Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 1.1e-101 373.2 176 100.0
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 5.3e-93 344.4 165 97.0
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 1.5e-92 342.8 165 97.0
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 2.6e-92 342.0 165 96.4
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 2.6e-92 342.0 165 96.4
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 5.9e-92 340.9 165 95.8
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 2.2e-91 339.0 165 95.8
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 2.2e-91 339.0 165 95.8
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 1.0e-88 330.1 165 95.2
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 1.4e-88 329.7 165 93.3
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 3.9e-88 328.2 165 92.7
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 4.4e-87 324.7 165 93.9
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 4.8e-86 321.2 164 89.0
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 1.5e-82 309.7 165 86.7
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 1.5e-79 299.7 165 81.8
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 5.7e-79 297.7 165 83.0
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 7.5e-79 297.4 163 81.0
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 1.7e-78 296.2 165 87.9
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 1.7e-78 296.2 165 81.2
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 4.8e-78 294.7 166 82.5
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 6.3e-78 294.3 165 78.8
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 8.2e-78 293.9 172 76.2
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 8.2e-78 293.9 165 80.0
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 1.4e-77 293.1 161 82.6
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 1.4e-77 293.1 162 79.0
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 2.4e-77 292.4 165 79.4
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 7.0e-77 290.8 165 80.6
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 7.0e-77 290.8 165 81.2
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 9.1e-77 290.4 165 78.8
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 1.6e-76 289.7 166 78.9
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 4.5e-76 288.1 165 79.4
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 4.5e-76 288.1 165 79.4
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 4.5e-76 288.1 165 80.0
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 4.5e-76 288.1 165 80.0
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 7.7e-76 287.3 166 78.9
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 7.7e-76 287.3 161 82.0
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 1.3e-75 286.6 161 78.9
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 1.3e-75 286.6 165 78.2
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 1.7e-75 286.2 165 80.0
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 1.7e-75 286.2 165 80.0
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 2.9e-75 285.4 165 80.0
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 2.9e-75 285.4 165 80.0
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 3.8e-75 285.0 165 79.4
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 1.1e-74 283.5 165 75.8
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.9e-74 282.7 165 77.6
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 3.2e-74 282.0 165 78.2
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 4.2e-74 281.6 163 77.9
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 5.5e-74 281.2 165 75.2
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 5.5e-74 281.2 165 75.8
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 5.5e-74 281.2 165 78.2
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 7.2e-74 280.8 161 78.9
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 9.4e-74 280.4 165 75.2
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 1.2e-73 280.0 165 78.2
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 1.2e-73 280.0 165 77.6
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 1.6e-73 279.6 165 74.5
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 2.1e-73 279.3 166 75.9
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 3.6e-73 278.5 165 75.2
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 3.6e-73 278.5 165 78.2
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 8.0e-73 277.3 165 78.2
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 1.4e-72 276.6 161 78.3
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 1.8e-72 276.2 165 75.8
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 2.3e-72 275.8 165 75.2
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 3.0e-72 275.4 165 75.8
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 4.0e-72 275.0 165 77.0
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 4.0e-72 275.0 168 75.6
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 5.2e-72 274.6 173 71.7
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 1.2e-71 273.5 165 76.4
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 1.5e-71 273.1 164 78.7
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 1.5e-71 273.1 161 78.3
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 4.4e-71 271.6 165 74.5
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 3.7e-70 268.5 161 75.2
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 4.8e-70 268.1 166 74.1
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 6.3e-70 267.7 165 75.2
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 1.1e-69 266.9 164 72.6
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 1.6e-68 263.1 161 74.5
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 2.0e-68 262.7 165 74.5
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 3.5e-68 261.9 157 77.7
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 3.8e-67 258.5 164 75.0
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 5.5e-66 254.6 168 70.8
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 7.2e-66 254.2 144 78.5
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 1.6e-65 253.1 161 70.2
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 2.0e-63 246.1 262 50.8
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 9.2e-61 237.3 202 57.9
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 4.4e-55 218.4 126 79.4
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 6.4e-54 214.5 117 82.9
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 1.1e-53 213.8 140 70.0
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 4.1e-53 211.8 157 61.8
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 2.7e-52 209.1 159 62.3
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 7.8e-52 207.6 167 60.5
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 1.5e-50 203.4 109 86.2
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 7.3e-50 201.1 164 57.9
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 7.3e-50 201.1 159 57.9
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 9.2e-37 157.5 82 89.0
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 3.9e-35 152.1 80 86.2
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 3.3e-34 149.1 91 71.4
Cpa.g.sc10.78 Carica papaya HOM05D007259 ORTHO05D009158 2.1e-33 146.4 82 75.6
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 2.8e-33 146.0 83 79.5
FAN02G2583 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.1e-32 144.1 82 76.8
MD17G1223600 Malus domestica HOM05D007259 ORTHO05D009158 1.4e-32 143.7 83 75.9
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 1.5e-31 140.2 87 74.7
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 2.0e-31 139.8 91 65.9
MELO3C026739.2 Cucumis melo HOM05D007259 ORTHO05D009158 6.4e-30 134.8 92 65.2
Lj5C80T7 Lonicera japonica HOM05D007259 ORTHO05D009158 1.6e-28 130.2 82 69.5
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 6.6e-27 124.8 94 64.9
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 1.1e-16 90.9 68 64.7
COL.COLO4_26703 Corchorus olitorius HOM05D007259 ORTHO05D009158 6.0e-12 75.1 43 79.1


User provided reference genes

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