Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g29500 Schrenkiella parvula HOM05D002388 ORTHO05D008833 3.0e-35 151.4 81 100.0
CARHR067600 Cardamine hirsuta HOM05D002388 ORTHO05D008833 1.2e-34 149.4 81 97.5
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 2.0e-34 148.7 81 96.3
AT1G74340 Arabidopsis thaliana HOM05D002388 ORTHO05D008833 2.0e-34 148.7 81 96.3
Aa31LG4G4590 Aethionema arabicum HOM05D002388 ORTHO05D008833 2.6e-34 148.3 81 97.5
A02p19260 Brassica napus HOM05D002388 ORTHO05D008833 2.6e-34 148.3 81 97.5
BolC2t09212H Brassica oleracea HOM05D002388 ORTHO05D008833 2.6e-34 148.3 81 97.5
BraA07t31559Z Brassica rapa HOM05D002388 ORTHO05D008833 2.6e-34 148.3 81 97.5
Thhalv10019650m.g Eutrema salsugineum HOM05D002388 ORTHO05D008833 2.6e-34 148.3 81 97.5
Carub.0002s2112 Capsella rubella HOM05D002388 ORTHO05D008833 3.4e-34 147.9 81 96.3
BraA02t06971Z Brassica rapa HOM05D002388 ORTHO05D008833 5.7e-34 147.1 81 96.3
BcaC08g46864 Brassica carinata HOM05D002388 ORTHO05D008833 1.7e-33 145.6 81 96.3
BolC6t39879H Brassica oleracea HOM05D002388 ORTHO05D008833 1.7e-33 145.6 81 96.3
SalBow6G3465 Salvia bowleyana HOM05D002388 ORTHO05D008833 1.6e-31 139.0 81 88.9
THA.LOC104804589 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 4.5e-31 137.5 81 87.7
Nitab4.5_0000556g0150 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.3e-30 136.0 81 86.4
PSO384G4479 Papaver somniferum HOM05D002388 ORTHO05D008833 1.7e-30 135.6 81 86.4
Actinidia14785 Actinidia chinensis HOM05D002388 ORTHO05D008833 3.8e-30 134.4 81 86.4
Peaxi162Scf00045g00216 Petunia axillaris HOM05D002388 ORTHO05D008833 3.8e-30 134.4 81 85.2
Cpa.g.sc13.304 Carica papaya HOM05D002388 ORTHO05D008833 5.0e-30 134.0 81 85.2
Nitab4.5_0002778g0070 Nicotiana tabacum HOM05D002388 ORTHO05D008833 5.0e-30 134.0 80 86.2
PSO339G0280 Papaver somniferum HOM05D002388 ORTHO05D008833 5.0e-30 134.0 81 85.2
CiPaw.11G097500 Carya illinoinensis HOM05D002388 ORTHO05D008833 6.6e-30 133.7 81 85.2
COL.COLO4_16958 Corchorus olitorius HOM05D002388 ORTHO05D008833 6.6e-30 133.7 81 87.7
TPR.G3364 Trifolium pratense HOM05D002388 ORTHO05D008833 6.6e-30 133.7 81 86.4
Eucgr.D02219 Eucalyptus grandis HOM05D002388 ORTHO05D008833 8.6e-30 133.3 81 84.0
Solyc08g005210.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 8.6e-30 133.3 81 85.2
Sopen08g001240 Solanum pennellii HOM05D002388 ORTHO05D008833 8.6e-30 133.3 81 85.2
Glyma.10G041600 Glycine max HOM05D002388 ORTHO05D008833 1.1e-29 132.9 81 85.2
Hma1.2p1_0870F.1_g230830 Hydrangea macrophylla HOM05D002388 ORTHO05D008833 1.1e-29 132.9 80 83.8
arahy.Tifrunner.gnm1.ann1.Y11EX9 Arachis hypogaea HOM05D002388 ORTHO05D008833 1.9e-29 132.1 81 82.7
Haze_08171 Corylus avellana HOM05D002388 ORTHO05D008833 1.9e-29 132.1 81 85.2
Medtr8g066600 Medicago truncatula HOM05D002388 ORTHO05D008833 1.9e-29 132.1 81 84.0
PGR031G2620 Punica granatum HOM05D002388 ORTHO05D008833 1.9e-29 132.1 79 84.8
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 1.9e-29 132.1 81 84.0
TAR375G0363 Trochodendron aralioides HOM05D002388 ORTHO05D008833 1.9e-29 132.1 81 82.7
CAN.G474.16 Capsicum annuum HOM05D002388 ORTHO05D008833 2.5e-29 131.7 81 82.7
DCAR_004281 Daucus carota HOM05D002388 ORTHO05D008833 2.5e-29 131.7 81 84.0
CAN.G137.4 Capsicum annuum HOM05D002388 ORTHO05D008833 4.3e-29 131.0 81 82.7
Peaxi162Scf00185g00821 Petunia axillaris HOM05D002388 ORTHO05D008833 4.3e-29 131.0 81 82.7
QL12p001301 Quercus lobata HOM05D002388 ORTHO05D008833 4.3e-29 131.0 80 85.0
Sed0013912 Sechium edule HOM05D002388 ORTHO05D008833 4.3e-29 131.0 81 81.5
vmacro14193 Vaccinium macrocarpon HOM05D002388 ORTHO05D008833 4.3e-29 131.0 81 82.7
Glyma.13G128600 Glycine max HOM05D002388 ORTHO05D008833 5.6e-29 130.6 81 84.0
SGA_v2.0_scaffold20G09240 Striga asiatica HOM05D002388 ORTHO05D008833 7.3e-29 130.2 80 81.2
AUR62018655 Chenopodium quinoa HOM05D002388 ORTHO05D008833 1.2e-28 129.4 81 84.0
Nn3g19407 Nelumbo nucifera HOM05D002388 ORTHO05D008833 1.2e-28 129.4 81 85.2
Nitab4.5_0001632g0030 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.2e-28 129.4 81 81.5
Potri.001G138100 Populus trichocarpa HOM05D002388 ORTHO05D008833 1.2e-28 129.4 81 81.5
CSS0026703 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.6e-28 129.0 81 81.5
CSS0033524 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.6e-28 129.0 81 81.5
CiPaw.12G067300 Carya illinoinensis HOM05D002388 ORTHO05D008833 1.6e-28 129.0 81 81.5
CsaV3_3G001440 Cucumis sativus L. HOM05D002388 ORTHO05D008833 1.6e-28 129.0 81 80.2
Dinv28991 Davidia involucrata HOM05D002388 ORTHO05D008833 1.6e-28 129.0 81 85.2
Migut.A01083 Erythranthe guttata HOM05D002388 ORTHO05D008833 1.6e-28 129.0 81 79.0
Prupe.5G029600 Prunus persica HOM05D002388 ORTHO05D008833 1.6e-28 129.0 81 81.5
MELO3C013830.2 Cucumis melo HOM05D002388 ORTHO05D008833 2.1e-28 128.6 81 79.0
FAN04G1000 Fragaria x ananassa HOM05D002388 ORTHO05D008833 2.1e-28 128.6 81 81.5
FAN18G1485 Fragaria x ananassa HOM05D002388 ORTHO05D008833 2.1e-28 128.6 81 81.5
HanXRQChr17g0538091 Helianthus annuus HOM05D002388 ORTHO05D008833 2.1e-28 128.6 81 79.0
Manes.04G058600 Manihot esculenta HOM05D002388 ORTHO05D008833 2.1e-28 128.6 79 82.3
Sopen06g021590 Solanum pennellii HOM05D002388 ORTHO05D008833 2.1e-28 128.6 81 80.2
Ah.12g055420 Amaranthus hybridus HOM05D002388 ORTHO05D008833 2.8e-28 128.3 81 79.0
CANSAT21G0073 Cannabis sativa HOM05D002388 ORTHO05D008833 2.8e-28 128.3 81 82.7
AUR62007344 Chenopodium quinoa HOM05D002388 ORTHO05D008833 2.8e-28 128.3 81 84.0
Cc08_g03400 Coffea canephora HOM05D002388 ORTHO05D008833 2.8e-28 128.3 81 80.2
MD06G1025500 Malus domestica HOM05D002388 ORTHO05D008833 2.8e-28 128.3 81 80.2
Medtr2g014320 Medicago truncatula HOM05D002388 ORTHO05D008833 2.8e-28 128.3 78 83.3
Psat4g122960 Pisum sativum HOM05D002388 ORTHO05D008833 2.8e-28 128.3 81 82.7
Lj1g0006191 Lotus japonicus HOM05D002388 ORTHO05D008833 3.6e-28 127.9 81 81.5
Nitab4.5_0000109g0080 Nicotiana tabacum HOM05D002388 ORTHO05D008833 3.6e-28 127.9 81 80.2
RcHm_v2.0_Chr7g0211611 Rosa chinensis HOM05D002388 ORTHO05D008833 3.6e-28 127.9 81 81.5
Thecc.03G308600 Theobroma cacao HOM05D002388 ORTHO05D008833 3.6e-28 127.9 81 82.7
Lalb_Chr05g0225791 Lupinus albus HOM05D002388 ORTHO05D008833 4.7e-28 127.5 81 82.7
Peaxi162Scf00038g00010 Petunia axillaris HOM05D002388 ORTHO05D008833 4.7e-28 127.5 79 82.3
FAN08G0310 Fragaria x ananassa HOM05D002388 ORTHO05D008833 6.1e-28 127.1 81 79.0
MD16G1280900 Malus domestica HOM05D002388 ORTHO05D008833 6.1e-28 127.1 81 80.2
PGSC0003DMG400016784 Solanum tuberosum HOM05D002388 ORTHO05D008833 6.1e-28 127.1 81 79.0
GSVIVG01013070001 Vitis vinifera HOM05D002388 ORTHO05D008833 8.0e-28 126.7 78 82.1
Ciclev10003014m.g Citrus clementina HOM05D002388 ORTHO05D008833 1.0e-27 126.3 81 80.2
TAR119G0002 Trochodendron aralioides HOM05D002388 ORTHO05D008833 1.0e-27 126.3 81 80.2
ATR0564G363 Amborella trichopoda HOM05D002388 ORTHO05D008833 1.4e-27 125.9 81 79.0
Os11g0311550 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 1.4e-27 125.9 79 79.7
Phvul.003G283500 Phaseolus vulgaris HOM05D002388 ORTHO05D008833 1.4e-27 125.9 81 77.8
Duzib068G0043 Durio zibethinus HOM05D002388 ORTHO05D008833 1.8e-27 125.6 81 82.7
ECA246G0855 Erigeron canadensis HOM05D002388 ORTHO05D008833 1.8e-27 125.6 81 77.8
Gohir.D08G175050 Gossypium hirsutum HOM05D002388 ORTHO05D008833 1.8e-27 125.6 81 81.5
Gorai.004G182800 Gossypium raimondii HOM05D002388 ORTHO05D008833 1.8e-27 125.6 81 81.5
TWI60G0513 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 1.8e-27 125.6 81 77.8
TWI81G0136 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 1.8e-27 125.6 81 76.5
EL10Ac5g12027 Beta vulgaris HOM05D002388 ORTHO05D008833 2.3e-27 125.2 81 80.2
Solyc06g066400.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 2.3e-27 125.2 81 77.8
CSS0009097 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 6.8e-27 123.6 80 80.0
Lsat_1_v5_gn_3_19620 Lactuca sativa HOM05D002388 ORTHO05D008833 6.8e-27 123.6 83 75.9
PGSC0003DMG400003487 Solanum tuberosum HOM05D002388 ORTHO05D008833 6.8e-27 123.6 81 80.2
Duzib205G0142 Durio zibethinus HOM05D002388 ORTHO05D008833 1.5e-26 122.5 81 80.2
CDE05G0657 Ceratophyllum demersum HOM05D002388 ORTHO05D008833 2.6e-26 121.7 80 73.8
CSS0006499 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 3.4e-26 121.3 80 78.8
unitig_32.g10897 Utricularia gibba HOM05D002388 ORTHO05D008833 1.7e-25 119.0 81 74.1
THA.LOC104808763 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 6.4e-25 117.1 76 80.3
SEGI_36022 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 5.0e-22 107.5 81 64.2
Mapoly0067s0029 Marchantia polymorpha HOM05D002388 ORTHO05D008833 1.6e-20 102.4 80 61.2
Nn1g00187 Nelumbo nucifera HOM05D002388 ORTHO05D008833 6.2e-20 100.5 57 86.0
PGSC0003DMG400043827 Solanum tuberosum HOM05D002388 ORTHO05D008833 8.0e-20 100.1 81 69.1
AagrBONN_evm.TU.Sc2ySwM_228.4391 Anthoceros agrestis HOM05D003123 ORTHO05D003492 5.2e-19 97.4 76 57.9
BcaB05g24849 Brassica carinata HOM05D002388 ORTHO05D008833 5.8e-18 94.0 50 98.0
Pp3c22_2990 Physcomitrium patens HOM05D002388 ORTHO05D008833 9.8e-18 93.2 80 57.5
ClCG10G001370 Citrullus lanatus HOM05D002388 ORTHO05D008833 6.4e-17 90.5 53 83.0
CSS0023919 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 8.3e-17 90.1 78 65.4
SEGI_14802 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 1.4e-16 89.4 64 65.6
Hund14364 Selenicereus undatus HOM05D002388 ORTHO05D008833 3.2e-16 88.2 51 86.3
Os02g0140101 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 1.6e-15 85.9 49 83.7
arahy.Tifrunner.gnm1.ann1.G961TR Arachis hypogaea HOM05D002388 ORTHO05D008833 3.0e-14 81.6 82 57.3
PGSC0003DMG400016734 Solanum tuberosum HOM05D002388 ORTHO05D008833 1.9e-13 79.0 55 72.7
Peaxi162Scf00218g02111 Petunia axillaris HOM05D004298 ORTHO05D008833 2.9e-09 65.1 39 71.8


User provided reference genes

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