Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 2.8e-69 265.4 158 100.0
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 2.3e-63 245.7 158 93.0
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 2.6e-62 242.3 159 92.5
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 2.2e-61 239.2 158 92.4
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 2.4e-60 235.7 158 90.5
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 2.0e-59 232.6 159 90.6
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 5.9e-59 231.1 152 92.1
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 1.7e-58 229.6 152 91.4
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 8.5e-58 227.3 152 91.4
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 1.5e-57 226.5 159 88.1
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 1.5e-57 226.5 153 91.5
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 2.1e-56 222.6 159 88.1
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 2.1e-56 222.6 163 84.7
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 2.3e-55 219.2 158 86.1
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 1.4e-52 209.9 151 86.1
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 4.1e-52 208.4 151 85.4
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 1.6e-51 206.5 151 84.8
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 1.0e-50 203.8 151 84.1
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 4.4e-46 188.3 159 78.0
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 7.5e-46 187.6 158 77.2
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 1.7e-45 186.4 158 75.9
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 2.2e-45 186.0 157 75.2
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 2.8e-45 185.7 161 74.5
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 8.3e-45 184.1 159 70.4
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 1.1e-44 183.7 157 75.2
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 1.4e-44 183.3 156 75.0
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 1.8e-44 183.0 159 74.8
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 2.4e-44 182.6 160 71.9
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 2.4e-44 182.6 157 75.2
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 3.1e-44 182.2 158 75.3
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 3.1e-44 182.2 156 74.4
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 9.1e-44 180.6 153 73.2
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 2.0e-43 179.5 159 74.2
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 3.5e-43 178.7 161 72.7
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 3.5e-43 178.7 155 72.3
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 4.5e-43 178.3 148 77.7
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 5.9e-43 177.9 149 79.2
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 5.9e-43 177.9 163 69.9
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 5.9e-43 177.9 157 72.6
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 5.9e-43 177.9 155 72.3
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 5.9e-43 177.9 162 73.5
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 5.9e-43 177.9 155 74.2
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 5.9e-43 177.9 155 73.5
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 7.7e-43 177.6 155 72.3
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 1.3e-42 176.8 154 74.0
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 1.7e-42 176.4 157 71.3
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 2.9e-42 175.6 162 72.2
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 3.8e-42 175.3 162 69.1
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 3.8e-42 175.3 159 73.0
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 3.8e-42 175.3 155 71.6
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 3.8e-42 175.3 155 74.2
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 3.8e-42 175.3 156 75.0
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 5.0e-42 174.9 155 72.9
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 5.0e-42 174.9 159 72.3
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 1.1e-41 173.7 155 70.3
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 1.1e-41 173.7 157 71.3
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 1.1e-41 173.7 152 76.3
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 1.5e-41 173.3 159 70.4
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 1.9e-41 172.9 159 67.9
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 9.5e-41 170.6 153 73.2
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 1.2e-40 170.2 158 67.7
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.2e-40 170.2 163 69.9
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 2.7e-40 169.1 166 69.9
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 4.7e-40 168.3 161 71.4
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 2.3e-39 166.0 148 74.3
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 2.3e-39 166.0 160 69.4
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 2.3e-39 166.0 150 72.7
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 2.3e-39 166.0 155 71.0
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 4.0e-39 165.2 165 68.5
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 4.0e-39 165.2 158 68.4
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 5.2e-39 164.9 149 71.1
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 8.8e-39 164.1 155 70.3
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 8.8e-39 164.1 148 75.0
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 2.6e-38 162.5 148 64.2
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 2.6e-38 162.5 151 72.2
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 5.7e-38 161.4 159 70.4
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.7e-37 159.8 194 59.8
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 2.2e-37 159.5 159 66.7
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 2.8e-37 159.1 156 69.9
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 4.9e-37 158.3 153 71.9
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 4.9e-37 158.3 148 70.3
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 1.4e-36 156.8 151 67.5
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 3.1e-36 155.6 156 69.2
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 3.1e-36 155.6 193 58.0
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 4.1e-36 155.2 159 67.9
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 2.7e-35 152.5 141 73.0
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 2.7e-35 152.5 192 47.4
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 5.0e-34 148.3 121 77.7
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 1.6e-32 143.3 111 75.7
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 1.6e-32 143.3 118 74.6
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.6e-32 143.3 129 67.4
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.4e-31 140.2 111 74.8
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 1.1e-28 130.6 143 62.9
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 1.8e-28 129.8 168 50.0
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 1.9e-25 119.8 149 62.4
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 4.3e-25 118.6 100 64.0
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 7.3e-25 117.9 123 61.8
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 1.6e-24 116.7 183 43.7
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 2.8e-24 115.9 102 60.8
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 8.0e-24 114.4 154 48.1
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 3.1e-23 112.5 123 56.1
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.6e-19 100.1 97 59.8
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 2.1e-16 89.7 90 52.2
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 3.1e-15 85.9 142 43.7
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 4.1e-12 75.5 58 67.2
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 1.0e-10 70.9 97 48.5
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 1.5e-09 67.0 60 53.3
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 1.4e-07 60.5 96 37.5
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 7.6e-06 54.7 67 50.7


User provided reference genes

Program Settings