Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g35140 Schrenkiella parvula HOM05D006735 ORTHO05D009558 2.5e-50 201.8 102 100.0
AL2G40820 Arabidopsis lyrata HOM05D006735 ORTHO05D009558 8.0e-33 143.7 96 77.1
AT1G80625 Arabidopsis thaliana HOM05D006735 ORTHO05D009558 1.7e-30 136.0 96 71.9
Carub.0003s1967 Capsella rubella HOM05D006735 ORTHO05D009558 2.6e-15 85.5 82 54.9
A01p26730 Brassica napus HOM05D006735 ORTHO05D009558 4.6e-12 74.7 77 42.9
C09p22370 Brassica napus HOM05D006735 ORTHO05D009558 1.0e-11 73.6 98 40.8
AL3G33240 Arabidopsis lyrata HOM05D006735 ORTHO05D009558 1.7e-11 72.8 82 46.3
AT3G19790 Arabidopsis thaliana HOM05D006735 ORTHO05D009558 1.7e-11 72.8 82 50.0
Thhalv10022056m.g Eutrema salsugineum HOM05D006735 ORTHO05D009558 1.7e-11 72.8 63 55.6
BcaC09g48693 Brassica carinata HOM05D006735 ORTHO05D009558 2.3e-11 72.4 70 45.7
BcaC03g15864 Brassica carinata HOM05D006735 ORTHO05D009558 3.0e-11 72.0 98 39.8
BcaC07g38146 Brassica carinata HOM05D006735 ORTHO05D009558 3.0e-11 72.0 98 39.8
A08p25190 Brassica napus HOM05D006735 ORTHO05D009558 3.0e-11 72.0 98 39.8
C01p49010 Brassica napus HOM05D006735 ORTHO05D000586 3.0e-11 72.0 98 39.8
BcaC08g45821 Brassica carinata HOM05D006735 ORTHO05D009558 3.9e-11 71.6 98 39.8
C08p49000 Brassica napus HOM05D006735 ORTHO05D009558 3.9e-11 71.6 109 38.5
BcaC04g20691 Brassica carinata HOM05D006735 ORTHO05D009558 5.0e-11 71.2 97 39.2
BcaC09g51566 Brassica carinata HOM05D006735 ORTHO05D009558 5.0e-11 71.2 97 39.2
C02p38090 Brassica napus HOM05D006735 ORTHO05D009558 5.0e-11 71.2 104 40.4
C03p71260 Brassica napus HOM05D006735 ORTHO05D009558 5.0e-11 71.2 104 40.4
C06p04290 Brassica napus HOM05D006735 ORTHO05D009558 5.0e-11 71.2 104 40.4
C04p61000 Brassica napus HOM05D006735 ORTHO05D009558 6.6e-11 70.9 97 39.2
BcaC09g51945 Brassica carinata HOM05D006735 ORTHO05D009558 8.6e-11 70.5 98 38.8
C09p40570 Brassica napus HOM05D006735 ORTHO05D009558 8.6e-11 70.5 97 39.2
A09p42550 Brassica napus HOM05D006735 ORTHO05D009558 1.1e-10 70.1 97 38.1
A10p02300 Brassica napus HOM05D006735 ORTHO05D009558 1.1e-10 70.1 109 36.7
C03p85420 Brassica napus HOM05D006735 ORTHO05D009558 1.1e-10 70.1 92 41.3
C01p27580 Brassica napus HOM05D006735 ORTHO05D009558 1.5e-10 69.7 104 39.4
C04p69030 Brassica napus HOM05D006735 ORTHO05D009558 1.9e-10 69.3 98 38.8
C06p06100 Brassica napus HOM05D006735 ORTHO05D009558 1.6e-09 66.2 109 35.8
C09p53130 Brassica napus HOM05D006735 ORTHO05D009558 2.1e-09 65.9 102 32.4
BcaB01g02897 Brassica carinata HOM05D006735 ORTHO05D009558 2.8e-09 65.5 71 43.7
A07p02010 Brassica napus HOM05D006735 ORTHO05D009558 2.8e-09 65.5 102 33.3
BolC9t58189H Brassica oleracea HOM05D006735 ORTHO05D009558 2.8e-09 65.5 97 34.0
BcaC01g00870 Brassica carinata HOM05D006735 ORTHO05D009558 3.6e-09 65.1 86 41.9
C03p17760 Brassica napus HOM05D006735 ORTHO05D009558 3.6e-09 65.1 102 33.3
BcaC03g18043 Brassica carinata HOM05D006735 ORTHO05D009558 1.1e-08 63.5 71 42.3
C03p60980 Brassica napus HOM05D006735 ORTHO05D009558 1.1e-08 63.5 102 33.3
BcaB07g33626 Brassica carinata HOM05D011499 ORTHO05D011963 1.8e-08 62.8 59 44.1
CARHR117250 Cardamine hirsuta HOM05D000477 ORTHO05D000338 1.8e-08 62.8 94 36.2
BcaC01g02272 Brassica carinata HOM05D006735 ORTHO05D009558 5.2e-08 61.2 64 43.8
BcaC01g03559 Brassica carinata HOM05D006735 ORTHO05D009558 8.9e-08 60.5 71 39.4
BcaC08g43985 Brassica carinata HOM05D006735 ORTHO05D009558 8.9e-08 60.5 71 39.4
C03p67160 Brassica napus HOM05D006735 ORTHO05D009558 8.9e-08 60.5 71 39.4
BolC3t17400H Brassica oleracea HOM05D006735 ORTHO05D009558 8.9e-08 60.5 71 39.4
Thhalv10002194m.g Eutrema salsugineum HOM05D006735 ORTHO05D011963 2.0e-07 59.3 90 37.8
BcaNung00856 Brassica carinata HOM05D011499 ORTHO05D011963 2.9e-06 55.5 47 53.2


User provided reference genes

Program Settings