 3.7e-07 60.5 442 23.8
TWI60G0323 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 4.9e-07 60.1 487 23.4
DCAR_006904 Daucus carota HOM05D002977 ORTHO05D003225 6.3e-07 59.7 227 30.0
Thhalv10025169m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 8.3e-07 59.3 471 26.1
Lj2A196T48 Lonicera japonica HOM05D002977 ORTHO05D003225 8.3e-07 59.3 317 28.4
EL10Ac1g00967 Beta vulgaris HOM05D002977 ORTHO05D003225 1.8e-06 58.2 218 31.2
Sp7g21110 Schrenkiella parvula HOM05D002977 ORTHO05D003225 1.8e-06 58.2 483 25.3
Hund28360 Selenicereus undatus HOM05D002977 ORTHO05D003225 2.4e-06 57.8 271 31.0
Hund28364 Selenicereus undatus HOM05D002977 ORTHO05D003225 2.4e-06 57.8 271 31.0
MELO3C006152.2 Cucumis melo HOM05D002977 ORTHO05D003225 3.2e-06 57.4 244 32.0
BolC2t09827H Brassica oleracea HOM05D002977 ORTHO05D040183 4.1e-06 57.0 51 66.7
MD04G1068300 Malus domestica HOM05D002977 ORTHO05D003225 9.2e-06 55.8 239 30.5


User provided reference genes

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