Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 2.6e-136 488.8 265 100.0
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 4.9e-74 282.0 263 65.4
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 2.2e-66 256.5 266 65.0
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 2.1e-64 250.0 274 60.9
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 4.4e-59 232.3 259 57.9
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 1.3e-58 230.7 270 59.6
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 3.8e-58 229.2 286 54.5
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 5.1e-55 218.8 264 56.4
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 5.1e-55 218.8 264 56.4
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 7.3e-54 214.9 264 55.7
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 1.1e-52 211.1 256 53.9
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 4.9e-50 202.2 257 56.8
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 1.1e-46 191.0 267 50.6
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 1.5e-46 190.7 267 50.6
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 5.3e-44 182.2 265 46.8
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 3.4e-43 179.5 265 46.4
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 3.4e-43 179.5 251 48.2
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 9.9e-43 177.9 277 45.5
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 4.6e-40 169.1 286 44.4
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 2.5e-38 163.3 293 44.4
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 7.4e-38 161.8 325 37.5
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 4.8e-37 159.1 271 43.2
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 1.4e-36 157.5 254 42.5
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 1.8e-36 157.1 282 40.4
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 2.4e-36 156.8 306 36.6
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 3.1e-36 156.4 256 42.2
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 3.1e-36 156.4 257 40.9
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 3.1e-36 156.4 283 41.3
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 5.3e-36 155.6 261 42.1
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 6.9e-36 155.2 267 43.4
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 9.0e-36 154.8 287 42.5
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 3.4e-35 152.9 233 44.2
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 4.5e-35 152.5 276 42.0
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 5.8e-35 152.1 279 43.7
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 5.8e-35 152.1 291 42.3
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 7.6e-35 151.8 256 41.8
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 4.2e-33 146.0 294 41.2
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 4.2e-33 146.0 172 50.6
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 5.5e-33 145.6 260 41.5
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 5.5e-33 145.6 258 42.2
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 5.5e-33 145.6 273 39.6
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 9.3e-33 144.8 282 40.8
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 1.2e-32 144.4 290 39.0
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 1.2e-32 144.4 277 40.8
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 2.1e-32 143.7 261 41.4
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 5.1e-31 139.0 250 40.8
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 8.7e-31 138.3 250 38.0
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 1.1e-30 137.9 296 38.2
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 3.3e-30 136.3 279 37.3
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 4.3e-30 136.0 278 37.1
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 5.7e-30 135.6 283 38.9
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 5.7e-30 135.6 287 36.6
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 1.6e-29 134.0 271 37.6
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 2.1e-29 133.7 262 38.2
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 2.8e-29 133.3 282 37.6
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 4.8e-29 132.5 290 39.0
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 1.1e-28 131.3 242 41.7
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 1.4e-28 131.0 273 36.6
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 3.1e-28 129.8 291 35.7
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 5.3e-28 129.0 273 40.7
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 5.3e-28 129.0 150 50.7
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 1.2e-27 127.9 256 37.9
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 2.6e-27 126.7 256 39.8
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 4.5e-27 125.9 262 37.0
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 7.6e-27 125.2 205 41.0
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 7.6e-27 125.2 259 38.2
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 2.2e-26 123.6 287 35.2
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 2.9e-26 123.2 269 38.7
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 3.8e-26 122.9 301 32.2
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 1.4e-25 120.9 290 36.6
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 1.9e-25 120.6 290 33.8
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 5.5e-25 119.0 168 43.5
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 5.5e-25 119.0 248 40.7
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 7.1e-25 118.6 265 37.4
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 2.1e-24 117.1 266 38.3
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 2.7e-24 116.7 268 35.8
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 3.5e-24 116.3 306 29.4
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 7.9e-24 115.2 261 37.2
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.0e-23 114.8 276 34.8
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 1.0e-23 114.8 257 37.7
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 2.3e-23 113.6 283 33.9
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 3.0e-23 113.2 315 28.9
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 5.1e-23 112.5 276 37.7
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 8.7e-23 111.7 242 38.8
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.1e-22 111.3 245 35.5
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 2.5e-22 110.2 175 41.1
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 2.5e-22 110.2 187 40.6
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 3.3e-22 109.8 274 37.2
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 7.4e-22 108.6 75 66.7
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 9.7e-22 108.2 292 34.9
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 9.7e-22 108.2 269 37.2
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 1.6e-21 107.5 304 30.3
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 6.3e-21 105.5 292 32.5
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 3.1e-20 103.2 370 30.5
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 3.1e-20 103.2 274 36.5
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 4.1e-20 102.8 331 32.9
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 2.2e-18 97.1 273 34.8
AT4G00140 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 3.2e-17 93.2 160 45.6
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 1.2e-16 91.3 58 72.4
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 7.9e-16 88.6 195 39.0
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 1.5e-14 84.3 155 41.3
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 1.3e-13 81.3 122 44.3
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 1.4e-12 77.8 70 50.0
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 1.5e-11 74.3 295 27.5
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 3.4e-11 73.2 188 31.9
Mapoly0035s0135 Marchantia polymorpha HOM05D007090 ORTHO05D008993 2.2e-10 70.5 158 35.4
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 3.8e-10 69.7 58 51.7


User provided reference genes

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