Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 3.3e-59 231.5 115 100.0
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 1.9e-46 189.1 159 66.0
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 1.2e-45 186.4 159 64.2
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 3.5e-45 184.9 159 65.4
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 3.5e-45 184.9 161 65.8
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 1.3e-44 183.0 160 64.4
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 3.9e-44 181.4 157 65.0
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 5.3e-41 171.0 159 61.0
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 1.2e-40 169.9 155 61.3
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 7.6e-40 167.2 154 62.3
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 4.9e-39 164.5 157 57.3
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 1.4e-33 146.4 164 52.4
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 1.8e-33 146.0 113 65.5
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 4.0e-33 144.8 79 82.3
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 4.0e-33 144.8 79 82.3
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 5.3e-33 144.4 108 65.7
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 9.0e-33 143.7 79 82.3
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 9.0e-33 143.7 162 51.2
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 1.2e-32 143.3 79 81.0
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 1.5e-32 142.9 79 82.3
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 1.5e-32 142.9 79 81.0
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 2.0e-32 142.5 106 66.0
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 2.6e-32 142.1 79 79.7
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 2.6e-32 142.1 79 78.5
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 2.6e-32 142.1 79 81.0
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 2.6e-32 142.1 79 79.7
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 2.6e-32 142.1 109 63.3
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 2.6e-32 142.1 99 66.7
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 3.4e-32 141.7 79 79.7
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 4.5e-32 141.4 79 79.7
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 4.5e-32 141.4 79 81.0
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 4.5e-32 141.4 79 79.7
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 5.8e-32 141.0 79 81.0
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 5.8e-32 141.0 79 79.7
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 7.6e-32 140.6 111 63.1
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 7.6e-32 140.6 99 67.7
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 7.6e-32 140.6 162 50.6
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 7.6e-32 140.6 79 78.5
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 7.6e-32 140.6 79 78.5
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 1.0e-31 140.2 79 78.5
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 1.0e-31 140.2 79 79.7
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.0e-31 140.2 162 50.6
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 1.0e-31 140.2 79 78.5
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 1.3e-31 139.8 79 78.5
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 1.3e-31 139.8 111 62.2
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.3e-31 139.8 162 50.6
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.3e-31 139.8 162 50.6
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 1.7e-31 139.4 79 77.2
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 1.7e-31 139.4 79 77.2
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 1.7e-31 139.4 79 77.2
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 1.7e-31 139.4 111 63.1
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 1.7e-31 139.4 102 66.7
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 2.2e-31 139.0 102 64.7
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 2.2e-31 139.0 79 78.5
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 2.2e-31 139.0 79 78.5
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 2.2e-31 139.0 79 78.5
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 2.2e-31 139.0 79 78.5
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 2.9e-31 138.7 79 78.5
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 2.9e-31 138.7 71 87.3
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 3.8e-31 138.3 79 77.2
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 4.9e-31 137.9 114 60.5
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 4.9e-31 137.9 106 66.0
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 6.5e-31 137.5 159 52.2
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 6.5e-31 137.5 100 67.0
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 1.1e-30 136.7 79 78.5
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 1.4e-30 136.3 79 77.2
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 1.4e-30 136.3 79 78.5
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 1.9e-30 136.0 79 77.2
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 1.9e-30 136.0 109 64.2
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 5.5e-30 134.4 112 59.8
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 7.1e-30 134.0 97 63.9
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 9.3e-30 133.7 99 65.7
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 9.3e-30 133.7 99 65.7
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 1.2e-29 133.3 79 75.9
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 2.1e-29 132.5 119 59.7
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 2.7e-29 132.1 101 61.4
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 3.5e-29 131.7 104 64.4
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 3.5e-29 131.7 79 75.9
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 2.3e-28 129.0 70 80.0
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 3.9e-28 128.3 119 57.1
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 8.7e-28 127.1 70 78.6
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 1.1e-27 126.7 117 55.6
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 1.1e-27 126.7 101 61.4
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 1.5e-27 126.3 69 78.3
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 1.5e-27 126.3 74 74.3
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 2.5e-27 125.6 69 76.8
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 5.7e-27 124.4 93 62.4
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 2.1e-26 122.5 93 66.7
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 2.8e-26 122.1 77 68.8
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 2.8e-26 122.1 69 76.8
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 3.7e-26 121.7 74 71.6
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 1.4e-25 119.8 69 78.3
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 1.8e-25 119.4 69 75.4
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 2.4e-25 119.0 132 55.3
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 2.4e-25 119.0 70 74.3
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 7.6e-24 114.0 69 75.4
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 1.3e-23 113.2 113 49.6
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 1.1e-22 110.2 182 42.3
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 2.5e-22 109.0 77 62.3
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 1.6e-21 106.3 79 63.3
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 6.1e-21 104.4 111 52.3
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 4.8e-10 68.2 42 71.4
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 2.9e-07 58.9 35 71.4


User provided reference genes

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