Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 1.3e-142 509.6 241 100.0
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 1.5e-125 453.0 245 86.5
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 5.5e-117 424.5 243 82.3
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 1.6e-116 422.9 240 83.8
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 8.0e-116 420.6 238 82.8
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 2.3e-115 419.1 240 83.3
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 5.7e-114 414.5 240 82.9
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 4.1e-112 408.3 269 73.6
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 2.7e-111 405.6 263 76.4
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 3.3e-109 398.7 239 79.9
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 4.6e-103 378.3 241 74.3
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 1.8e-91 339.7 219 72.6
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 6.0e-87 324.7 233 63.5
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 3.0e-86 322.4 210 68.6
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 5.1e-86 321.6 231 64.1
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 6.6e-86 321.2 209 68.4
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 1.1e-85 320.5 229 65.9
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 2.5e-85 319.3 225 64.0
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 3.3e-85 318.9 212 68.9
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 2.1e-84 316.2 197 70.1
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 2.8e-84 315.8 204 67.2
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 3.6e-84 315.5 216 64.8
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 6.2e-84 314.7 210 67.6
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 8.1e-84 314.3 198 71.7
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 2.3e-83 312.8 198 68.7
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 3.1e-83 312.4 210 67.6
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 3.1e-83 312.4 197 69.5
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 5.2e-83 311.6 236 60.2
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 5.2e-83 311.6 209 68.9
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 6.8e-83 311.2 193 73.1
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 6.8e-83 311.2 198 68.2
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 1.2e-82 310.5 223 64.1
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 1.5e-82 310.1 215 64.7
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 1.5e-82 310.1 218 62.8
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 1.5e-82 310.1 215 66.0
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 3.4e-82 308.9 210 67.1
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 3.4e-82 308.9 240 63.3
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 3.4e-82 308.9 233 60.5
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 4.4e-82 308.5 218 62.8
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 7.6e-82 307.8 233 62.7
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 9.9e-82 307.4 239 63.6
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 9.9e-82 307.4 207 66.7
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 9.9e-82 307.4 201 68.2
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.3e-81 307.0 200 69.0
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.3e-81 307.0 200 69.0
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 1.7e-81 306.6 197 68.0
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 1.7e-81 306.6 197 69.0
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 2.2e-81 306.2 210 65.2
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 4.9e-81 305.1 197 69.0
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 6.4e-81 304.7 202 67.8
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 1.9e-80 303.1 197 67.5
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 1.9e-80 303.1 212 65.6
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 1.9e-80 303.1 196 67.9
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 2.4e-80 302.8 198 67.7
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 2.4e-80 302.8 198 67.2
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 2.4e-80 302.8 201 67.7
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 3.2e-80 302.4 200 66.0
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 3.2e-80 302.4 201 67.2
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 3.2e-80 302.4 231 60.2
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 4.1e-80 302.0 203 68.0
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 1.6e-79 300.1 196 67.9
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 6.0e-79 298.1 228 60.5
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 1.7e-78 296.6 200 66.5
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 3.9e-78 295.4 210 63.3
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 8.6e-78 294.3 213 62.9
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.1e-77 293.9 197 67.5
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 2.5e-77 292.7 198 66.2
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 3.3e-77 292.4 207 63.8
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 5.6e-77 291.6 198 63.1
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 1.2e-76 290.4 198 62.6
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.6e-76 290.0 187 71.7
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 6.2e-76 288.1 204 64.2
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 6.2e-76 288.1 218 63.3
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 1.8e-75 286.6 216 58.8
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 2.6e-74 282.7 243 55.1
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 3.4e-74 282.3 227 57.3
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 6.4e-73 278.1 198 63.1
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 4.2e-72 275.4 186 65.6
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 9.3e-72 274.2 202 66.3
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 1.7e-70 270.0 217 58.1
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 3.9e-70 268.9 161 72.0
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 1.5e-69 266.9 191 65.4
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 8.1e-68 261.2 192 60.4
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 4.0e-67 258.8 170 67.6
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 4.0e-67 258.8 174 64.9
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 4.0e-67 258.8 213 54.9
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 2.0e-66 256.5 193 58.5
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 1.9e-64 250.0 194 57.2
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 7.1e-64 248.1 207 60.4
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 2.1e-63 246.5 166 65.7
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 2.7e-63 246.1 194 57.7
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 6.9e-59 231.5 133 77.4
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 3.4e-58 229.2 164 62.8
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 4.5e-58 228.8 134 74.6
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 3.9e-54 215.7 148 64.9
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 3.1e-51 206.1 166 56.0
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 1.9e-48 196.8 203 47.3
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.4e-43 180.6 231 45.5
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 9.0e-43 177.9 112 67.9
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 3.4e-42 176.0 93 82.8
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 5.9e-42 175.3 126 61.9
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 7.6e-42 174.9 221 45.7
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 9.3e-40 167.9 199 40.2
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 3.6e-39 166.0 104 66.3
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 5.3e-35 152.1 144 49.3
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 5.1e-30 135.6 80 75.0
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 4.8e-28 129.0 88 65.9
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 9.1e-19 98.2 60 76.7
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 1.3e-17 94.4 57 71.9
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 2.2e-17 93.6 65 64.6
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 6.5e-17 92.0 67 65.7
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 6.1e-15 85.5 54 68.5
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 1.4e-14 84.3 67 53.7
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 3.1e-11 73.2 67 50.7
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 7.0e-11 72.0 54 55.6
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 2.2e-09 67.0 96 38.5
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 2.2e-09 67.0 91 40.7
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 2.2e-09 67.0 91 40.7
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 2.2e-09 67.0 91 40.7
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 6.5e-09 65.5 90 40.0
AagrBONN_evm.TU.Sc2ySwM_368.158 Anthoceros agrestis HOM05D022947 ORTHO05D023489 3.2e-08 63.2 111 33.3
AagrBONN_evm.TU.Sc2ySwM_368.137 Anthoceros agrestis HOM05D022947 ORTHO05D023489 9.4e-08 61.6 117 31.6
AagrBONN_evm.TU.Sc2ySwM_368.140 Anthoceros agrestis HOM05D022947 ORTHO05D023489 9.4e-08 61.6 117 31.6
AagrBONN_evm.TU.Sc2ySwM_368.930 Anthoceros agrestis HOM05D022947 ORTHO05D023489 9.4e-08 61.6 120 30.0
Cpa.g.sc32.161 Carica papaya HOM05D006824 ORTHO05D008779 6.8e-06 55.5 33 72.7


User provided reference genes

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