Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 1.9e-81 305.8 157 100.0
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 4.9e-74 281.2 155 92.3
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 1.9e-73 279.3 155 90.3
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 2.4e-73 278.9 155 89.7
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 2.1e-72 275.8 157 87.3
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 2.7e-72 275.4 156 89.1
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 2.7e-72 275.4 156 89.1
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 3.5e-72 275.0 155 89.0
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 1.3e-71 273.1 156 88.5
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 3.0e-71 271.9 156 88.5
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 2.5e-70 268.9 155 87.7
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 2.8e-69 265.4 155 86.5
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 5.3e-68 261.2 153 85.6
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 4.1e-60 235.0 154 76.6
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 2.5e-57 225.7 153 73.9
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 7.9e-56 220.7 155 76.8
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 2.3e-55 219.2 153 72.5
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 5.7e-54 214.5 153 71.2
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 7.4e-54 214.2 155 71.0
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 9.7e-54 213.8 150 73.3
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 8.2e-53 210.7 153 70.6
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 6.9e-52 207.6 153 69.9
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 1.2e-51 206.8 155 70.3
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 2.6e-51 205.7 155 70.3
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 2.9e-50 202.2 153 66.7
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 1.4e-49 199.9 150 68.7
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.4e-49 199.9 140 73.6
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 1.9e-49 199.5 155 69.7
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 1.9e-49 199.5 157 66.9
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 2.5e-49 199.1 155 69.7
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 2.5e-49 199.1 157 66.9
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 4.2e-49 198.4 157 66.9
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 5.5e-49 198.0 155 67.1
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 1.6e-48 196.4 147 67.3
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 2.7e-48 195.7 129 72.9
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 2.7e-48 195.7 155 67.1
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 6.1e-48 194.5 124 79.0
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 6.1e-48 194.5 127 78.0
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 7.9e-48 194.1 154 66.9
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 7.9e-48 194.1 146 69.9
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 7.9e-48 194.1 155 64.5
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 7.9e-48 194.1 126 74.6
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 1.0e-47 193.7 123 79.7
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 1.4e-47 193.4 153 64.1
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 1.4e-47 193.4 140 72.9
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 1.4e-47 193.4 152 67.1
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 1.8e-47 193.0 134 73.9
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 1.8e-47 193.0 157 66.2
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 2.3e-47 192.6 150 64.7
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 3.9e-47 191.8 157 66.2
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 5.1e-47 191.4 156 67.3
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 8.8e-47 190.7 151 67.5
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 1.1e-46 190.3 126 75.4
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 1.5e-46 189.9 138 68.8
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 2.0e-46 189.5 128 74.2
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 2.6e-46 189.1 157 66.9
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 2.6e-46 189.1 124 73.4
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 3.3e-46 188.7 124 73.4
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 4.4e-46 188.3 103 89.3
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 5.7e-46 188.0 126 76.2
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 7.4e-46 187.6 154 64.3
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 9.7e-46 187.2 157 63.1
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 1.3e-45 186.8 124 76.6
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 1.3e-45 186.8 127 75.6
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 2.2e-45 186.0 124 72.6
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 2.8e-45 185.7 154 63.0
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 3.7e-45 185.3 123 74.0
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 3.7e-45 185.3 155 61.3
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 6.3e-45 184.5 149 67.8
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 6.3e-45 184.5 147 64.6
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 8.2e-45 184.1 123 74.0
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 8.2e-45 184.1 153 61.4
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 1.4e-44 183.3 153 62.7
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 1.8e-44 183.0 156 64.1
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 1.8e-44 183.0 153 65.4
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 1.8e-44 183.0 123 74.0
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 2.4e-44 182.6 155 62.6
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 2.4e-44 182.6 155 61.9
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 2.4e-44 182.6 159 64.8
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 5.3e-44 181.4 151 60.9
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 9.1e-44 180.6 153 66.0
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 9.1e-44 180.6 156 57.7
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 1.2e-43 180.3 145 62.8
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 2.0e-43 179.5 124 68.5
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 2.6e-43 179.1 129 64.3
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 3.4e-43 178.7 153 64.7
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 7.7e-43 177.6 126 69.0
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 1.3e-42 176.8 150 61.3
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 1.7e-42 176.4 152 62.5
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 6.5e-42 174.5 154 58.4
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 1.4e-41 173.3 147 61.2
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 1.9e-41 172.9 152 59.9
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 4.2e-41 171.8 147 61.9
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 1.2e-40 170.2 155 61.9
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 6.1e-40 167.9 123 65.9
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 7.9e-40 167.5 145 60.0
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 1.0e-39 167.2 126 69.8
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 3.0e-39 165.6 148 59.5
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 5.2e-39 164.9 126 68.3
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 5.2e-39 164.9 145 58.6
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 1.5e-38 163.3 130 60.8
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 2.0e-38 162.9 120 70.0
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 2.0e-38 162.9 155 56.1
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 2.6e-38 162.5 123 65.9
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 2.2e-37 159.5 124 66.9
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.4e-36 156.8 154 56.5
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 4.1e-36 155.2 132 63.6
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 5.3e-36 154.8 155 53.5
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 1.2e-35 153.7 133 61.7
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 9.4e-33 144.1 151 55.0
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 9.1e-28 127.5 126 50.8
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 2.2e-26 122.9 135 50.4
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 1.1e-25 120.6 121 53.7
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 1.9e-25 119.8 123 51.2
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 6.1e-24 114.8 131 49.6
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 1.0e-23 114.0 117 50.4
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 3.0e-23 112.5 111 51.4
BcaC08g47102 Brassica carinata HOM05D006402 ORTHO05D008099 4.8e-21 105.1 62 87.1
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 2.0e-19 99.8 93 55.9
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 3.5e-19 99.0 94 57.4
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 8.6e-18 94.4 81 53.1
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 2.1e-16 89.7 100 56.0
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 2.1e-16 89.7 114 43.0
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 5.7e-14 81.6 85 57.6
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 3.1e-12 75.9 117 41.9


User provided reference genes

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